RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 SMARCA5O60264 1052 aaPredicted RBP15.1■□□□□ 0.01
CTCFL-218ENST00000608440 CFAP70Q5T0N1 1121 aa15.1■□□□□ 0.01
CTCFL-218ENST00000608440 NCAPGQ9BPX3 1015 aa15.1■□□□□ 0.01
CTCFL-218ENST00000608440 IFT172Q9UG01 1749 aa15.1■□□□□ 0.01
CTCFL-218ENST00000608440 LAMC1P11047 1609 aa15.1■□□□□ 0.01
CTCFL-218ENST00000608440 PHF14O94880 888 aa15.1■□□□□ 0.01
CTCFL-218ENST00000608440 PTGS1P23219 599 aa15.1■□□□□ 0.01
CTCFL-218ENST00000608440 ANKRD45Q5TZF3 282 aa15.1■□□□□ 0.01
CTCFL-218ENST00000608440 KRBA2Q6ZNG9 492 aa15.1■□□□□ 0.01
CTCFL-218ENST00000608440 POLKQ9UBT6 870 aa15.1■□□□□ 0.01
CTCFL-218ENST00000608440 MYO1CO00159 1063 aa15.09■□□□□ 0.01
CTCFL-218ENST00000608440 SENP3Q9H4L4 574 aaPredicted RBP15.09■□□□□ 0.01
CTCFL-218ENST00000608440 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.09■□□□□ 0.01
CTCFL-218ENST00000608440 DRC1Q96MC2 740 aa15.09■□□□□ 0.01
CTCFL-218ENST00000608440 POLR3GO15318 223 aaPredicted RBP15.08■□□□□ 0
CTCFL-218ENST00000608440 CASQ1P31415 396 aa15.08■□□□□ 0
CTCFL-218ENST00000608440 ELF2Q15723 593 aa15.08■□□□□ 0
CTCFL-218ENST00000608440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.08■□□□□ 0
CTCFL-218ENST00000608440 GOLGA6L6A8MZA4 724 aa15.08■□□□□ 0
CTCFL-218ENST00000608440 BRPF1P55201 1214 aaPredicted RBP15.08■□□□□ 0
CTCFL-218ENST00000608440 LRMPQ12912 555 aa15.08■□□□□ 0
CTCFL-218ENST00000608440 SART3Q15020 963 aaKnown RBP15.08■□□□□ 0
CTCFL-218ENST00000608440 FAM53CQ9NYF3 392 aa15.08■□□□□ 0
CTCFL-218ENST00000608440 ZNF215Q9UL58 517 aaPredicted RBP15.08■□□□□ 0
CTCFL-218ENST00000608440 NRXN1Q9ULB1 1477 aa15.07■□□□□ 0
CTCFL-218ENST00000608440 PPLO60437 1756 aa15.07■□□□□ 0
CTCFL-218ENST00000608440 REC8O95072 547 aa15.07■□□□□ 0
CTCFL-218ENST00000608440 KIF1BPQ96EK5 621 aa15.06■□□□□ 0
CTCFL-218ENST00000608440 ANKRD36BQ8N2N9 1353 aa15.06■□□□□ 0
CTCFL-218ENST00000608440 NEXMIFQ5QGS0 1516 aa15.06■□□□□ 0
CTCFL-218ENST00000608440 SLC26A8Q96RN1 970 aa15.06■□□□□ 0
CTCFL-218ENST00000608440 STAG3Q9UJ98 1225 aa15.06■□□□□ 0
CTCFL-218ENST00000608440 PIK3C2GO75747 1445 aa15.05■□□□□ 0
CTCFL-218ENST00000608440 SPATA31D1Q6ZQQ2 1576 aa15.05■□□□□ 0
CTCFL-218ENST00000608440 TRIM27P14373 513 aa15.05■□□□□ 0
CTCFL-218ENST00000608440 CCDC191Q8NCU4 936 aa15.05■□□□□ 0
CTCFL-218ENST00000608440 RPGRIP1LQ68CZ1 1315 aa15.05■□□□□ 0
CTCFL-218ENST00000608440 GUCY2CP25092 1073 aa15.05■□□□□ -0
CTCFL-218ENST00000608440 TPD52L1Q16890 204 aaPredicted RBP15.05■□□□□ -0
CTCFL-218ENST00000608440 TMED8Q6PL24 325 aaPredicted RBP15.05■□□□□ -0
CTCFL-218ENST00000608440 DDX19BQ9UMR2 479 aa15.05■□□□□ -0
CTCFL-218ENST00000608440 SCAF11Q99590 1463 aaKnown RBP15.05■□□□□ -0
CTCFL-218ENST00000608440 TMEM131LA2VDJ0 1609 aa15.04■□□□□ -0
CTCFL-218ENST00000608440 ST18O60284 1047 aa15.04■□□□□ -0
CTCFL-218ENST00000608440 USP48Q86UV5 1035 aa15.04■□□□□ -0
CTCFL-218ENST00000608440 CREBRFQ8IUR6 639 aa15.04■□□□□ -0
CTCFL-218ENST00000608440 CEP83Q9Y592 693 aa15.04■□□□□ -0
CTCFL-218ENST00000608440 PAXBP1Q9Y5B6 917 aa15.04■□□□□ -0
CTCFL-218ENST00000608440 CTR9Q6PD62 1173 aa15.04■□□□□ -0
CTCFL-218ENST00000608440 CARD10Q9BWT7 1032 aa15.04■□□□□ -0
CTCFL-218ENST00000608440 IQGAP1P46940 1657 aa15.04■□□□□ -0
CTCFL-218ENST00000608440 MYO5BQ9ULV0 1848 aa15.04■□□□□ -0
CTCFL-218ENST00000608440 PLPPR3Q6T4P5 718 aa15.03■□□□□ -0
CTCFL-218ENST00000608440 LRRFIP2Q9Y608 721 aaKnown RBP15.03■□□□□ -0
CTCFL-218ENST00000608440 CDC45O75419 566 aa15.03■□□□□ -0
CTCFL-218ENST00000608440 TPM3P06753 285 aa15.03■□□□□ -0
CTCFL-218ENST00000608440 NOL8Q76FK4 1167 aaKnown RBP15.03■□□□□ -0
CTCFL-218ENST00000608440 CCDC186Q7Z3E2 898 aa15.03■□□□□ -0
CTCFL-218ENST00000608440 JRKLQ9Y4A0 524 aa15.03■□□□□ -0
CTCFL-218ENST00000608440 KIAA1210Q9ULL0 1709 aa15.03■□□□□ -0
CTCFL-218ENST00000608440 CCDC172P0C7W6 258 aa15.02■□□□□ -0
CTCFL-218ENST00000608440 ST5P78524 1137 aa15.02■□□□□ -0
CTCFL-218ENST00000608440 TMEM57Q8N5G2 664 aa15.02■□□□□ -0
CTCFL-218ENST00000608440 USP26Q9BXU7 913 aa15.02■□□□□ -0
CTCFL-218ENST00000608440 CEP135Q66GS9 1140 aa15.02□□□□□ -0.01
CTCFL-218ENST00000608440 GIMAP6Q6P9H5 292 aa15.02□□□□□ -0.01
CTCFL-218ENST00000608440 DRC7Q8IY82 874 aa15.02□□□□□ -0.01
CTCFL-218ENST00000608440 BMS1Q14692 1282 aaKnown RBP15.01□□□□□ -0.01
CTCFL-218ENST00000608440 E2F4Q16254 413 aa15.01□□□□□ -0.01
CTCFL-218ENST00000608440 CCDC183Q5T5S1 534 aa15.01□□□□□ -0.01
CTCFL-218ENST00000608440 TCP11L2Q8N4U5 519 aa15.01□□□□□ -0.01
CTCFL-218ENST00000608440 NRBP1Q9UHY1 535 aa15.01□□□□□ -0.01
CTCFL-218ENST00000608440 ZSCAN26Q16670 478 aa15.01□□□□□ -0.01
CTCFL-218ENST00000608440 TEX35Q5T0J7 233 aa15.01□□□□□ -0.01
CTCFL-218ENST00000608440 TMEM132EQ6IEE7 984 aa15.01□□□□□ -0.01
CTCFL-218ENST00000608440 CEBPAP49715 358 aaPredicted RBP15□□□□□ -0.01
CTCFL-218ENST00000608440 TXLNBQ8N3L3 684 aa15□□□□□ -0.01
CTCFL-218ENST00000608440 SMARCE1Q969G3 411 aa15□□□□□ -0.01
CTCFL-218ENST00000608440 BRD1O95696 1058 aa15□□□□□ -0.01
CTCFL-218ENST00000608440 MUM1L1Q5H9M0 696 aa15□□□□□ -0.01
CTCFL-218ENST00000608440 TSR2Q969E8 191 aaKnown RBP15□□□□□ -0.01
CTCFL-218ENST00000608440 C14orf93Q9H972 538 aaKnown RBP15□□□□□ -0.01
CTCFL-218ENST00000608440 ZBTB40Q9NUA8 1239 aa15□□□□□ -0.01
CTCFL-218ENST00000608440 EXOC6BQ9Y2D4 811 aa15□□□□□ -0.01
CTCFL-218ENST00000608440 TNRQ92752 1358 aa14.99□□□□□ -0.01
CTCFL-218ENST00000608440 DNAJC21Q5F1R6 531 aaKnown RBP14.99□□□□□ -0.01
CTCFL-218ENST00000608440 C1orf115Q9H7X2 142 aa14.99□□□□□ -0.01
CTCFL-218ENST00000608440 BRMS1Q9HCU9 246 aa14.99□□□□□ -0.01
CTCFL-218ENST00000608440 NOB1Q9ULX3 412 aaKnown RBP14.99□□□□□ -0.01
CTCFL-218ENST00000608440 FHOD1Q9Y613 1164 aa14.99□□□□□ -0.01
CTCFL-218ENST00000608440 A2ML1A8K2U0 1454 aa14.98□□□□□ -0.01
CTCFL-218ENST00000608440 PLA2G4AP47712 749 aa14.98□□□□□ -0.01
CTCFL-218ENST00000608440 GOLGA6L1Q8N7Z2 621 aa14.98□□□□□ -0.01
CTCFL-218ENST00000608440 ZCCHC17Q9NP64 241 aaKnown RBP14.98□□□□□ -0.01
CTCFL-218ENST00000608440 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.98□□□□□ -0.01
CTCFL-218ENST00000608440 ADGRB1O14514 1584 aa14.97□□□□□ -0.01
CTCFL-218ENST00000608440 MX1P20591 662 aa14.97□□□□□ -0.01
CTCFL-218ENST00000608440 ATF7IPQ6VMQ6 1270 aa14.97□□□□□ -0.01
CTCFL-218ENST00000608440 FAM212AQ96EL1 285 aa14.97□□□□□ -0.01
CTCFL-218ENST00000608440 ATG3Q9NT62 314 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms