RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 KDM6AO15550 1401 aaPredicted RBP23.51■■□□□ 1.35
PRKN-208ENST00000610470 CABP4P57796 275 aa23.51■■□□□ 1.35
PRKN-208ENST00000610470 LINC00116Q8NCU8 138 aa23.51■■□□□ 1.35
PRKN-208ENST00000610470 SSFA2P28290 1259 aa23.5■■□□□ 1.35
PRKN-208ENST00000610470 MSL1Q68DK7 614 aa23.5■■□□□ 1.35
PRKN-208ENST00000610470 PHF14O94880 888 aa23.49■■□□□ 1.35
PRKN-208ENST00000610470 ITPK1Q13572 414 aa23.49■■□□□ 1.35
PRKN-208ENST00000610470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.48■■□□□ 1.35
PRKN-208ENST00000610470 DIAPH1O60610 1272 aaKnown RBP23.48■■□□□ 1.35
PRKN-208ENST00000610470 UBR3Q6ZT12 1888 aa23.47■■□□□ 1.35
PRKN-208ENST00000610470 RBM42Q9BTD8 480 aaKnown RBP23.47■■□□□ 1.35
PRKN-208ENST00000610470 UTRNP46939 3433 aa23.47■■□□□ 1.35
PRKN-208ENST00000610470 GNPATO15228 680 aa23.46■■□□□ 1.35
PRKN-208ENST00000610470 AKAP4Q5JQC9 854 aa23.46■■□□□ 1.35
PRKN-208ENST00000610470 AMIGO3Q86WK7 504 aa23.46■■□□□ 1.35
PRKN-208ENST00000610470 HMOX1P09601 288 aa23.45■■□□□ 1.34
PRKN-208ENST00000610470 CNGB1Q14028 1251 aaPredicted RBP23.45■■□□□ 1.34
PRKN-208ENST00000610470 GPR162Q16538 588 aa23.45■■□□□ 1.34
PRKN-208ENST00000610470 ZNF831Q5JPB2 1677 aa23.44■■□□□ 1.34
PRKN-208ENST00000610470 SMIM5Q71RC9 77 aa23.43■■□□□ 1.34
PRKN-208ENST00000610470 NFATC2IPQ8NCF5 419 aa23.43■■□□□ 1.34
PRKN-208ENST00000610470 NLGN2Q8NFZ4 835 aa23.43■■□□□ 1.34
PRKN-208ENST00000610470 SLC4A9Q96Q91 983 aa23.42■■□□□ 1.34
PRKN-208ENST00000610470 RC3H1Q5TC82 1133 aaKnown RBP23.41■■□□□ 1.34
PRKN-208ENST00000610470 RTCBQ9Y3I0 505 aaKnown RBP23.41■■□□□ 1.34
PRKN-208ENST00000610470 PELP1Q8IZL8 1130 aaKnown RBP23.4■■□□□ 1.34
PRKN-208ENST00000610470 CD2APQ9Y5K6 639 aa23.4■■□□□ 1.34
PRKN-208ENST00000610470 CNTNAP4Q9C0A0 1308 aa23.39■■□□□ 1.34
PRKN-208ENST00000610470 COL3A1P02461 1466 aaPredicted RBP23.39■■□□□ 1.34
PRKN-208ENST00000610470 TRAPPC3LQ5T215 181 aa23.39■■□□□ 1.33
PRKN-208ENST00000610470 SCN11AQ9UI33 1791 aa23.39■■□□□ 1.33
PRKN-208ENST00000610470 PTCD1O75127 700 aaKnown RBP23.38■■□□□ 1.33
PRKN-208ENST00000610470 SLC52A2Q9HAB3 445 aa23.38■■□□□ 1.33
PRKN-208ENST00000610470 U2SURPO15042 1029 aaKnown RBP23.37■■□□□ 1.33
PRKN-208ENST00000610470 ADRA2BP18089 450 aa23.37■■□□□ 1.33
PRKN-208ENST00000610470 MTHFSDQ2M296 383 aaKnown RBP23.37■■□□□ 1.33
PRKN-208ENST00000610470 COL5A3P25940 1745 aaPredicted RBP23.36■■□□□ 1.33
PRKN-208ENST00000610470 RNMTO43148 476 aaKnown RBP23.36■■□□□ 1.33
PRKN-208ENST00000610470 CFAP53Q96M91 514 aa23.36■■□□□ 1.33
PRKN-208ENST00000610470 LGR6Q9HBX8 967 aa23.36■■□□□ 1.33
PRKN-208ENST00000610470 RPS6KA4O75676 772 aa23.35■■□□□ 1.33
PRKN-208ENST00000610470 CHD4Q14839 1912 aa23.35■■□□□ 1.33
PRKN-208ENST00000610470 MRC1P22897 1456 aa23.34■■□□□ 1.33
PRKN-208ENST00000610470 GRIN3BO60391 1043 aa23.33■■□□□ 1.33
PRKN-208ENST00000610470 GOLGB1Q14789 3259 aaKnown RBP23.33■■□□□ 1.32
PRKN-208ENST00000610470 RFC4P35249 363 aa23.32■■□□□ 1.32
PRKN-208ENST00000610470 NLGN1Q8N2Q7 840 aa23.32■■□□□ 1.32
PRKN-208ENST00000610470 ARHGEF1Q92888 912 aaKnown RBP23.32■■□□□ 1.32
PRKN-208ENST00000610470 CRKLP46109 303 aaKnown RBP23.31■■□□□ 1.32
PRKN-208ENST00000610470 GAS2L2Q8NHY3 880 aa23.31■■□□□ 1.32
PRKN-208ENST00000610470 CICQ96RK0 1608 aaPredicted RBP23.3■■□□□ 1.32
PRKN-208ENST00000610470 MMP10P09238 476 aa23.3■■□□□ 1.32
PRKN-208ENST00000610470 YBX3P16989 372 aaKnown RBP eCLIP23.3■■□□□ 1.32
PRKN-208ENST00000610470 ZNF784Q8NCA9 323 aaPredicted RBP23.3■■□□□ 1.32
PRKN-208ENST00000610470 NUDCQ9Y266 331 aa23.3■■□□□ 1.32
PRKN-208ENST00000610470 ADAMTS7Q9UKP4 1686 aa23.29■■□□□ 1.32
PRKN-208ENST00000610470 TJP1Q07157 1748 aa23.28■■□□□ 1.32
PRKN-208ENST00000610470 PPP2R1AP30153 589 aa23.28■■□□□ 1.32
PRKN-208ENST00000610470 SLC39A6Q13433 755 aa23.28■■□□□ 1.32
PRKN-208ENST00000610470 MYH14Q7Z406 1995 aaKnown RBP23.28■■□□□ 1.32
PRKN-208ENST00000610470 VIRMAQ69YN4 1812 aaKnown RBP23.27■■□□□ 1.32
PRKN-208ENST00000610470 GNAT3A8MTJ3 354 aa23.27■■□□□ 1.32
PRKN-208ENST00000610470 GYS1P13807 737 aa23.27■■□□□ 1.32
PRKN-208ENST00000610470 DNAJC10Q8IXB1 793 aa23.26■■□□□ 1.31
PRKN-208ENST00000610470 PRKAR2BP31323 418 aa23.24■■□□□ 1.31
PRKN-208ENST00000610470 TEFQ10587 303 aa23.24■■□□□ 1.31
PRKN-208ENST00000610470 INTS5Q6P9B9 1019 aaKnown RBP23.24■■□□□ 1.31
PRKN-208ENST00000610470 VSIG10Q8N0Z9 540 aa23.24■■□□□ 1.31
PRKN-208ENST00000610470 RSPH6AQ9H0K4 717 aa23.24■■□□□ 1.31
PRKN-208ENST00000610470 CCDC87Q9NVE4 849 aa23.24■■□□□ 1.31
PRKN-208ENST00000610470 KCPQ6ZWJ8 1503 aa23.23■■□□□ 1.31
PRKN-208ENST00000610470 TTC5Q8N0Z6 440 aa23.23■■□□□ 1.31
PRKN-208ENST00000610470 PARP3Q9Y6F1 533 aa23.23■■□□□ 1.31
PRKN-208ENST00000610470 C4AP0C0L4 1744 aa23.22■■□□□ 1.31
PRKN-208ENST00000610470 U2AF1L5P0DN76 240 aaPredicted RBP23.22■■□□□ 1.31
PRKN-208ENST00000610470 CYP19A1P11511 503 aaPredicted RBP23.22■■□□□ 1.31
PRKN-208ENST00000610470 U2AF1Q01081 240 aaKnown RBP eCLIP23.22■■□□□ 1.31
PRKN-208ENST00000610470 IL17REQ8NFR9 667 aa23.22■■□□□ 1.31
PRKN-208ENST00000610470 USP42Q9H9J4 1324 aaKnown RBP23.22■■□□□ 1.31
PRKN-208ENST00000610470 TGFB2P61812 414 aa23.2■■□□□ 1.3
PRKN-208ENST00000610470 PHACTR3Q96KR7 559 aa23.2■■□□□ 1.3
PRKN-208ENST00000610470 SRP68Q9UHB9 627 aaKnown RBP23.2■■□□□ 1.3
PRKN-208ENST00000610470 C10orf71Q711Q0 1435 aa23.19■■□□□ 1.3
PRKN-208ENST00000610470 SOS1Q07889 1333 aaPredicted RBP23.19■■□□□ 1.3
PRKN-208ENST00000610470 FCHSD2O94868 740 aa23.19■■□□□ 1.3
PRKN-208ENST00000610470 ZPR1O75312 459 aa23.18■■□□□ 1.3
PRKN-208ENST00000610470 KIF13BQ9NQT8 1826 aa23.17■■□□□ 1.3
PRKN-208ENST00000610470 UBR2Q8IWV8 1755 aa23.17■■□□□ 1.3
PRKN-208ENST00000610470 FKBP8Q14318 412 aa23.17■■□□□ 1.3
PRKN-208ENST00000610470 ZNF790Q6PG37 636 aa23.17■■□□□ 1.3
PRKN-208ENST00000610470 WWC3Q9ULE0 1092 aa23.17■■□□□ 1.3
PRKN-208ENST00000610470 PXDNLA1KZ92 1463 aa23.17■■□□□ 1.3
PRKN-208ENST00000610470 CEMIPQ8WUJ3 1361 aa23.16■■□□□ 1.3
PRKN-208ENST00000610470 STARD3NLO95772 234 aa23.16■■□□□ 1.3
PRKN-208ENST00000610470 ZBTB1Q9Y2K1 713 aa23.16■■□□□ 1.3
PRKN-208ENST00000610470 TEX13AQ9BXU3 409 aaPredicted RBP23.15■■□□□ 1.3
PRKN-208ENST00000610470 COL15A1P39059 1388 aa23.14■■□□□ 1.3
PRKN-208ENST00000610470 USPL1Q5W0Q7 1092 aa23.14■■□□□ 1.29
PRKN-208ENST00000610470 RTF1Q92541 710 aaKnown RBP23.14■■□□□ 1.29
PRKN-208ENST00000610470 ZNF496Q96IT1 587 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms