RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 CCDC39Q9UFE4 941 aa20.62■□□□□ 0.89
TNIP1-220ENST00000610535 CCDC61Q9Y6R9 512 aa20.62■□□□□ 0.89
TNIP1-220ENST00000610535 MPNDQ8N594 471 aa20.61■□□□□ 0.89
TNIP1-220ENST00000610535 RILPL2Q969X0 211 aa20.61■□□□□ 0.89
TNIP1-220ENST00000610535 UPF3BQ9BZI7 483 aaKnown RBP20.61■□□□□ 0.89
TNIP1-220ENST00000610535 ANO2Q9NQ90 1003 aa20.61■□□□□ 0.89
TNIP1-220ENST00000610535 KIAA0232Q92628 1395 aa20.61■□□□□ 0.89
TNIP1-220ENST00000610535 CUL4AQ13619 759 aa20.61■□□□□ 0.89
TNIP1-220ENST00000610535 GADD45BO75293 160 aaPredicted RBP20.6■□□□□ 0.89
TNIP1-220ENST00000610535 TPRNQ4KMQ1 711 aa20.6■□□□□ 0.89
TNIP1-220ENST00000610535 TRIM6-TRIM34B2RNG4 842 aa20.6■□□□□ 0.89
TNIP1-220ENST00000610535 SOX12O15370 315 aa20.6■□□□□ 0.89
TNIP1-220ENST00000610535 FOXO3O43524 673 aa20.6■□□□□ 0.89
TNIP1-220ENST00000610535 HSP90AB2PQ58FF8 381 aa20.59■□□□□ 0.89
TNIP1-220ENST00000610535 TSPY26PQ9H489 355 aa20.59■□□□□ 0.89
TNIP1-220ENST00000610535 MCM5P33992 734 aa20.59■□□□□ 0.89
TNIP1-220ENST00000610535 SLC26A8Q96RN1 970 aa20.59■□□□□ 0.89
TNIP1-220ENST00000610535 PTMAP06454 111 aaKnown RBP20.58■□□□□ 0.89
TNIP1-220ENST00000610535 MCM2P49736 904 aa20.58■□□□□ 0.89
TNIP1-220ENST00000610535 CSPP1Q1MSJ5 1256 aa20.58■□□□□ 0.89
TNIP1-220ENST00000610535 CHMLP26374 656 aa20.58■□□□□ 0.88
TNIP1-220ENST00000610535 MX1P20591 662 aa20.57■□□□□ 0.88
TNIP1-220ENST00000610535 DLC1Q96QB1 1528 aa20.57■□□□□ 0.88
TNIP1-220ENST00000610535 SALL3Q9BXA9 1300 aa20.57■□□□□ 0.88
TNIP1-220ENST00000610535 PNMA6EA0A0J9YXQ4 647 aa20.57■□□□□ 0.88
TNIP1-220ENST00000610535 GNAI2P04899 355 aa20.57■□□□□ 0.88
TNIP1-220ENST00000610535 UNC5CLQ8IV45 518 aa20.57■□□□□ 0.88
TNIP1-220ENST00000610535 LRRCC1Q9C099 1032 aa20.57■□□□□ 0.88
TNIP1-220ENST00000610535 MCCP23508 829 aa20.56■□□□□ 0.88
TNIP1-220ENST00000610535 CCT4P50991 539 aaKnown RBP20.56■□□□□ 0.88
TNIP1-220ENST00000610535 TSPYL4Q9UJ04 414 aa20.55■□□□□ 0.88
TNIP1-220ENST00000610535 USP48Q86UV5 1035 aa20.55■□□□□ 0.88
TNIP1-220ENST00000610535 INTS4Q96HW7 963 aaKnown RBP20.55■□□□□ 0.88
TNIP1-220ENST00000610535 IL25Q9H293 177 aa20.55■□□□□ 0.88
TNIP1-220ENST00000610535 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.55■□□□□ 0.88
TNIP1-220ENST00000610535 CRB1P82279 1406 aa20.55■□□□□ 0.88
TNIP1-220ENST00000610535 PRR36Q9H6K5 1346 aa20.54■□□□□ 0.88
TNIP1-220ENST00000610535 ZNF830Q96NB3 372 aaPredicted RBP20.54■□□□□ 0.88
TNIP1-220ENST00000610535 NECTIN2Q92692 538 aa20.54■□□□□ 0.88
TNIP1-220ENST00000610535 SASS6Q6UVJ0 657 aa20.53■□□□□ 0.88
TNIP1-220ENST00000610535 ANAPC15P60006 121 aa20.52■□□□□ 0.88
TNIP1-220ENST00000610535 SYAP1Q96A49 352 aaPredicted RBP20.52■□□□□ 0.88
TNIP1-220ENST00000610535 DYNC1I1O14576 645 aa20.52■□□□□ 0.87
TNIP1-220ENST00000610535 MTHFSDQ2M296 383 aaKnown RBP20.52■□□□□ 0.87
TNIP1-220ENST00000610535 TRHP20396 242 aaPredicted RBP20.51■□□□□ 0.87
TNIP1-220ENST00000610535 LTKP29376 864 aa20.51■□□□□ 0.87
TNIP1-220ENST00000610535 JARID2Q92833 1246 aaPredicted RBP20.51■□□□□ 0.87
TNIP1-220ENST00000610535 MAP7D2Q96T17 732 aa20.51■□□□□ 0.87
TNIP1-220ENST00000610535 LARP6Q9BRS8 491 aaKnown RBP20.5■□□□□ 0.87
TNIP1-220ENST00000610535 IL1RAPL2Q9NP60 686 aa20.5■□□□□ 0.87
TNIP1-220ENST00000610535 ATP8B2P98198 1209 aa20.5■□□□□ 0.87
TNIP1-220ENST00000610535 KIAA2012Q0VF49 1180 aa20.5■□□□□ 0.87
TNIP1-220ENST00000610535 FKBP5Q13451 457 aaPredicted RBP20.5■□□□□ 0.87
TNIP1-220ENST00000610535 RTF1Q92541 710 aaKnown RBP20.5■□□□□ 0.87
TNIP1-220ENST00000610535 KIF13AQ9H1H9 1805 aa20.5■□□□□ 0.87
TNIP1-220ENST00000610535 TTC21BQ7Z4L5 1316 aa20.49■□□□□ 0.87
TNIP1-220ENST00000610535 MAP4K4O95819 1239 aaPredicted RBP20.49■□□□□ 0.87
TNIP1-220ENST00000610535 USP25Q9UHP3 1055 aa20.49■□□□□ 0.87
TNIP1-220ENST00000610535 DNTTIP2Q5QJE6 756 aaKnown RBP20.49■□□□□ 0.87
TNIP1-220ENST00000610535 SRCIN1Q9C0H9 1055 aa20.49■□□□□ 0.87
TNIP1-220ENST00000610535 TNRQ92752 1358 aa20.49■□□□□ 0.87
TNIP1-220ENST00000610535 MAP3K19Q56UN5 1328 aa20.49■□□□□ 0.87
TNIP1-220ENST00000610535 STK31Q9BXU1 1019 aa20.48■□□□□ 0.87
TNIP1-220ENST00000610535 LRRFIP2Q9Y608 721 aaKnown RBP20.48■□□□□ 0.87
TNIP1-220ENST00000610535 WDR33Q9C0J8 1336 aaKnown RBP20.48■□□□□ 0.87
TNIP1-220ENST00000610535 PPP6R1Q9UPN7 881 aa20.48■□□□□ 0.87
TNIP1-220ENST00000610535 AGLP35573 1532 aa20.48■□□□□ 0.87
TNIP1-220ENST00000610535 TCHHQ07283 1943 aa20.48■□□□□ 0.87
TNIP1-220ENST00000610535 FLIIQ13045 1269 aa20.47■□□□□ 0.87
TNIP1-220ENST00000610535 NUTM1Q86Y26 1132 aa20.47■□□□□ 0.87
TNIP1-220ENST00000610535 CNPY2Q9Y2B0 182 aa20.47■□□□□ 0.87
TNIP1-220ENST00000610535 SETD1AO15047 1707 aaKnown RBP20.47■□□□□ 0.87
TNIP1-220ENST00000610535 DTNBO60941 627 aa20.47■□□□□ 0.87
TNIP1-220ENST00000610535 C17orf53Q8N3J3 647 aaPredicted RBP20.47■□□□□ 0.87
TNIP1-220ENST00000610535 STAP2Q9UGK3 403 aa20.47■□□□□ 0.87
TNIP1-220ENST00000610535 SPATA31D1Q6ZQQ2 1576 aa20.47■□□□□ 0.87
TNIP1-220ENST00000610535 MON2Q7Z3U7 1717 aa20.47■□□□□ 0.87
TNIP1-220ENST00000610535 PHF14O94880 888 aa20.47■□□□□ 0.87
TNIP1-220ENST00000610535 GNAI3P08754 354 aa20.47■□□□□ 0.87
TNIP1-220ENST00000610535 TSC1Q92574 1164 aa20.47■□□□□ 0.87
TNIP1-220ENST00000610535 TTC12Q9H892 705 aaPredicted RBP20.46■□□□□ 0.87
TNIP1-220ENST00000610535 ACEP12821 1306 aa20.46■□□□□ 0.87
TNIP1-220ENST00000610535 C3P01024 1663 aa20.46■□□□□ 0.87
TNIP1-220ENST00000610535 HSPA4P34932 840 aa20.45■□□□□ 0.86
TNIP1-220ENST00000610535 HCLS1P14317 486 aaPredicted RBP20.45■□□□□ 0.86
TNIP1-220ENST00000610535 NRKQ7Z2Y5 1582 aa20.45■□□□□ 0.86
TNIP1-220ENST00000610535 ADCY5O95622 1261 aa20.44■□□□□ 0.86
TNIP1-220ENST00000610535 RPAP1Q9BWH6 1393 aaPredicted RBP20.43■□□□□ 0.86
TNIP1-220ENST00000610535 RBM33Q96EV2 1170 aaKnown RBP20.43■□□□□ 0.86
TNIP1-220ENST00000610535 ROBO2Q9HCK4 1378 aa20.43■□□□□ 0.86
TNIP1-220ENST00000610535 IL17RAQ96F46 866 aa20.43■□□□□ 0.86
TNIP1-220ENST00000610535 PRDM10Q9NQV6 1147 aa20.43■□□□□ 0.86
TNIP1-220ENST00000610535 SSH2Q76I76 1423 aa20.43■□□□□ 0.86
TNIP1-220ENST00000610535 NOLC1Q14978 699 aaKnown RBP eCLIP20.42■□□□□ 0.86
TNIP1-220ENST00000610535 USP44Q9H0E7 712 aa20.42■□□□□ 0.86
TNIP1-220ENST00000610535 TUBGCP6Q96RT7 1819 aa20.42■□□□□ 0.86
TNIP1-220ENST00000610535 CCDC183Q5T5S1 534 aa20.42■□□□□ 0.86
TNIP1-220ENST00000610535 FAM184AQ8NB25 1140 aa20.42■□□□□ 0.86
TNIP1-220ENST00000610535 UVSSAQ2YD98 709 aa20.41■□□□□ 0.86
TNIP1-220ENST00000610535 RASEFQ8IZ41 740 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms