RNA–Protein interactions for RNA: ENST00000602272.5

FARP1-241, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-241ENST00000602272 ABCA6Q8N139 1617 aa10.51□□□□□ -0.73
FARP1-241ENST00000602272 MLH3Q9UHC1 1453 aa10.5□□□□□ -0.73
FARP1-241ENST00000602272 KIDINS220Q9ULH0 1771 aa10.5□□□□□ -0.73
FARP1-241ENST00000602272 PER1O15534 1290 aaPredicted RBP10.5□□□□□ -0.73
FARP1-241ENST00000602272 CTDSPL2Q05D32 466 aa10.5□□□□□ -0.73
FARP1-241ENST00000602272 IRF7Q92985 503 aa10.5□□□□□ -0.73
FARP1-241ENST00000602272 DIP2CQ9Y2E4 1556 aa10.5□□□□□ -0.73
FARP1-241ENST00000602272 YEATS2Q9ULM3 1422 aa10.5□□□□□ -0.73
FARP1-241ENST00000602272 CCDC141Q6ZP82 1450 aa10.49□□□□□ -0.73
FARP1-241ENST00000602272 USP17L8P0C7I0 530 aa10.49□□□□□ -0.73
FARP1-241ENST00000602272 HNRNPMP52272 730 aaKnown RBP eCLIP10.49□□□□□ -0.73
FARP1-241ENST00000602272 AFAP1Q8N556 730 aa10.49□□□□□ -0.73
FARP1-241ENST00000602272 KLF16Q9BXK1 252 aaPredicted RBP10.49□□□□□ -0.73
FARP1-241ENST00000602272 CROCC2H7BZ55 1655 aa10.49□□□□□ -0.73
FARP1-241ENST00000602272 ATP7AQ04656 1500 aa10.48□□□□□ -0.73
FARP1-241ENST00000602272 DNMT1P26358 1616 aaKnown RBP10.48□□□□□ -0.73
FARP1-241ENST00000602272 SIGLEC1Q9BZZ2 1709 aa10.48□□□□□ -0.73
FARP1-241ENST00000602272 MCM6Q14566 821 aa10.48□□□□□ -0.73
FARP1-241ENST00000602272 GPKOWQ92917 476 aaPredicted RBP eCLIP10.48□□□□□ -0.73
FARP1-241ENST00000602272 SNRKQ9NRH2 765 aa10.48□□□□□ -0.73
FARP1-241ENST00000602272 REREQ9P2R6 1566 aa10.48□□□□□ -0.73
FARP1-241ENST00000602272 MAST1Q9Y2H9 1570 aa10.48□□□□□ -0.73
FARP1-241ENST00000602272 FLIIQ13045 1269 aa10.47□□□□□ -0.73
FARP1-241ENST00000602272 PPARGC1BQ86YN6 1023 aaKnown RBP10.47□□□□□ -0.73
FARP1-241ENST00000602272 FAM181BA6NEQ2 426 aa10.46□□□□□ -0.73
FARP1-241ENST00000602272 C9orf84Q5VXU9 1444 aa10.46□□□□□ -0.74
FARP1-241ENST00000602272 ATP10AO60312 1499 aa10.46□□□□□ -0.74
FARP1-241ENST00000602272 ADGBQ8N7X0 1667 aa10.46□□□□□ -0.74
FARP1-241ENST00000602272 RTEL1-TNFRSF6BF6WH68 1400 aa10.45□□□□□ -0.74
FARP1-241ENST00000602272 SPAG9O60271 1321 aaKnown RBP10.45□□□□□ -0.74
FARP1-241ENST00000602272 H3BM21 787 aa10.45□□□□□ -0.74
FARP1-241ENST00000602272 UPP2O95045 317 aa10.45□□□□□ -0.74
FARP1-241ENST00000602272 ZIC2O95409 532 aaPredicted RBP10.45□□□□□ -0.74
FARP1-241ENST00000602272 GRM5P41594 1212 aa10.45□□□□□ -0.74
FARP1-241ENST00000602272 C4orf48Q5BLP8 95 aa10.45□□□□□ -0.74
FARP1-241ENST00000602272 MTMR14Q8NCE2 650 aa10.45□□□□□ -0.74
FARP1-241ENST00000602272 LRRN4Q8WUT4 740 aa10.45□□□□□ -0.74
FARP1-241ENST00000602272 PURBQ96QR8 312 aaKnown RBP10.45□□□□□ -0.74
FARP1-241ENST00000602272 C1QTNF2Q9BXJ5 285 aa10.45□□□□□ -0.74
FARP1-241ENST00000602272 MAP4K5Q9Y4K4 846 aa10.45□□□□□ -0.74
FARP1-241ENST00000602272 SHANK2Q9UPX8 1470 aa10.44□□□□□ -0.74
FARP1-241ENST00000602272 LCE2CQ5TA81 110 aa10.44□□□□□ -0.74
FARP1-241ENST00000602272 SH3RF1Q7Z6J0 888 aa10.44□□□□□ -0.74
FARP1-241ENST00000602272 TRMT44Q8IYL2 757 aaKnown RBP10.44□□□□□ -0.74
FARP1-241ENST00000602272 HMX1Q9NP08 348 aaPredicted RBP10.44□□□□□ -0.74
FARP1-241ENST00000602272 PLXNC1O60486 1568 aa10.43□□□□□ -0.74
FARP1-241ENST00000602272 ABCC5O15440 1437 aa10.43□□□□□ -0.74
FARP1-241ENST00000602272 DAPK1P53355 1430 aa10.43□□□□□ -0.74
FARP1-241ENST00000602272 BCORL1Q5H9F3 1711 aa10.43□□□□□ -0.74
FARP1-241ENST00000602272 RRBP1Q9P2E9 1410 aaKnown RBP10.42□□□□□ -0.74
FARP1-241ENST00000602272 SOCS7O14512 581 aa10.42□□□□□ -0.74
FARP1-241ENST00000602272 VASH1Q7L8A9 365 aaPredicted RBP10.42□□□□□ -0.74
FARP1-241ENST00000602272 SH3BP5LQ7L8J4 393 aa10.42□□□□□ -0.74
FARP1-241ENST00000602272 ITPKCQ96DU7 683 aa10.42□□□□□ -0.74
FARP1-241ENST00000602272 AGLP35573 1532 aa10.42□□□□□ -0.74
FARP1-241ENST00000602272 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.41□□□□□ -0.74
FARP1-241ENST00000602272 NR3C2P08235 984 aa10.41□□□□□ -0.74
FARP1-241ENST00000602272 ZFAND3Q9H8U3 227 aa10.41□□□□□ -0.74
FARP1-241ENST00000602272 A2MP01023 1474 aa10.41□□□□□ -0.74
FARP1-241ENST00000602272 ADAMTSL3P82987 1691 aa10.41□□□□□ -0.74
FARP1-241ENST00000602272 TSPY4P0CV99 314 aa10.4□□□□□ -0.74
FARP1-241ENST00000602272 TSPY10P0CW01 314 aa10.4□□□□□ -0.74
FARP1-241ENST00000602272 FAM50AQ14320 339 aaKnown RBP10.4□□□□□ -0.74
FARP1-241ENST00000602272 GJD4Q96KN9 370 aaPredicted RBP10.4□□□□□ -0.74
FARP1-241ENST00000602272 EMILIN1Q9Y6C2 1016 aa10.4□□□□□ -0.74
FARP1-241ENST00000602272 MAGEB6P1A0A0J9YX57 407 aa10.39□□□□□ -0.75
FARP1-241ENST00000602272 MAN1A2O60476 641 aa10.39□□□□□ -0.75
FARP1-241ENST00000602272 GMPRP36959 345 aa10.39□□□□□ -0.75
FARP1-241ENST00000602272 TRIM34Q9BYJ4 488 aa10.39□□□□□ -0.75
FARP1-241ENST00000602272 ADGRL2O95490 1459 aa10.38□□□□□ -0.75
FARP1-241ENST00000602272 MADDQ8WXG6 1647 aa10.38□□□□□ -0.75
FARP1-241ENST00000602272 EIF2AK4Q9P2K8 1649 aaKnown RBP10.38□□□□□ -0.75
FARP1-241ENST00000602272 FSHRP23945 695 aa10.38□□□□□ -0.75
FARP1-241ENST00000602272 PDXDC2PQ6P474 469 aa10.38□□□□□ -0.75
FARP1-241ENST00000602272 CDV3Q9UKY7 258 aaKnown RBP10.38□□□□□ -0.75
FARP1-241ENST00000602272 TIMELESSQ9UNS1 1208 aa10.38□□□□□ -0.75
FARP1-241ENST00000602272 ARID4BQ4LE39 1312 aaPredicted RBP10.37□□□□□ -0.75
FARP1-241ENST00000602272 FER1L4A9Z1Z3 1794 aa10.37□□□□□ -0.75
FARP1-241ENST00000602272 BMP2P12643 396 aa10.37□□□□□ -0.75
FARP1-241ENST00000602272 VEGFBP49765 207 aa10.37□□□□□ -0.75
FARP1-241ENST00000602272 C6orf118Q5T5N4 469 aa10.37□□□□□ -0.75
FARP1-241ENST00000602272 C14orf37Q86TY3 774 aa10.37□□□□□ -0.75
FARP1-241ENST00000602272 MEIOBQ8N635 442 aa10.37□□□□□ -0.75
FARP1-241ENST00000602272 ZSCAN1Q8NBB4 408 aa10.37□□□□□ -0.75
FARP1-241ENST00000602272 EPS8L1Q8TE68 723 aa10.37□□□□□ -0.75
FARP1-241ENST00000602272 TSEN34Q9BSV6 310 aaKnown RBP10.37□□□□□ -0.75
FARP1-241ENST00000602272 DUOX2Q9NRD8 1548 aa10.37□□□□□ -0.75
FARP1-241ENST00000602272 ZC3H4Q9UPT8 1303 aaKnown RBP10.36□□□□□ -0.75
FARP1-241ENST00000602272 PTPRKQ15262 1439 aa10.36□□□□□ -0.75
FARP1-241ENST00000602272 NR6A1Q15406 480 aa10.36□□□□□ -0.75
FARP1-241ENST00000602272 CCDC116Q8IYX3 515 aa10.36□□□□□ -0.75
FARP1-241ENST00000602272 LINC00528Q8N1L1 170 aa10.36□□□□□ -0.75
FARP1-241ENST00000602272 DHX29Q7Z478 1369 aaKnown RBP10.36□□□□□ -0.75
FARP1-241ENST00000602272 RIMS1Q86UR5 1692 aaKnown RBP10.35□□□□□ -0.75
FARP1-241ENST00000602272 POM121Q96HA1 1249 aa10.35□□□□□ -0.75
FARP1-241ENST00000602272 FKBPLQ9UIM3 349 aa10.35□□□□□ -0.75
FARP1-241ENST00000602272 ANKRD30AQ9BXX3 1397 aa10.35□□□□□ -0.75
FARP1-241ENST00000602272 NCOA1Q15788 1441 aa10.34□□□□□ -0.75
FARP1-241ENST00000602272 RNF17Q9BXT8 1623 aaKnown RBP10.34□□□□□ -0.75
FARP1-241ENST00000602272 VSIG8P0DPA2 414 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms