RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	CCDC39	Q9UFE4	941 aa		4.8	□□□□□ -1.64
KCNMA1-223	ENST00000604624	RPGRIP1L	Q68CZ1	1315 aa		4.8	□□□□□ -1.64
KCNMA1-223	ENST00000604624	XBP1	P17861	261 aa		4.8	□□□□□ -1.64
KCNMA1-223	ENST00000604624	CCDC158	Q5M9N0	1113 aa		4.8	□□□□□ -1.64
KCNMA1-223	ENST00000604624	PHF23	Q9BUL5	403 aa	Predicted RBP	4.8	□□□□□ -1.64
KCNMA1-223	ENST00000604624	SSX2IP	Q9Y2D8	614 aa		4.8	□□□□□ -1.64
KCNMA1-223	ENST00000604624	KDM6B	O15054	1643 aa		4.8	□□□□□ -1.64
KCNMA1-223	ENST00000604624	DACT3	Q96B18	629 aa	Predicted RBP	4.8	□□□□□ -1.64
KCNMA1-223	ENST00000604624	ZMYND15	Q9H091	742 aa		4.8	□□□□□ -1.64
KCNMA1-223	ENST00000604624	NOL3	O60936	208 aa	Known RBP	4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	MRE11	P49959	708 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	DNA2	P51530	1060 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	C6orf163	Q5TEZ5	329 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	MPND	Q8N594	471 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	FBF1	Q8TES7	1133 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	SYCP2	Q9BX26	1530 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	SIRT1	Q96EB6	747 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	CPSF2	Q9P2I0	782 aa	Known RBP	4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	RCAN3	Q9UKA8	241 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	CD109	Q6YHK3	1445 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	MXRA7	P84157	204 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	ATP2B2	Q01814	1243 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	DDX46	Q7L014	1031 aa	Known RBP	4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	SPATA31D1	Q6ZQQ2	1576 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	DCAF8L1	A6NGE4	600 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	CASQ1	P31415	396 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	SPECC1	Q5M775	1068 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	RALYL	Q86SE5	291 aa	Known RBP	4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	HOOK3	Q86VS8	718 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	ZC4H2	Q9NQZ6	224 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	SH3BP5	O60239	455 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	PRR16	Q569H4	304 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	FAM107B	Q9H098	131 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	LUZP1	Q86V48	1076 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	PDCD7	Q8N8D1	485 aa	Known RBP	4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	CEP120	Q8N960	986 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	STK26	Q9P289	416 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	SMC3	Q9UQE7	1217 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	PPP1R14C	Q8TAE6	165 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	MADD	Q8WXG6	1647 aa		4.79	□□□□□ -1.64
KCNMA1-223	ENST00000604624	CCDC170	Q8IYT3	715 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	TECPR2	O15040	1411 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	CTNNA2	P26232	953 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	ATIC	P31939	592 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	CA8	P35219	290 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	JAKMIP3	Q5VZ66	844 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	RNF20	Q5VTR2	975 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	PPFIBP1	Q86W92	1011 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	ODF2L	Q9ULJ1	636 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	A2M	P01023	1474 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	UQCRHL	A0A096LP55	91 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	MYZAP	P0CAP1	466 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	GTF2A1	P52655	376 aa	Predicted RBP	4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	LTV1	Q96GA3	475 aa	Predicted RBP	4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624		V9GYY5	206 aa	Predicted RBP	4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	HECW2	Q9P2P5	1572 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	KIAA1328	Q86T90	577 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	ADGRB3	O60242	1522 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	BICDL2	A1A5D9	508 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	REC8	O95072	547 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	KIF5C	O60282	957 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	UQCRH	P07919	91 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	FAM161A	Q3B820	660 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	ZBTB41	Q5SVQ8	909 aa		4.78	□□□□□ -1.64
KCNMA1-223	ENST00000604624	DIP2C	Q9Y2E4	1556 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ZCRB1	Q8TBF4	217 aa	Known RBP	4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	MKRN1	Q9UHC7	482 aa	Known RBP	4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	MORC4	Q8TE76	937 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ERVK-7	P63135	1459 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	MLEC	Q14165	292 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CAVIN1	Q6NZI2	390 aa	Known RBP	4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CTAGE6	Q86UF2	777 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	NPAT	Q14207	1427 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SLU7	O95391	586 aa	Known RBP	4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CEP57	Q86XR8	500 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SYNM	O15061	1565 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ATP2C2	O75185	946 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	MAP7D1	Q3KQU3	841 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CCDC178	Q5BJE1	867 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ZHX1	Q9UKY1	873 aa	Predicted RBP	4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PPME1	Q9Y570	386 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	GNL1	P36915	607 aa	Predicted RBP	4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	DNAAF4	Q8WXU2	420 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	KDM5A	P29375	1690 aa	Known RBP	4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	POLD1	P28340	1107 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ERC1	Q8IUD2	1116 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SMC6	Q96SB8	1091 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ROCK2	O75116	1388 aa	Known RBP	4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	IRX3	P78415	501 aa	Predicted RBP	4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	IKBKG	Q9Y6K9	419 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CDC42BPA	Q5VT25	1732 aa		4.77	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ZC3H13	Q5T200	1668 aa	Known RBP	4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	RUFY2	Q8WXA3	655 aa		4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	POLR3G	O15318	223 aa	Predicted RBP	4.76	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ZFY	P08048	801 aa	Predicted RBP	4.76	□□□□□ -1.65

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