RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 UBR3Q6ZT12 1888 aa19.22■□□□□ 0.67
PRDM16-210ENST00000607632 SGIP1Q9BQI5 828 aa19.22■□□□□ 0.67
PRDM16-210ENST00000607632 COL5A3P25940 1745 aaPredicted RBP19.22■□□□□ 0.67
PRDM16-210ENST00000607632 RNMTO43148 476 aaKnown RBP19.21■□□□□ 0.67
PRDM16-210ENST00000607632 PTGER2P43116 358 aa19.21■□□□□ 0.67
PRDM16-210ENST00000607632 CABP4P57796 275 aa19.21■□□□□ 0.67
PRDM16-210ENST00000607632 SLC16A10Q8TF71 515 aa19.21■□□□□ 0.67
PRDM16-210ENST00000607632 MTFR1LQ9H019 292 aa19.21■□□□□ 0.67
PRDM16-210ENST00000607632 SIPA1L3O60292 1781 aaPredicted RBP19.2■□□□□ 0.66
PRDM16-210ENST00000607632 FCHSD2O94868 740 aa19.2■□□□□ 0.66
PRDM16-210ENST00000607632 GAS2L2Q8NHY3 880 aa19.2■□□□□ 0.66
PRDM16-210ENST00000607632 LGR6Q9HBX8 967 aa19.2■□□□□ 0.66
PRDM16-210ENST00000607632 ZBTB7AO95365 584 aa19.19■□□□□ 0.66
PRDM16-210ENST00000607632 PRKAR2BP31323 418 aa19.19■□□□□ 0.66
PRDM16-210ENST00000607632 NFATC2IPQ8NCF5 419 aa19.19■□□□□ 0.66
PRDM16-210ENST00000607632 SLC4A9Q96Q91 983 aa19.19■□□□□ 0.66
PRDM16-210ENST00000607632 SLC52A2Q9HAB3 445 aa19.19■□□□□ 0.66
PRDM16-210ENST00000607632 TFCP2L1Q9NZI6 479 aa19.19■□□□□ 0.66
PRDM16-210ENST00000607632 MAP3K5Q99683 1374 aa19.19■□□□□ 0.66
PRDM16-210ENST00000607632 ITPK1Q13572 414 aa19.18■□□□□ 0.66
PRDM16-210ENST00000607632 PHACTR3Q96KR7 559 aa19.18■□□□□ 0.66
PRDM16-210ENST00000607632 TJP1Q07157 1748 aa19.17■□□□□ 0.66
PRDM16-210ENST00000607632 UBR2Q8IWV8 1755 aa19.17■□□□□ 0.66
PRDM16-210ENST00000607632 U2AF1L5P0DN76 240 aaPredicted RBP19.17■□□□□ 0.66
PRDM16-210ENST00000607632 U2AF1Q01081 240 aaKnown RBP eCLIP19.17■□□□□ 0.66
PRDM16-210ENST00000607632 LINC00116Q8NCU8 138 aa19.17■□□□□ 0.66
PRDM16-210ENST00000607632 CEMIPQ8WUJ3 1361 aa19.17■□□□□ 0.66
PRDM16-210ENST00000607632 KCPQ6ZWJ8 1503 aa19.15■□□□□ 0.66
PRDM16-210ENST00000607632 GNAT3A8MTJ3 354 aa19.15■□□□□ 0.66
PRDM16-210ENST00000607632 ATP6V1AP38606 617 aa19.15■□□□□ 0.66
PRDM16-210ENST00000607632 COL23A1Q86Y22 540 aaPredicted RBP19.15■□□□□ 0.66
PRDM16-210ENST00000607632 FLAD1Q8NFF5 587 aa19.15■□□□□ 0.66
PRDM16-210ENST00000607632 MYBBP1AQ9BQG0 1328 aaKnown RBP19.15■□□□□ 0.66
PRDM16-210ENST00000607632 AMIGO3Q86WK7 504 aa19.14■□□□□ 0.65
PRDM16-210ENST00000607632 IL17REQ8NFR9 667 aa19.14■□□□□ 0.65
PRDM16-210ENST00000607632 ATF5Q9Y2D1 282 aaPredicted RBP19.14■□□□□ 0.65
PRDM16-210ENST00000607632 CNTNAP4Q9C0A0 1308 aa19.13■□□□□ 0.65
PRDM16-210ENST00000607632 MYH14Q7Z406 1995 aaKnown RBP19.13■□□□□ 0.65
PRDM16-210ENST00000607632 SSFA2P28290 1259 aa19.12■□□□□ 0.65
PRDM16-210ENST00000607632 RC3H1Q5TC82 1133 aaKnown RBP19.12■□□□□ 0.65
PRDM16-210ENST00000607632 AK7Q96M32 723 aa19.12■□□□□ 0.65
PRDM16-210ENST00000607632 PLEKHF1Q96S99 279 aa19.12■□□□□ 0.65
PRDM16-210ENST00000607632 PRKRIP1Q9H875 184 aaPredicted RBP19.12■□□□□ 0.65
PRDM16-210ENST00000607632 DLG5Q8TDM6 1919 aa19.1■□□□□ 0.65
PRDM16-210ENST00000607632 RBM42Q9BTD8 480 aaKnown RBP19.1■□□□□ 0.65
PRDM16-210ENST00000607632 HTATSF1O43719 755 aaKnown RBP19.09■□□□□ 0.65
PRDM16-210ENST00000607632 PPP1R1BQ9UD71 204 aaPredicted RBP19.09■□□□□ 0.65
PRDM16-210ENST00000607632 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.08■□□□□ 0.64
PRDM16-210ENST00000607632 PTCD1O75127 700 aaKnown RBP19.08■□□□□ 0.64
PRDM16-210ENST00000607632 ZNF316A6NFI3 1004 aaPredicted RBP19.07■□□□□ 0.64
PRDM16-210ENST00000607632 SLC39A6Q13433 755 aa19.07■□□□□ 0.64
PRDM16-210ENST00000607632 VSIG10Q8N0Z9 540 aa19.07■□□□□ 0.64
PRDM16-210ENST00000607632 ARXQ96QS3 562 aa19.07■□□□□ 0.64
PRDM16-210ENST00000607632 C4AP0C0L4 1744 aa19.07■□□□□ 0.64
PRDM16-210ENST00000607632 GNPATO15228 680 aa19.06■□□□□ 0.64
PRDM16-210ENST00000607632 RPS6KA4O75676 772 aa19.06■□□□□ 0.64
PRDM16-210ENST00000607632 ADRA2BP18089 450 aa19.06■□□□□ 0.64
PRDM16-210ENST00000607632 TEFQ10587 303 aa19.06■□□□□ 0.64
PRDM16-210ENST00000607632 PNNQ9H307 717 aaKnown RBP19.05■□□□□ 0.64
PRDM16-210ENST00000607632 POLD1P28340 1107 aa19.04■□□□□ 0.64
PRDM16-210ENST00000607632 ZNF790Q6PG37 636 aa19.04■□□□□ 0.64
PRDM16-210ENST00000607632 SMIM5Q71RC9 77 aa19.04■□□□□ 0.64
PRDM16-210ENST00000607632 RTCBQ9Y3I0 505 aaKnown RBP19.04■□□□□ 0.64
PRDM16-210ENST00000607632 CRKLP46109 303 aaKnown RBP19.03■□□□□ 0.64
PRDM16-210ENST00000607632 DNAJC10Q8IXB1 793 aa19.03■□□□□ 0.64
PRDM16-210ENST00000607632 FHDC1Q9C0D6 1143 aaPredicted RBP19.03■□□□□ 0.64
PRDM16-210ENST00000607632 MSH5O43196 834 aa19.02■□□□□ 0.64
PRDM16-210ENST00000607632 PHF14O94880 888 aa19.02■□□□□ 0.64
PRDM16-210ENST00000607632 CYP19A1P11511 503 aaPredicted RBP19.02■□□□□ 0.64
PRDM16-210ENST00000607632 NFE2L2Q16236 605 aa19.02■□□□□ 0.64
PRDM16-210ENST00000607632 INTS5Q6P9B9 1019 aaKnown RBP19.02■□□□□ 0.64
PRDM16-210ENST00000607632 RTF1Q92541 710 aaKnown RBP19.02■□□□□ 0.64
PRDM16-210ENST00000607632 SYT17Q9BSW7 474 aa19.02■□□□□ 0.64
PRDM16-210ENST00000607632 HEG1Q9ULI3 1381 aa19.02■□□□□ 0.64
PRDM16-210ENST00000607632 NEFMP07197 916 aa19.01■□□□□ 0.63
PRDM16-210ENST00000607632 MCM10Q7L590 875 aa19.01■□□□□ 0.63
PRDM16-210ENST00000607632 ZNF496Q96IT1 587 aaPredicted RBP19.01■□□□□ 0.63
PRDM16-210ENST00000607632 KDM3BQ7LBC6 1761 aa19.01■□□□□ 0.63
PRDM16-210ENST00000607632 TRAPPC3LQ5T215 181 aa19■□□□□ 0.63
PRDM16-210ENST00000607632 TTC5Q8N0Z6 440 aa19■□□□□ 0.63
PRDM16-210ENST00000607632 ARHGEF1Q92888 912 aaKnown RBP19■□□□□ 0.63
PRDM16-210ENST00000607632 BTBD11A6QL63 1104 aa18.99■□□□□ 0.63
PRDM16-210ENST00000607632 DCTN1Q14203 1278 aa18.99■□□□□ 0.63
PRDM16-210ENST00000607632 MSL1Q68DK7 614 aa18.99■□□□□ 0.63
PRDM16-210ENST00000607632 CCDC87Q9NVE4 849 aa18.99■□□□□ 0.63
PRDM16-210ENST00000607632 SOS1Q07889 1333 aaPredicted RBP18.99■□□□□ 0.63
PRDM16-210ENST00000607632 MAPK8IP3Q9UPT6 1336 aa18.99■□□□□ 0.63
PRDM16-210ENST00000607632 FMNL2Q96PY5 1086 aa18.97■□□□□ 0.63
PRDM16-210ENST00000607632 TEX13AQ9BXU3 409 aaPredicted RBP18.97■□□□□ 0.63
PRDM16-210ENST00000607632 KCNQ3O43525 872 aa18.96■□□□□ 0.63
PRDM16-210ENST00000607632 GYS1P13807 737 aa18.96■□□□□ 0.63
PRDM16-210ENST00000607632 TAF7Q15545 349 aaPredicted RBP18.96■□□□□ 0.63
PRDM16-210ENST00000607632 USP42Q9H9J4 1324 aaKnown RBP18.96■□□□□ 0.63
PRDM16-210ENST00000607632 KIF13BQ9NQT8 1826 aa18.95■□□□□ 0.62
PRDM16-210ENST00000607632 NLGN1Q8N2Q7 840 aa18.95■□□□□ 0.62
PRDM16-210ENST00000607632 ZBTB1Q9Y2K1 713 aa18.95■□□□□ 0.62
PRDM16-210ENST00000607632 STARD3NLO95772 234 aa18.94■□□□□ 0.62
PRDM16-210ENST00000607632 RFC4P35249 363 aa18.94■□□□□ 0.62
PRDM16-210ENST00000607632 TMPOP42166 694 aaKnown RBP18.94■□□□□ 0.62
PRDM16-210ENST00000607632 ADAMTS8Q9UP79 889 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms