RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 GNAI2P04899 355 aa29.58■■■□□ 2.33
HOXA4-204ENST00000610970 AKAP4Q5JQC9 854 aa29.58■■■□□ 2.33
HOXA4-204ENST00000610970 C1orf167Q5SNV9 1468 aa29.58■■■□□ 2.33
HOXA4-204ENST00000610970 SLC4A10Q6U841 1118 aa29.57■■■□□ 2.32
HOXA4-204ENST00000610970 ANTXR1Q9H6X2 564 aa29.57■■■□□ 2.32
HOXA4-204ENST00000610970 CAMTA1Q9Y6Y1 1673 aa29.57■■■□□ 2.32
HOXA4-204ENST00000610970 NCOA3Q9Y6Q9 1424 aa29.57■■■□□ 2.32
HOXA4-204ENST00000610970 KDM3BQ7LBC6 1761 aa29.56■■■□□ 2.32
HOXA4-204ENST00000610970 TTC22Q5TAA0 569 aa29.56■■■□□ 2.32
HOXA4-204ENST00000610970 SNX21Q969T3 373 aa29.56■■■□□ 2.32
HOXA4-204ENST00000610970 FKBP5Q13451 457 aaPredicted RBP29.55■■■□□ 2.32
HOXA4-204ENST00000610970 TBC1D9Q6ZT07 1266 aa29.55■■■□□ 2.32
HOXA4-204ENST00000610970 KRT28Q7Z3Y7 464 aa29.55■■■□□ 2.32
HOXA4-204ENST00000610970 F6X3S4 739 aa29.54■■■□□ 2.32
HOXA4-204ENST00000610970 ILDR1Q86SU0 546 aaPredicted RBP29.54■■■□□ 2.32
HOXA4-204ENST00000610970 RGPD2P0DJD1 1756 aa29.54■■■□□ 2.32
HOXA4-204ENST00000610970 HSCBQ8IWL3 235 aa29.53■■■□□ 2.32
HOXA4-204ENST00000610970 DCCP43146 1447 aa29.52■■■□□ 2.32
HOXA4-204ENST00000610970 HDGFL1Q5TGJ6 251 aa29.51■■■□□ 2.32
HOXA4-204ENST00000610970 EIF4A1P60842 406 aaKnown RBP29.51■■■□□ 2.31
HOXA4-204ENST00000610970 GSPT1P15170 499 aaKnown RBP29.5■■■□□ 2.31
HOXA4-204ENST00000610970 ZNF530Q6P9A1 599 aaPredicted RBP29.5■■■□□ 2.31
HOXA4-204ENST00000610970 ALS2Q96Q42 1657 aa29.49■■■□□ 2.31
HOXA4-204ENST00000610970 TEFQ10587 303 aa29.48■■■□□ 2.31
HOXA4-204ENST00000610970 ANKRD24Q8TF21 1146 aa29.48■■■□□ 2.31
HOXA4-204ENST00000610970 ZBTB7CA1YPR0 619 aa29.48■■■□□ 2.31
HOXA4-204ENST00000610970 FRAT2O75474 233 aaPredicted RBP29.48■■■□□ 2.31
HOXA4-204ENST00000610970 OSBPL3Q9H4L5 887 aa29.48■■■□□ 2.31
HOXA4-204ENST00000610970 ATP8B2P98198 1209 aa29.47■■■□□ 2.31
HOXA4-204ENST00000610970 C1orf141Q5JVX7 400 aa29.47■■■□□ 2.31
HOXA4-204ENST00000610970 SLKQ9H2G2 1235 aaPredicted RBP29.47■■■□□ 2.31
HOXA4-204ENST00000610970 LRRC59Q96AG4 307 aaKnown RBP29.46■■■□□ 2.31
HOXA4-204ENST00000610970 LGR6Q9HBX8 967 aa29.46■■■□□ 2.31
HOXA4-204ENST00000610970 CASC1Q6TDU7 716 aa29.45■■■□□ 2.31
HOXA4-204ENST00000610970 FBXO41Q8TF61 875 aa29.45■■■□□ 2.31
HOXA4-204ENST00000610970 RNMTO43148 476 aaKnown RBP29.44■■■□□ 2.3
HOXA4-204ENST00000610970 CHMP5Q9NZZ3 219 aa29.44■■■□□ 2.3
HOXA4-204ENST00000610970 TMEM94Q12767 1356 aa29.44■■■□□ 2.3
HOXA4-204ENST00000610970 ATF3P18847 181 aa29.43■■■□□ 2.3
HOXA4-204ENST00000610970 XPCQ01831 940 aaPredicted RBP29.43■■■□□ 2.3
HOXA4-204ENST00000610970 GSE1Q14687 1217 aa29.43■■■□□ 2.3
HOXA4-204ENST00000610970 LMOD2Q6P5Q4 547 aa29.43■■■□□ 2.3
HOXA4-204ENST00000610970 C16orf71Q8IYS4 520 aaPredicted RBP29.43■■■□□ 2.3
HOXA4-204ENST00000610970 PLEKHG2Q9H7P9 1386 aa29.43■■■□□ 2.3
HOXA4-204ENST00000610970 BTBD11A6QL63 1104 aa29.42■■■□□ 2.3
HOXA4-204ENST00000610970 NECTIN2Q92692 538 aa29.42■■■□□ 2.3
HOXA4-204ENST00000610970 ABCC6O95255 1503 aa29.41■■■□□ 2.3
HOXA4-204ENST00000610970 ADAMTS7Q9UKP4 1686 aa29.41■■■□□ 2.3
HOXA4-204ENST00000610970 KIF2CQ99661 725 aa29.4■■■□□ 2.3
HOXA4-204ENST00000610970 SMARCA5O60264 1052 aaPredicted RBP29.39■■■□□ 2.3
HOXA4-204ENST00000610970 UBTFL1P0CB47 393 aaPredicted RBP29.39■■■□□ 2.3
HOXA4-204ENST00000610970 LRRCC1Q9C099 1032 aa29.39■■■□□ 2.3
HOXA4-204ENST00000610970 SRCIN1Q9C0H9 1055 aa29.39■■■□□ 2.3
HOXA4-204ENST00000610970 USP44Q9H0E7 712 aa29.39■■■□□ 2.3
HOXA4-204ENST00000610970 SDSP20132 328 aa29.37■■■□□ 2.29
HOXA4-204ENST00000610970 IBTKQ9P2D0 1353 aaPredicted RBP29.37■■■□□ 2.29
HOXA4-204ENST00000610970 MPRIPQ6WCQ1 1025 aa29.37■■■□□ 2.29
HOXA4-204ENST00000610970 OTUD7AQ8TE49 926 aaPredicted RBP29.37■■■□□ 2.29
HOXA4-204ENST00000610970 SIPA1L3O60292 1781 aaPredicted RBP29.37■■■□□ 2.29
HOXA4-204ENST00000610970 HEG1Q9ULI3 1381 aa29.36■■■□□ 2.29
HOXA4-204ENST00000610970 ERBB3P21860 1342 aa29.36■■■□□ 2.29
HOXA4-204ENST00000610970 PDE1AP54750 535 aa29.36■■■□□ 2.29
HOXA4-204ENST00000610970 PHAXQ9H814 394 aaKnown RBP29.36■■■□□ 2.29
HOXA4-204ENST00000610970 PXDNQ92626 1479 aa29.36■■■□□ 2.29
HOXA4-204ENST00000610970 DBF4Q9UBU7 674 aaPredicted RBP29.35■■■□□ 2.29
HOXA4-204ENST00000610970 CIZ1Q9ULV3 898 aaPredicted RBP29.35■■■□□ 2.29
HOXA4-204ENST00000610970 AXIN2Q9Y2T1 843 aa29.35■■■□□ 2.29
HOXA4-204ENST00000610970 LRRFIP2Q9Y608 721 aaKnown RBP29.35■■■□□ 2.29
HOXA4-204ENST00000610970 EIF2S2P20042 333 aaKnown RBP29.34■■■□□ 2.29
HOXA4-204ENST00000610970 CADPS2Q86UW7 1296 aa29.34■■■□□ 2.29
HOXA4-204ENST00000610970 XIRP1Q702N8 1843 aaKnown RBP29.34■■■□□ 2.29
HOXA4-204ENST00000610970 RGPD5Q99666 1765 aa29.34■■■□□ 2.29
HOXA4-204ENST00000610970 SSH3Q8TE77 659 aa29.34■■■□□ 2.29
HOXA4-204ENST00000610970 DNAAF4Q8WXU2 420 aa29.34■■■□□ 2.29
HOXA4-204ENST00000610970 SALL3Q9BXA9 1300 aa29.33■■■□□ 2.29
HOXA4-204ENST00000610970 APBB1O00213 710 aa29.33■■■□□ 2.29
HOXA4-204ENST00000610970 RAB11FIP3O75154 756 aa29.33■■■□□ 2.29
HOXA4-204ENST00000610970 CHPF2Q9P2E5 772 aa29.33■■■□□ 2.29
HOXA4-204ENST00000610970 AOX1Q06278 1338 aa29.32■■■□□ 2.28
HOXA4-204ENST00000610970 NPHP3Q7Z494 1330 aa29.32■■■□□ 2.28
HOXA4-204ENST00000610970 REC8O95072 547 aa29.32■■■□□ 2.28
HOXA4-204ENST00000610970 RABEP1Q15276 862 aa29.32■■■□□ 2.28
HOXA4-204ENST00000610970 USP26Q9BXU7 913 aa29.32■■■□□ 2.28
HOXA4-204ENST00000610970 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.32■■■□□ 2.28
HOXA4-204ENST00000610970 PNMA6EA0A0J9YXQ4 647 aa29.31■■■□□ 2.28
HOXA4-204ENST00000610970 HDAC5Q9UQL6 1122 aa29.31■■■□□ 2.28
HOXA4-204ENST00000610970 HSP90AB1P08238 724 aaKnown RBP29.31■■■□□ 2.28
HOXA4-204ENST00000610970 DDIT3P35638 169 aa29.31■■■□□ 2.28
HOXA4-204ENST00000610970 STAP2Q9UGK3 403 aa29.31■■■□□ 2.28
HOXA4-204ENST00000610970 EXOC6BQ9Y2D4 811 aa29.31■■■□□ 2.28
HOXA4-204ENST00000610970 KCNQ3O43525 872 aa29.3■■■□□ 2.28
HOXA4-204ENST00000610970 BEND3Q5T5X7 828 aa29.3■■■□□ 2.28
HOXA4-204ENST00000610970 GIGYF1O75420 1035 aaPredicted RBP29.29■■■□□ 2.28
HOXA4-204ENST00000610970 POLA2Q14181 598 aa29.29■■■□□ 2.28
HOXA4-204ENST00000610970 COL18A1P39060 1754 aa29.29■■■□□ 2.28
HOXA4-204ENST00000610970 K7ELQ4 463 aaPredicted RBP29.28■■■□□ 2.28
HOXA4-204ENST00000610970 RAPGEF4Q8WZA2 1011 aa29.28■■■□□ 2.28
HOXA4-204ENST00000610970 TNS3Q68CZ2 1445 aa29.27■■■□□ 2.28
HOXA4-204ENST00000610970 ALDH1L1O75891 902 aa29.27■■■□□ 2.28
HOXA4-204ENST00000610970 MX1P20591 662 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms