RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 TRAIPQ9BWF2 469 aa7.42□□□□□ -1.22
RNU6-88P-201ENST00000606801 HRH3Q9Y5N1 445 aa7.42□□□□□ -1.22
RNU6-88P-201ENST00000606801 CSB-PGBD3P0DP91 1061 aa7.41□□□□□ -1.22
RNU6-88P-201ENST00000606801 TRIM52Q96A61 297 aa7.41□□□□□ -1.22
RNU6-88P-201ENST00000606801 ZNF358Q9NW07 568 aa7.41□□□□□ -1.22
RNU6-88P-201ENST00000606801 USTQ9Y2C2 406 aa7.41□□□□□ -1.22
RNU6-88P-201ENST00000606801 WASLO00401 505 aaPredicted RBP7.4□□□□□ -1.22
RNU6-88P-201ENST00000606801 SPINT1O43278 529 aa7.4□□□□□ -1.22
RNU6-88P-201ENST00000606801 GNRH1P01148 92 aa7.4□□□□□ -1.22
RNU6-88P-201ENST00000606801 IL2RAP01589 272 aa7.4□□□□□ -1.22
RNU6-88P-201ENST00000606801 PTGIRP43119 386 aa7.4□□□□□ -1.22
RNU6-88P-201ENST00000606801 GDF10P55107 478 aa7.4□□□□□ -1.22
RNU6-88P-201ENST00000606801 SEC13P55735 322 aa7.4□□□□□ -1.22
RNU6-88P-201ENST00000606801 CYP2U1Q7Z449 544 aa7.4□□□□□ -1.22
RNU6-88P-201ENST00000606801 XAGE2Q96GT9 111 aa7.4□□□□□ -1.22
RNU6-88P-201ENST00000606801 RAB6BQ9NRW1 208 aa7.4□□□□□ -1.22
RNU6-88P-201ENST00000606801 SOS2Q07890 1332 aaPredicted RBP7.4□□□□□ -1.22
RNU6-88P-201ENST00000606801 SOBPA7XYQ1 873 aa7.39□□□□□ -1.23
RNU6-88P-201ENST00000606801 LGR5O75473 907 aa7.39□□□□□ -1.23
RNU6-88P-201ENST00000606801 INHAP05111 366 aa7.39□□□□□ -1.23
RNU6-88P-201ENST00000606801 EPHA4P54764 986 aa7.39□□□□□ -1.23
RNU6-88P-201ENST00000606801 RELBQ01201 579 aa7.39□□□□□ -1.23
RNU6-88P-201ENST00000606801 PSME1Q06323 249 aa7.39□□□□□ -1.23
RNU6-88P-201ENST00000606801 SLC4A9Q96Q91 983 aa7.39□□□□□ -1.23
RNU6-88P-201ENST00000606801 ARHGEF10LQ9HCE6 1279 aa7.39□□□□□ -1.23
RNU6-88P-201ENST00000606801 A0A1W2PRU2 124 aa7.38□□□□□ -1.23
RNU6-88P-201ENST00000606801 M0R2N6 131 aa7.38□□□□□ -1.23
RNU6-88P-201ENST00000606801 TERTO14746 1132 aaKnown RBP7.38□□□□□ -1.23
RNU6-88P-201ENST00000606801 NFX1Q12986 1120 aaKnown RBP7.38□□□□□ -1.23
RNU6-88P-201ENST00000606801 PHLDB3Q6NSJ2 640 aa7.38□□□□□ -1.23
RNU6-88P-201ENST00000606801 TREML4Q6UXN2 200 aa7.38□□□□□ -1.23
RNU6-88P-201ENST00000606801 TSEN2Q8NCE0 465 aaKnown RBP7.38□□□□□ -1.23
RNU6-88P-201ENST00000606801 ESF1Q9H501 851 aaKnown RBP7.38□□□□□ -1.23
RNU6-88P-201ENST00000606801 ZNF395Q9H8N7 513 aaPredicted RBP7.38□□□□□ -1.23
RNU6-88P-201ENST00000606801 TTLL8A6PVC2 850 aa7.37□□□□□ -1.23
RNU6-88P-201ENST00000606801 MAN1A2O60476 641 aa7.37□□□□□ -1.23
RNU6-88P-201ENST00000606801 PDIA4P13667 645 aaKnown RBP7.37□□□□□ -1.23
RNU6-88P-201ENST00000606801 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
RNU6-88P-201ENST00000606801 TNS4Q8IZW8 715 aa7.37□□□□□ -1.23
RNU6-88P-201ENST00000606801 GAS2L2Q8NHY3 880 aa7.37□□□□□ -1.23
RNU6-88P-201ENST00000606801 CLP1Q92989 425 aaKnown RBP7.37□□□□□ -1.23
RNU6-88P-201ENST00000606801 NXF1Q9UBU9 619 aaKnown RBP7.37□□□□□ -1.23
RNU6-88P-201ENST00000606801 SERTAD1Q9UHV2 236 aa7.37□□□□□ -1.23
RNU6-88P-201ENST00000606801 DNMT3LQ9UJW3 386 aa7.37□□□□□ -1.23
RNU6-88P-201ENST00000606801 CLN3Q13286 438 aa7.36□□□□□ -1.23
RNU6-88P-201ENST00000606801 OCLNQ16625 522 aa7.36□□□□□ -1.23
RNU6-88P-201ENST00000606801 CNKSR1Q969H4 720 aa7.36□□□□□ -1.23
RNU6-88P-201ENST00000606801 ESYT1Q9BSJ8 1104 aa7.36□□□□□ -1.23
RNU6-88P-201ENST00000606801 FHDC1Q9C0D6 1143 aaPredicted RBP7.36□□□□□ -1.23
RNU6-88P-201ENST00000606801 USP3Q9Y6I4 520 aa7.36□□□□□ -1.23
RNU6-88P-201ENST00000606801 WFS1O76024 890 aa7.35□□□□□ -1.23
RNU6-88P-201ENST00000606801 MTFR1Q15390 333 aa7.35□□□□□ -1.23
RNU6-88P-201ENST00000606801 SWI5Q1ZZU3 235 aa7.35□□□□□ -1.23
RNU6-88P-201ENST00000606801 NPAS3Q8IXF0 933 aa7.35□□□□□ -1.23
RNU6-88P-201ENST00000606801 INSM2Q96T92 566 aaPredicted RBP7.35□□□□□ -1.23
RNU6-88P-201ENST00000606801 FIGNL2A6NMB9 653 aa7.34□□□□□ -1.23
RNU6-88P-201ENST00000606801 C21orf2O43822 256 aa7.34□□□□□ -1.23
RNU6-88P-201ENST00000606801 SSFA2P28290 1259 aa7.34□□□□□ -1.23
RNU6-88P-201ENST00000606801 WEE1P30291 646 aa7.34□□□□□ -1.23
RNU6-88P-201ENST00000606801 CTSOP43234 321 aaPredicted RBP7.34□□□□□ -1.23
RNU6-88P-201ENST00000606801 SMTNP53814 917 aa7.34□□□□□ -1.23
RNU6-88P-201ENST00000606801 FOXK2Q01167 660 aa7.34□□□□□ -1.23
RNU6-88P-201ENST00000606801 CENPCQ03188 943 aa7.34□□□□□ -1.23
RNU6-88P-201ENST00000606801 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.34□□□□□ -1.23
RNU6-88P-201ENST00000606801 ZNF295-AS1Q8N0V1 137 aa7.34□□□□□ -1.23
RNU6-88P-201ENST00000606801 PRIMPOLQ96LW4 560 aa7.34□□□□□ -1.23
RNU6-88P-201ENST00000606801 IQSEC3Q9UPP2 1182 aaPredicted RBP7.34□□□□□ -1.23
RNU6-88P-201ENST00000606801 A6NJY4 79 aa7.33□□□□□ -1.24
RNU6-88P-201ENST00000606801 PRMT3O60678 531 aa7.33□□□□□ -1.24
RNU6-88P-201ENST00000606801 SCNN1AP37088 669 aa7.33□□□□□ -1.24
RNU6-88P-201ENST00000606801 ESCO1Q5FWF5 840 aa7.33□□□□□ -1.24
RNU6-88P-201ENST00000606801 HINFPQ9BQA5 517 aa7.33□□□□□ -1.24
RNU6-88P-201ENST00000606801 POLMQ9NP87 494 aaPredicted RBP7.33□□□□□ -1.24
RNU6-88P-201ENST00000606801 H3BM21 787 aa7.32□□□□□ -1.24
RNU6-88P-201ENST00000606801 MEN1O00255 615 aa7.32□□□□□ -1.24
RNU6-88P-201ENST00000606801 BACH1O14867 736 aa7.32□□□□□ -1.24
RNU6-88P-201ENST00000606801 PDE4CQ08493 712 aa7.32□□□□□ -1.24
RNU6-88P-201ENST00000606801 FOXD4L5Q5VV16 416 aaPredicted RBP7.32□□□□□ -1.24
RNU6-88P-201ENST00000606801 RNF217Q8TC41 542 aa7.32□□□□□ -1.24
RNU6-88P-201ENST00000606801 GRIP2Q9C0E4 1043 aa7.32□□□□□ -1.24
RNU6-88P-201ENST00000606801 TSPAN10Q9H1Z9 355 aaPredicted RBP7.32□□□□□ -1.24
RNU6-88P-201ENST00000606801 SCHIP1Q9P0W5 487 aaPredicted RBP7.32□□□□□ -1.24
RNU6-88P-201ENST00000606801 RBM19Q9Y4C8 960 aaKnown RBP7.32□□□□□ -1.24
RNU6-88P-201ENST00000606801 ATAD2Q6PL18 1390 aa7.32□□□□□ -1.24
RNU6-88P-201ENST00000606801 VEGFBP49765 207 aa7.31□□□□□ -1.24
RNU6-88P-201ENST00000606801 RNF144AP50876 292 aaPredicted RBP7.31□□□□□ -1.24
RNU6-88P-201ENST00000606801 TBCELQ5QJ74 424 aa7.31□□□□□ -1.24
RNU6-88P-201ENST00000606801 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
RNU6-88P-201ENST00000606801 CAPN12Q6ZSI9 719 aa7.31□□□□□ -1.24
RNU6-88P-201ENST00000606801 SLC16A10Q8TF71 515 aa7.31□□□□□ -1.24
RNU6-88P-201ENST00000606801 CXXC1Q9P0U4 656 aaPredicted RBP7.31□□□□□ -1.24
RNU6-88P-201ENST00000606801 CDK2AP1O14519 115 aa7.3□□□□□ -1.24
RNU6-88P-201ENST00000606801 BRD1O95696 1058 aa7.3□□□□□ -1.24
RNU6-88P-201ENST00000606801 ATP2B4P23634 1241 aa7.3□□□□□ -1.24
RNU6-88P-201ENST00000606801 TLR1Q15399 786 aa7.3□□□□□ -1.24
RNU6-88P-201ENST00000606801 TAS1R3Q7RTX0 852 aa7.3□□□□□ -1.24
RNU6-88P-201ENST00000606801 PPFIA3O75145 1194 aa7.29□□□□□ -1.24
RNU6-88P-201ENST00000606801 PTSQ03393 145 aa7.29□□□□□ -1.24
RNU6-88P-201ENST00000606801 TRIM26Q12899 539 aaPredicted RBP7.29□□□□□ -1.24
RNU6-88P-201ENST00000606801 FKBP5Q13451 457 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms