RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 MAP3K10Q02779 954 aa11.38□□□□□ -0.59
LINC00458-206ENST00000607494 WDR44Q5JSH3 913 aa11.38□□□□□ -0.59
LINC00458-206ENST00000607494 FOXR1Q6PIV2 292 aa11.38□□□□□ -0.59
LINC00458-206ENST00000607494 MARSP56192 900 aaKnown RBP11.37□□□□□ -0.59
LINC00458-206ENST00000607494 TMEM214Q6NUQ4 689 aaKnown RBP11.37□□□□□ -0.59
LINC00458-206ENST00000607494 ACDQ96AP0 544 aa11.37□□□□□ -0.59
LINC00458-206ENST00000607494 TRERF1Q96PN7 1200 aa11.37□□□□□ -0.59
LINC00458-206ENST00000607494 RUBCNLQ9H714 662 aa11.36□□□□□ -0.59
LINC00458-206ENST00000607494 CHIC2Q9UKJ5 165 aa11.36□□□□□ -0.59
LINC00458-206ENST00000607494 MX2P20592 715 aa11.35□□□□□ -0.59
LINC00458-206ENST00000607494 USP4Q13107 963 aa11.35□□□□□ -0.59
LINC00458-206ENST00000607494 TLR1Q15399 786 aa11.35□□□□□ -0.59
LINC00458-206ENST00000607494 PIK3CDO00329 1044 aa11.34□□□□□ -0.59
LINC00458-206ENST00000607494 SCNN1DP51172 638 aa11.34□□□□□ -0.59
LINC00458-206ENST00000607494 ESCO1Q5FWF5 840 aa11.34□□□□□ -0.59
LINC00458-206ENST00000607494 GNASQ5JWF2 1037 aa11.34□□□□□ -0.59
LINC00458-206ENST00000607494 A0A1B0GTH6 734 aa11.33□□□□□ -0.6
LINC00458-206ENST00000607494 PLPP7Q8NBV4 271 aa11.33□□□□□ -0.6
LINC00458-206ENST00000607494 UBAP2LQ14157 1087 aaKnown RBP11.32□□□□□ -0.6
LINC00458-206ENST00000607494 BCRP11274 1271 aa11.31□□□□□ -0.6
LINC00458-206ENST00000607494 MSX1P28360 303 aa11.31□□□□□ -0.6
LINC00458-206ENST00000607494 GDF10P55107 478 aa11.31□□□□□ -0.6
LINC00458-206ENST00000607494 COG6Q9Y2V7 657 aa11.31□□□□□ -0.6
LINC00458-206ENST00000607494 GTF2E1P29083 439 aaPredicted RBP11.3□□□□□ -0.6
LINC00458-206ENST00000607494 PLA2G4AP47712 749 aa11.3□□□□□ -0.6
LINC00458-206ENST00000607494 RHBDD1Q8TEB9 315 aa11.3□□□□□ -0.6
LINC00458-206ENST00000607494 CNTNAP5Q8WYK1 1306 aa11.3□□□□□ -0.6
LINC00458-206ENST00000607494 SEMA3FQ13275 785 aa11.29□□□□□ -0.6
LINC00458-206ENST00000607494 WASHC4Q2M389 1173 aa11.29□□□□□ -0.6
LINC00458-206ENST00000607494 PPARGC1BQ86YN6 1023 aaKnown RBP11.29□□□□□ -0.6
LINC00458-206ENST00000607494 SCARF2Q96GP6 870 aaPredicted RBP11.29□□□□□ -0.6
LINC00458-206ENST00000607494 POM121Q96HA1 1249 aa11.29□□□□□ -0.6
LINC00458-206ENST00000607494 INHAP05111 366 aa11.28□□□□□ -0.6
LINC00458-206ENST00000607494 NEDD1Q8NHV4 660 aa11.28□□□□□ -0.6
LINC00458-206ENST00000607494 SERTAD1Q9UHV2 236 aa11.28□□□□□ -0.6
LINC00458-206ENST00000607494 ABHD17AQ96GS6 310 aa11.27□□□□□ -0.61
LINC00458-206ENST00000607494 ENAMQ9NRM1 1142 aa11.27□□□□□ -0.61
LINC00458-206ENST00000607494 USP3Q9Y6I4 520 aa11.27□□□□□ -0.61
LINC00458-206ENST00000607494 GPAT2Q6NUI2 795 aa11.26□□□□□ -0.61
LINC00458-206ENST00000607494 SIRT1Q96EB6 747 aa11.26□□□□□ -0.61
LINC00458-206ENST00000607494 OXCT2Q9BYC2 517 aaPredicted RBP11.26□□□□□ -0.61
LINC00458-206ENST00000607494 DNMT3AQ9Y6K1 912 aaPredicted RBP11.26□□□□□ -0.61
LINC00458-206ENST00000607494 TMEM229AB2RXF0 380 aa11.25□□□□□ -0.61
LINC00458-206ENST00000607494 CSB-PGBD3P0DP91 1061 aa11.25□□□□□ -0.61
LINC00458-206ENST00000607494 C1orf229Q6ZS94 237 aaPredicted RBP11.25□□□□□ -0.61
LINC00458-206ENST00000607494 PGBD3Q8N328 593 aa11.25□□□□□ -0.61
LINC00458-206ENST00000607494 CFHR5Q9BXR6 569 aa11.25□□□□□ -0.61
LINC00458-206ENST00000607494 LOC100996750A0A140TA64 210 aa11.24□□□□□ -0.61
LINC00458-206ENST00000607494 OIP5O43482 229 aa11.24□□□□□ -0.61
LINC00458-206ENST00000607494 ATP4AP20648 1035 aa11.24□□□□□ -0.61
LINC00458-206ENST00000607494 MAP7D1Q3KQU3 841 aa11.24□□□□□ -0.61
LINC00458-206ENST00000607494 KANK3Q6NY19 840 aa11.24□□□□□ -0.61
LINC00458-206ENST00000607494 KLRG1Q96E93 195 aa11.24□□□□□ -0.61
LINC00458-206ENST00000607494 KRTAP4-6Q9BYQ5 205 aa11.24□□□□□ -0.61
LINC00458-206ENST00000607494 NSFL1CQ9UNZ2 370 aaKnown RBP11.24□□□□□ -0.61
LINC00458-206ENST00000607494 SHISA8B8ZZ34 492 aa11.23□□□□□ -0.61
LINC00458-206ENST00000607494 C2CD2LO14523 706 aa11.23□□□□□ -0.61
LINC00458-206ENST00000607494 BNIP3LO60238 219 aa11.23□□□□□ -0.61
LINC00458-206ENST00000607494 SOX11P35716 441 aa11.22□□□□□ -0.61
LINC00458-206ENST00000607494 MAP2K3P46734 347 aa11.22□□□□□ -0.61
LINC00458-206ENST00000607494 SMTNP53814 917 aa11.22□□□□□ -0.61
LINC00458-206ENST00000607494 SUZ12Q15022 739 aaKnown RBP11.22□□□□□ -0.61
LINC00458-206ENST00000607494 EFHC2Q5JST6 749 aa11.22□□□□□ -0.61
LINC00458-206ENST00000607494 TBC1D9Q6ZT07 1266 aa11.22□□□□□ -0.61
LINC00458-206ENST00000607494 CRISPLD1Q9H336 500 aa11.22□□□□□ -0.61
LINC00458-206ENST00000607494 NDFIP2Q9NV92 336 aa11.22□□□□□ -0.61
LINC00458-206ENST00000607494 SKIP12755 728 aa11.21□□□□□ -0.61
LINC00458-206ENST00000607494 SNRPNP63162 240 aaKnown RBP11.21□□□□□ -0.61
LINC00458-206ENST00000607494 CTBSQ01459 385 aa11.21□□□□□ -0.61
LINC00458-206ENST00000607494 ZNF295-AS1Q8N0V1 137 aa11.21□□□□□ -0.61
LINC00458-206ENST00000607494 AIDAQ96BJ3 306 aa11.21□□□□□ -0.61
LINC00458-206ENST00000607494 DNAAF2Q9NVR5 837 aaKnown RBP11.21□□□□□ -0.61
LINC00458-206ENST00000607494 PHF24Q9UPV7 400 aa11.21□□□□□ -0.61
LINC00458-206ENST00000607494 PCDHGA11Q9Y5H2 935 aa11.21□□□□□ -0.61
LINC00458-206ENST00000607494 LBRQ14739 615 aaKnown RBP11.2□□□□□ -0.62
LINC00458-206ENST00000607494 ALG2Q9H553 416 aa11.2□□□□□ -0.62
LINC00458-206ENST00000607494 HCN2Q9UL51 889 aa11.2□□□□□ -0.62
LINC00458-206ENST00000607494 ATXN7L1Q9ULK2 861 aaPredicted RBP11.2□□□□□ -0.62
LINC00458-206ENST00000607494 POM121CA8CG34 1229 aa11.19□□□□□ -0.62
LINC00458-206ENST00000607494 FGFR3P22607 806 aa11.19□□□□□ -0.62
LINC00458-206ENST00000607494 DEPDC4Q8N2C3 294 aa11.19□□□□□ -0.62
LINC00458-206ENST00000607494 NIFKQ9BYG3 293 aaKnown RBP11.19□□□□□ -0.62
LINC00458-206ENST00000607494 IQSEC3Q9UPP2 1182 aaPredicted RBP11.19□□□□□ -0.62
LINC00458-206ENST00000607494 BMP4P12644 408 aa11.18□□□□□ -0.62
LINC00458-206ENST00000607494 GALNT6Q8NCL4 622 aa11.18□□□□□ -0.62
LINC00458-206ENST00000607494 DCAF5Q96JK2 942 aa11.18□□□□□ -0.62
LINC00458-206ENST00000607494 ZCCHC2Q9C0B9 1178 aaKnown RBP11.18□□□□□ -0.62
LINC00458-206ENST00000607494 PARP3Q9Y6F1 533 aa11.18□□□□□ -0.62
LINC00458-206ENST00000607494 A6NJY4 79 aa11.17□□□□□ -0.62
LINC00458-206ENST00000607494 PHF20L1A8MW92 1017 aa11.17□□□□□ -0.62
LINC00458-206ENST00000607494 ITGB2P05107 769 aa11.17□□□□□ -0.62
LINC00458-206ENST00000607494 NCOA4Q13772 614 aa11.17□□□□□ -0.62
LINC00458-206ENST00000607494 EML3Q32P44 896 aa11.17□□□□□ -0.62
LINC00458-206ENST00000607494 PODNQ7Z5L7 613 aa11.17□□□□□ -0.62
LINC00458-206ENST00000607494 DCDC2BA2VCK2 349 aa11.16□□□□□ -0.62
LINC00458-206ENST00000607494 GTF2IP78347 998 aa11.16□□□□□ -0.62
LINC00458-206ENST00000607494 MTFR1Q15390 333 aa11.16□□□□□ -0.62
LINC00458-206ENST00000607494 BEND7Q8N7W2 519 aaPredicted RBP11.16□□□□□ -0.62
LINC00458-206ENST00000607494 ADAMTS19Q8TE59 1207 aa11.16□□□□□ -0.62
LINC00458-206ENST00000607494 SLC4A9Q96Q91 983 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms