RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 PPP1R42Q7Z4L9 355 aa8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 SIRT2Q8IXJ6 389 aa8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 USP25Q9UHP3 1055 aa8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 BECN2A8MW95 431 aa8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 GOLGA6L19H0YKK7 550 aa8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 NEUROD6Q96NK8 337 aa8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 NLRP2Q9NX02 1062 aa8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 AMOTL2Q9Y2J4 779 aa8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 CYP46A1Q9Y6A2 500 aa8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 DIP2BQ9P265 1576 aa8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 MYL6BP14649 208 aa8.23□□□□□ -1.09
SYNPO2-206ENST00000610556 DNAJC2Q99543 621 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-206ENST00000610556 ESYT1Q9BSJ8 1104 aa8.23□□□□□ -1.09
SYNPO2-206ENST00000610556 MSH6P52701 1360 aa8.23□□□□□ -1.09
SYNPO2-206ENST00000610556 ABCC1P33527 1531 aa8.23□□□□□ -1.09
SYNPO2-206ENST00000610556 TAF7LQ5H9L4 462 aa8.23□□□□□ -1.09
SYNPO2-206ENST00000610556 LARP1BQ659C4 914 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-206ENST00000610556 PDRG1Q9NUG6 133 aa8.23□□□□□ -1.09
SYNPO2-206ENST00000610556 PI4KAP2A4QPH2 592 aa8.23□□□□□ -1.09
SYNPO2-206ENST00000610556 RRP9O43818 475 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-206ENST00000610556 MPRIPQ6WCQ1 1025 aa8.23□□□□□ -1.09
SYNPO2-206ENST00000610556 PI4KAP1Q8N8J0 262 aa8.23□□□□□ -1.09
SYNPO2-206ENST00000610556 KIF1BPQ96EK5 621 aa8.23□□□□□ -1.09
SYNPO2-206ENST00000610556 ZNF830Q96NB3 372 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-206ENST00000610556 BTBD11A6QL63 1104 aa8.22□□□□□ -1.09
SYNPO2-206ENST00000610556 NRDCO43847 1150 aa8.22□□□□□ -1.09
SYNPO2-206ENST00000610556 CAMK4Q16566 473 aa8.22□□□□□ -1.09
SYNPO2-206ENST00000610556 RBSNQ9H1K0 784 aa8.22□□□□□ -1.09
SYNPO2-206ENST00000610556 IQGAP3Q86VI3 1631 aa8.22□□□□□ -1.09
SYNPO2-206ENST00000610556 TTC5Q8N0Z6 440 aa8.22□□□□□ -1.09
SYNPO2-206ENST00000610556 CCDC8Q9H0W5 538 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-206ENST00000610556 SASS6Q6UVJ0 657 aa8.22□□□□□ -1.09
SYNPO2-206ENST00000610556 TCEANC2Q96MN5 208 aa8.22□□□□□ -1.09
SYNPO2-206ENST00000610556 TRIM5Q9C035 493 aa8.22□□□□□ -1.09
SYNPO2-206ENST00000610556 BOLA2Q9H3K6 86 aa8.22□□□□□ -1.09
SYNPO2-206ENST00000610556 CLTCL1P53675 1640 aa8.22□□□□□ -1.09
SYNPO2-206ENST00000610556 POLR1AO95602 1720 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-206ENST00000610556 FSD2A1L4K1 749 aa8.22□□□□□ -1.09
SYNPO2-206ENST00000610556 CHL1O00533 1208 aa8.21□□□□□ -1.09
SYNPO2-206ENST00000610556 KDM4AO75164 1064 aa8.21□□□□□ -1.09
SYNPO2-206ENST00000610556 CPA1P15085 419 aa8.21□□□□□ -1.09
SYNPO2-206ENST00000610556 PLEKHO1Q53GL0 409 aaPredicted RBP8.21□□□□□ -1.09
SYNPO2-206ENST00000610556 RAPGEF4Q8WZA2 1011 aa8.21□□□□□ -1.09
SYNPO2-206ENST00000610556 PNMA6EA0A0J9YXQ4 647 aa8.21□□□□□ -1.1
SYNPO2-206ENST00000610556 HCLS1P14317 486 aaPredicted RBP8.21□□□□□ -1.1
SYNPO2-206ENST00000610556 RHPN1Q8TCX5 695 aa8.21□□□□□ -1.1
SYNPO2-206ENST00000610556 DNAAF4Q8WXU2 420 aa8.21□□□□□ -1.1
SYNPO2-206ENST00000610556 EYA1Q99502 592 aa8.21□□□□□ -1.1
SYNPO2-206ENST00000610556 ABCC4O15439 1325 aa8.21□□□□□ -1.1
SYNPO2-206ENST00000610556 RIMS2Q9UQ26 1411 aa8.21□□□□□ -1.1
SYNPO2-206ENST00000610556 PPFIA3O75145 1194 aa8.21□□□□□ -1.1
SYNPO2-206ENST00000610556 PSMA5P28066 241 aa8.21□□□□□ -1.1
SYNPO2-206ENST00000610556 NCBP3Q53F19 620 aaKnown RBP8.21□□□□□ -1.1
SYNPO2-206ENST00000610556 LRSAM1Q6UWE0 723 aa8.21□□□□□ -1.1
SYNPO2-206ENST00000610556 DDX11Q96FC9 970 aa8.21□□□□□ -1.1
SYNPO2-206ENST00000610556 PHAXQ9H814 394 aaKnown RBP8.21□□□□□ -1.1
SYNPO2-206ENST00000610556 MAP3K19Q56UN5 1328 aa8.21□□□□□ -1.1
SYNPO2-206ENST00000610556 MYOM2P54296 1465 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 UNC13BO14795 1591 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 INO80Q9ULG1 1556 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 GLRX3O76003 335 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 BLOC1S2Q6QNY1 142 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 NECAB1Q8N987 351 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 JARID2Q92833 1246 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 TFIP11Q9UBB9 837 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 LIMCH1Q9UPQ0 1083 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 ZFYVE9O95405 1425 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 DEPDC5O75140 1603 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 CHMLP26374 656 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 ATP8B2P98198 1209 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 GIMAP6Q6P9H5 292 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 USP48Q86UV5 1035 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 CNPY2Q9Y2B0 182 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 RAB11FIP3O75154 756 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 KRT85P78386 507 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 TOMM22Q9NS69 142 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 LMBRD1Q9NUN5 540 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 CHPF2Q9P2E5 772 aa8.2□□□□□ -1.1
SYNPO2-206ENST00000610556 STX6O43752 255 aa8.19□□□□□ -1.1
SYNPO2-206ENST00000610556 CCDC192P0DO97 292 aa8.19□□□□□ -1.1
SYNPO2-206ENST00000610556 ZC3H6P61129 1189 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-206ENST00000610556 KIF3AQ9Y496 699 aa8.19□□□□□ -1.1
SYNPO2-206ENST00000610556 MADDQ8WXG6 1647 aa8.19□□□□□ -1.1
SYNPO2-206ENST00000610556 POGZQ7Z3K3 1410 aa8.19□□□□□ -1.1
SYNPO2-206ENST00000610556 PDCP20941 246 aa8.19□□□□□ -1.1
SYNPO2-206ENST00000610556 CKAP2LQ8IYA6 745 aa8.19□□□□□ -1.1
SYNPO2-206ENST00000610556 FMNL2Q96PY5 1086 aa8.19□□□□□ -1.1
SYNPO2-206ENST00000610556 TNMDQ9H2S6 317 aa8.19□□□□□ -1.1
SYNPO2-206ENST00000610556 PA2G4Q9UQ80 394 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-206ENST00000610556 ZFYVE16Q7Z3T8 1539 aa8.19□□□□□ -1.1
SYNPO2-206ENST00000610556 PLXNC1O60486 1568 aa8.19□□□□□ -1.1
SYNPO2-206ENST00000610556 LETM1O95202 739 aaPredicted RBP8.19□□□□□ -1.1
SYNPO2-206ENST00000610556 ERC1Q8IUD2 1116 aa8.19□□□□□ -1.1
SYNPO2-206ENST00000610556 GJB2P29033 226 aa8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 CCDC183Q5T5S1 534 aa8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 TTC12Q9H892 705 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 TMEM63CQ9P1W3 806 aa8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 PALD1Q9ULE6 856 aa8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 ADCY5O95622 1261 aa8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 CCDC73Q6ZRK6 1079 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms