RNA–Protein interactions for RNA: ENST00000609795.5

HNF4A-208, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,192 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-208ENST00000609795 TEFQ10587 303 aa23.6■■□□□ 1.37
HNF4A-208ENST00000609795 MRC1P22897 1456 aa23.58■■□□□ 1.37
HNF4A-208ENST00000609795 EN1Q05925 392 aaPredicted RBP23.58■■□□□ 1.37
HNF4A-208ENST00000609795 DEFB132Q7Z7B7 95 aa23.58■■□□□ 1.37
HNF4A-208ENST00000609795 TRIM35Q9UPQ4 493 aa23.57■■□□□ 1.36
HNF4A-208ENST00000609795 SIPA1L3O60292 1781 aaPredicted RBP23.57■■□□□ 1.36
HNF4A-208ENST00000609795 SMARCC1Q92922 1105 aaPredicted RBP23.56■■□□□ 1.36
HNF4A-208ENST00000609795 CAMKK2Q96RR4 588 aa23.55■■□□□ 1.36
HNF4A-208ENST00000609795 ATG3Q9NT62 314 aa23.55■■□□□ 1.36
HNF4A-208ENST00000609795 ASAP1Q9ULH1 1129 aa23.55■■□□□ 1.36
HNF4A-208ENST00000609795 RGPD3A6NKT7 1758 aaPredicted RBP23.55■■□□□ 1.36
HNF4A-208ENST00000609795 RGPD4Q7Z3J3 1758 aa23.55■■□□□ 1.36
HNF4A-208ENST00000609795 SENP3-EIF4A1A0A087X0R7 540 aa23.54■■□□□ 1.36
HNF4A-208ENST00000609795 EZH2Q15910 746 aaKnown RBP23.54■■□□□ 1.36
HNF4A-208ENST00000609795 THUMPD2Q9BTF0 503 aaKnown RBP23.54■■□□□ 1.36
HNF4A-208ENST00000609795 TAF7Q15545 349 aaPredicted RBP23.53■■□□□ 1.36
HNF4A-208ENST00000609795 NCBP3Q53F19 620 aaKnown RBP23.53■■□□□ 1.36
HNF4A-208ENST00000609795 LY75O60449 1722 aa23.53■■□□□ 1.36
HNF4A-208ENST00000609795 PALLDQ8WX93 1383 aa23.52■■□□□ 1.36
HNF4A-208ENST00000609795 BTBD11A6QL63 1104 aa23.51■■□□□ 1.35
HNF4A-208ENST00000609795 CCDC27Q2M243 656 aa23.51■■□□□ 1.35
HNF4A-208ENST00000609795 TXNRD1Q16881 649 aa23.5■■□□□ 1.35
HNF4A-208ENST00000609795 PROM2Q8N271 834 aa23.5■■□□□ 1.35
HNF4A-208ENST00000609795 PAPPAQ13219 1627 aa23.49■■□□□ 1.35
HNF4A-208ENST00000609795 SLC39A6Q13433 755 aa23.49■■□□□ 1.35
HNF4A-208ENST00000609795 NGEFQ8N5V2 710 aa23.49■■□□□ 1.35
HNF4A-208ENST00000609795 SALL2Q9Y467 1007 aaPredicted RBP23.49■■□□□ 1.35
HNF4A-208ENST00000609795 SLC27A3Q5K4L6 730 aa23.47■■□□□ 1.35
HNF4A-208ENST00000609795 ZNF790Q6PG37 636 aa23.47■■□□□ 1.35
HNF4A-208ENST00000609795 WWC1Q8IX03 1113 aa23.47■■□□□ 1.35
HNF4A-208ENST00000609795 TTC5Q8N0Z6 440 aa23.47■■□□□ 1.35
HNF4A-208ENST00000609795 RREB1Q92766 1687 aa23.47■■□□□ 1.35
HNF4A-208ENST00000609795 LOC102724428A0A0B4J2F2 783 aa23.46■■□□□ 1.35
HNF4A-208ENST00000609795 SIK1P57059 783 aa23.46■■□□□ 1.35
HNF4A-208ENST00000609795 CALD1Q05682 793 aaKnown RBP23.46■■□□□ 1.35
HNF4A-208ENST00000609795 RBM42Q9BTD8 480 aaKnown RBP23.46■■□□□ 1.35
HNF4A-208ENST00000609795 MIS18AQ9NYP9 233 aa23.46■■□□□ 1.35
HNF4A-208ENST00000609795 CCNL1Q9UK58 526 aaPredicted RBP23.46■■□□□ 1.35
HNF4A-208ENST00000609795 PTCD1O75127 700 aaKnown RBP23.45■■□□□ 1.34
HNF4A-208ENST00000609795 BABAM1Q9NWV8 329 aa23.45■■□□□ 1.34
HNF4A-208ENST00000609795 UBR2Q8IWV8 1755 aa23.45■■□□□ 1.34
HNF4A-208ENST00000609795 LRRC4BQ9NT99 713 aa23.44■■□□□ 1.34
HNF4A-208ENST00000609795 KCNQ3O43525 872 aa23.43■■□□□ 1.34
HNF4A-208ENST00000609795 KCNQ4P56696 695 aa23.43■■□□□ 1.34
HNF4A-208ENST00000609795 LAS1LQ9Y4W2 734 aaKnown RBP23.43■■□□□ 1.34
HNF4A-208ENST00000609795 KDM3BQ7LBC6 1761 aa23.42■■□□□ 1.34
HNF4A-208ENST00000609795 NUP188Q5SRE5 1749 aa23.42■■□□□ 1.34
HNF4A-208ENST00000609795 ZNF831Q5JPB2 1677 aa23.42■■□□□ 1.34
HNF4A-208ENST00000609795 ATP6V1AP38606 617 aa23.42■■□□□ 1.34
HNF4A-208ENST00000609795 TSPYL4Q9UJ04 414 aa23.42■■□□□ 1.34
HNF4A-208ENST00000609795 KCPQ6ZWJ8 1503 aa23.42■■□□□ 1.34
HNF4A-208ENST00000609795 CHL1O00533 1208 aa23.41■■□□□ 1.34
HNF4A-208ENST00000609795 HMGB2P26583 209 aaKnown RBP23.41■■□□□ 1.34
HNF4A-208ENST00000609795 WDR63Q8IWG1 891 aa23.41■■□□□ 1.34
HNF4A-208ENST00000609795 CFAP44Q96MT7 982 aa23.41■■□□□ 1.34
HNF4A-208ENST00000609795 SLC4A9Q96Q91 983 aa23.41■■□□□ 1.34
HNF4A-208ENST00000609795 ZNF496Q96IT1 587 aaPredicted RBP23.4■■□□□ 1.34
HNF4A-208ENST00000609795 FMNL2Q96PY5 1086 aa23.4■■□□□ 1.34
HNF4A-208ENST00000609795 TAF1LQ8IZX4 1826 aa23.4■■□□□ 1.34
HNF4A-208ENST00000609795 GNAI1P63096 354 aa23.39■■□□□ 1.33
HNF4A-208ENST00000609795 VSIG10Q8N0Z9 540 aa23.39■■□□□ 1.33
HNF4A-208ENST00000609795 IFT57Q9NWB7 429 aa23.39■■□□□ 1.33
HNF4A-208ENST00000609795 C5P01031 1676 aa23.38■■□□□ 1.33
HNF4A-208ENST00000609795 ZNF853P0CG23 659 aa23.38■■□□□ 1.33
HNF4A-208ENST00000609795 ITPK1Q13572 414 aa23.38■■□□□ 1.33
HNF4A-208ENST00000609795 HEG1Q9ULI3 1381 aa23.38■■□□□ 1.33
HNF4A-208ENST00000609795 IL16Q14005 1332 aa23.37■■□□□ 1.33
HNF4A-208ENST00000609795 NBPF14Q5TI25 921 aa23.37■■□□□ 1.33
HNF4A-208ENST00000609795 EIF4A1P60842 406 aaKnown RBP23.36■■□□□ 1.33
HNF4A-208ENST00000609795 TJP1Q07157 1748 aa23.36■■□□□ 1.33
HNF4A-208ENST00000609795 ZNF521Q96K83 1311 aa23.35■■□□□ 1.33
HNF4A-208ENST00000609795 CICQ96RK0 1608 aaPredicted RBP23.35■■□□□ 1.33
HNF4A-208ENST00000609795 LINC00116Q8NCU8 138 aa23.35■■□□□ 1.33
HNF4A-208ENST00000609795 MBIPQ9NS73 344 aa23.35■■□□□ 1.33
HNF4A-208ENST00000609795 HNRNPUQ00839 825 aaKnown RBP eCLIP23.34■■□□□ 1.33
HNF4A-208ENST00000609795 DNAJC10Q8IXB1 793 aa23.34■■□□□ 1.33
HNF4A-208ENST00000609795 TEX13AQ9BXU3 409 aaPredicted RBP23.34■■□□□ 1.33
HNF4A-208ENST00000609795 COL5A3P25940 1745 aaPredicted RBP23.33■■□□□ 1.33
HNF4A-208ENST00000609795 SNRPA1P09661 255 aaKnown RBP23.33■■□□□ 1.33
HNF4A-208ENST00000609795 AKT1S1Q96B36 256 aa23.32■■□□□ 1.32
HNF4A-208ENST00000609795 STK32BQ9NY57 414 aa23.32■■□□□ 1.32
HNF4A-208ENST00000609795 C4BP0C0L5 1744 aa23.32■■□□□ 1.32
HNF4A-208ENST00000609795 SLC15A2Q16348 729 aa23.31■■□□□ 1.32
HNF4A-208ENST00000609795 ANO8Q9HCE9 1232 aaPredicted RBP23.31■■□□□ 1.32
HNF4A-208ENST00000609795 GIGYF1O75420 1035 aaPredicted RBP23.3■■□□□ 1.32
HNF4A-208ENST00000609795 STARD3NLO95772 234 aa23.3■■□□□ 1.32
HNF4A-208ENST00000609795 CYP19A1P11511 503 aaPredicted RBP23.3■■□□□ 1.32
HNF4A-208ENST00000609795 RC3H1Q5TC82 1133 aaKnown RBP23.3■■□□□ 1.32
HNF4A-208ENST00000609795 PRAMEF22A3QJZ6 481 aa23.29■■□□□ 1.32
HNF4A-208ENST00000609795 GOLGA2Q08379 1002 aa23.29■■□□□ 1.32
HNF4A-208ENST00000609795 ZNF827Q17R98 1081 aa23.29■■□□□ 1.32
HNF4A-208ENST00000609795 TSR2Q969E8 191 aaKnown RBP23.29■■□□□ 1.32
HNF4A-208ENST00000609795 SPINK5Q9NQ38 1064 aaPredicted RBP23.29■■□□□ 1.32
HNF4A-208ENST00000609795 USP16Q9Y5T5 823 aa23.29■■□□□ 1.32
HNF4A-208ENST00000609795 AK7Q96M32 723 aa23.28■■□□□ 1.32
HNF4A-208ENST00000609795 CNTNAP4Q9C0A0 1308 aa23.28■■□□□ 1.32
HNF4A-208ENST00000609795 CRKLP46109 303 aaKnown RBP23.27■■□□□ 1.32
HNF4A-208ENST00000609795 MYH16Q9H6N6 1097 aa23.27■■□□□ 1.32
HNF4A-208ENST00000609795 TFCP2L1Q9NZI6 479 aa23.27■■□□□ 1.32
HNF4A-208ENST00000609795 MYH14Q7Z406 1995 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms