RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 KDM6AO15550 1401 aaPredicted RBP18.13■□□□□ 0.49
CTSA-213ENST00000606782 MSH5O43196 834 aa18.12■□□□□ 0.49
CTSA-213ENST00000606782 SSFA2P28290 1259 aa18.12■□□□□ 0.49
CTSA-213ENST00000606782 ZNF831Q5JPB2 1677 aa18.12■□□□□ 0.49
CTSA-213ENST00000606782 ATP6V1AP38606 617 aa18.11■□□□□ 0.49
CTSA-213ENST00000606782 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.1■□□□□ 0.49
CTSA-213ENST00000606782 SLC4A9Q96Q91 983 aa18.1■□□□□ 0.49
CTSA-213ENST00000606782 C1orf141Q5JVX7 400 aa18.09■□□□□ 0.49
CTSA-213ENST00000606782 CABP4P57796 275 aa18.08■□□□□ 0.48
CTSA-213ENST00000606782 RC3H1Q5TC82 1133 aaKnown RBP18.08■□□□□ 0.48
CTSA-213ENST00000606782 MSL1Q68DK7 614 aa18.08■□□□□ 0.48
CTSA-213ENST00000606782 NLGN2Q8NFZ4 835 aa18.08■□□□□ 0.48
CTSA-213ENST00000606782 CC2D1BQ5T0F9 858 aaKnown RBP18.07■□□□□ 0.48
CTSA-213ENST00000606782 CD2APQ9Y5K6 639 aa18.07■□□□□ 0.48
CTSA-213ENST00000606782 CHD4Q14839 1912 aa18.07■□□□□ 0.48
CTSA-213ENST00000606782 UTRNP46939 3433 aa18.07■□□□□ 0.48
CTSA-213ENST00000606782 ZNF316A6NFI3 1004 aaPredicted RBP18.06■□□□□ 0.48
CTSA-213ENST00000606782 DIAPH1O60610 1272 aaKnown RBP18.06■□□□□ 0.48
CTSA-213ENST00000606782 AKAP4Q5JQC9 854 aa18.06■□□□□ 0.48
CTSA-213ENST00000606782 GNPATO15228 680 aa18.05■□□□□ 0.48
CTSA-213ENST00000606782 GPR162Q16538 588 aa18.05■□□□□ 0.48
CTSA-213ENST00000606782 SMIM5Q71RC9 77 aa18.05■□□□□ 0.48
CTSA-213ENST00000606782 KLHL34Q8N239 644 aa18.05■□□□□ 0.48
CTSA-213ENST00000606782 NFATC2IPQ8NCF5 419 aa18.05■□□□□ 0.48
CTSA-213ENST00000606782 CNTNAP4Q9C0A0 1308 aa18.04■□□□□ 0.48
CTSA-213ENST00000606782 PHF14O94880 888 aa18.04■□□□□ 0.48
CTSA-213ENST00000606782 RBM42Q9BTD8 480 aaKnown RBP18.04■□□□□ 0.48
CTSA-213ENST00000606782 SCN11AQ9UI33 1791 aa18.04■□□□□ 0.48
CTSA-213ENST00000606782 COL3A1P02461 1466 aaPredicted RBP18.03■□□□□ 0.48
CTSA-213ENST00000606782 ADRA2BP18089 450 aa18.03■□□□□ 0.48
CTSA-213ENST00000606782 HMOX1P09601 288 aa18.02■□□□□ 0.48
CTSA-213ENST00000606782 COL5A3P25940 1745 aaPredicted RBP18.02■□□□□ 0.48
CTSA-213ENST00000606782 RTCBQ9Y3I0 505 aaKnown RBP18.02■□□□□ 0.48
CTSA-213ENST00000606782 RPS6KA4O75676 772 aa18.01■□□□□ 0.47
CTSA-213ENST00000606782 TRAPPC3LQ5T215 181 aa18.01■□□□□ 0.47
CTSA-213ENST00000606782 ZNF784Q8NCA9 323 aaPredicted RBP18.01■□□□□ 0.47
CTSA-213ENST00000606782 SLC52A2Q9HAB3 445 aa18.01■□□□□ 0.47
CTSA-213ENST00000606782 CICQ96RK0 1608 aaPredicted RBP18.01■□□□□ 0.47
CTSA-213ENST00000606782 MRC1P22897 1456 aa18.01■□□□□ 0.47
CTSA-213ENST00000606782 MYH14Q7Z406 1995 aaKnown RBP18■□□□□ 0.47
CTSA-213ENST00000606782 ADAMTS7Q9UKP4 1686 aa18■□□□□ 0.47
CTSA-213ENST00000606782 RNMTO43148 476 aaKnown RBP18■□□□□ 0.47
CTSA-213ENST00000606782 GRIN3BO60391 1043 aa18■□□□□ 0.47
CTSA-213ENST00000606782 MTHFSDQ2M296 383 aaKnown RBP18■□□□□ 0.47
CTSA-213ENST00000606782 LGR6Q9HBX8 967 aa18■□□□□ 0.47
CTSA-213ENST00000606782 PTCD1O75127 700 aaKnown RBP17.99■□□□□ 0.47
CTSA-213ENST00000606782 YBX3P16989 372 aaKnown RBP eCLIP17.99■□□□□ 0.47
CTSA-213ENST00000606782 NLGN1Q8N2Q7 840 aa17.98■□□□□ 0.47
CTSA-213ENST00000606782 ARHGEF1Q92888 912 aaKnown RBP17.98■□□□□ 0.47
CTSA-213ENST00000606782 MMP10P09238 476 aa17.96■□□□□ 0.47
CTSA-213ENST00000606782 CRKLP46109 303 aaKnown RBP17.96■□□□□ 0.47
CTSA-213ENST00000606782 PELP1Q8IZL8 1130 aaKnown RBP17.96■□□□□ 0.47
CTSA-213ENST00000606782 GYS1P13807 737 aa17.95■□□□□ 0.46
CTSA-213ENST00000606782 TJP1Q07157 1748 aa17.95■□□□□ 0.46
CTSA-213ENST00000606782 RFC4P35249 363 aa17.94■□□□□ 0.46
CTSA-213ENST00000606782 INTS5Q6P9B9 1019 aaKnown RBP17.94■□□□□ 0.46
CTSA-213ENST00000606782 GOLGB1Q14789 3259 aaKnown RBP17.93■□□□□ 0.46
CTSA-213ENST00000606782 VSIG10Q8N0Z9 540 aa17.93■□□□□ 0.46
CTSA-213ENST00000606782 VIRMAQ69YN4 1812 aaKnown RBP17.93■□□□□ 0.46
CTSA-213ENST00000606782 U2SURPO15042 1029 aaKnown RBP17.92■□□□□ 0.46
CTSA-213ENST00000606782 DDX10Q13206 875 aaKnown RBP17.92■□□□□ 0.46
CTSA-213ENST00000606782 DNAJC10Q8IXB1 793 aa17.92■□□□□ 0.46
CTSA-213ENST00000606782 GAS2L2Q8NHY3 880 aa17.92■□□□□ 0.46
CTSA-213ENST00000606782 CFAP53Q96M91 514 aa17.92■□□□□ 0.46
CTSA-213ENST00000606782 KIF13BQ9NQT8 1826 aa17.92■□□□□ 0.46
CTSA-213ENST00000606782 KCPQ6ZWJ8 1503 aa17.92■□□□□ 0.46
CTSA-213ENST00000606782 CYP19A1P11511 503 aaPredicted RBP17.91■□□□□ 0.46
CTSA-213ENST00000606782 PPP2R1AP30153 589 aa17.91■□□□□ 0.46
CTSA-213ENST00000606782 SLC39A6Q13433 755 aa17.91■□□□□ 0.46
CTSA-213ENST00000606782 IL17REQ8NFR9 667 aa17.91■□□□□ 0.46
CTSA-213ENST00000606782 C4AP0C0L4 1744 aa17.91■□□□□ 0.46
CTSA-213ENST00000606782 GNAT3A8MTJ3 354 aa17.9■□□□□ 0.46
CTSA-213ENST00000606782 TGFB2P61812 414 aa17.9■□□□□ 0.46
CTSA-213ENST00000606782 CNGB1Q14028 1251 aaPredicted RBP17.9■□□□□ 0.46
CTSA-213ENST00000606782 RSPH6AQ9H0K4 717 aa17.9■□□□□ 0.46
CTSA-213ENST00000606782 CCDC87Q9NVE4 849 aa17.9■□□□□ 0.46
CTSA-213ENST00000606782 USP42Q9H9J4 1324 aaKnown RBP17.9■□□□□ 0.46
CTSA-213ENST00000606782 C10orf71Q711Q0 1435 aa17.89■□□□□ 0.46
CTSA-213ENST00000606782 SOS1Q07889 1333 aaPredicted RBP17.89■□□□□ 0.45
CTSA-213ENST00000606782 CEMIPQ8WUJ3 1361 aa17.89■□□□□ 0.45
CTSA-213ENST00000606782 PHACTR3Q96KR7 559 aa17.88■□□□□ 0.45
CTSA-213ENST00000606782 NUDCQ9Y266 331 aa17.88■□□□□ 0.45
CTSA-213ENST00000606782 UBR2Q8IWV8 1755 aa17.88■□□□□ 0.45
CTSA-213ENST00000606782 PXDNLA1KZ92 1463 aa17.88■□□□□ 0.45
CTSA-213ENST00000606782 SRP68Q9UHB9 627 aaKnown RBP17.87■□□□□ 0.45
CTSA-213ENST00000606782 PARP3Q9Y6F1 533 aa17.87■□□□□ 0.45
CTSA-213ENST00000606782 KIAA1551Q9HCM1 1747 aa17.86■□□□□ 0.45
CTSA-213ENST00000606782 FCHSD2O94868 740 aa17.86■□□□□ 0.45
CTSA-213ENST00000606782 TM4SF1P30408 202 aa17.86■□□□□ 0.45
CTSA-213ENST00000606782 PRKAR2BP31323 418 aa17.86■□□□□ 0.45
CTSA-213ENST00000606782 FKBP8Q14318 412 aa17.86■□□□□ 0.45
CTSA-213ENST00000606782 SIPA1L3O60292 1781 aaPredicted RBP17.85■□□□□ 0.45
CTSA-213ENST00000606782 TEFQ10587 303 aa17.85■□□□□ 0.45
CTSA-213ENST00000606782 ZNF790Q6PG37 636 aa17.85■□□□□ 0.45
CTSA-213ENST00000606782 DDR1Q08345 913 aa17.84■□□□□ 0.45
CTSA-213ENST00000606782 TTC5Q8N0Z6 440 aa17.84■□□□□ 0.45
CTSA-213ENST00000606782 ZNF496Q96IT1 587 aaPredicted RBP17.84■□□□□ 0.45
CTSA-213ENST00000606782 NARFQ9UHQ1 456 aa17.84■□□□□ 0.45
CTSA-213ENST00000606782 ZBTB1Q9Y2K1 713 aa17.84■□□□□ 0.45
CTSA-213ENST00000606782 ADCY9O60503 1353 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms