RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 LOC102724428A0A0B4J2F2 783 aa12.49□□□□□ -0.41
FARP1-226ENST00000599040 ERVV-2B6SEH9 535 aa12.49□□□□□ -0.41
FARP1-226ENST00000599040 SIK1P57059 783 aa12.49□□□□□ -0.41
FARP1-226ENST00000599040 GPR162Q16538 588 aa12.49□□□□□ -0.41
FARP1-226ENST00000599040 C1orf141Q5JVX7 400 aa12.49□□□□□ -0.41
FARP1-226ENST00000599040 CC2D1BQ5T0F9 858 aaKnown RBP12.49□□□□□ -0.41
FARP1-226ENST00000599040 COL23A1Q86Y22 540 aaPredicted RBP12.49□□□□□ -0.41
FARP1-226ENST00000599040 DCAF5Q96JK2 942 aa12.49□□□□□ -0.41
FARP1-226ENST00000599040 SSFA2P28290 1259 aa12.47□□□□□ -0.41
FARP1-226ENST00000599040 ZNF530Q6P9A1 599 aaPredicted RBP12.47□□□□□ -0.41
FARP1-226ENST00000599040 ATP6V1AP38606 617 aa12.46□□□□□ -0.41
FARP1-226ENST00000599040 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.41
FARP1-226ENST00000599040 ASAP1Q9ULH1 1129 aa12.46□□□□□ -0.41
FARP1-226ENST00000599040 UBR3Q6ZT12 1888 aa12.46□□□□□ -0.42
FARP1-226ENST00000599040 KDRP35968 1356 aa12.45□□□□□ -0.42
FARP1-226ENST00000599040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.45□□□□□ -0.42
FARP1-226ENST00000599040 PHF14O94880 888 aa12.45□□□□□ -0.42
FARP1-226ENST00000599040 MTHFSP49914 203 aa12.45□□□□□ -0.42
FARP1-226ENST00000599040 CABP4P57796 275 aa12.45□□□□□ -0.42
FARP1-226ENST00000599040 MSL1Q68DK7 614 aa12.45□□□□□ -0.42
FARP1-226ENST00000599040 SULT6B1Q6IMI4 303 aa12.45□□□□□ -0.42
FARP1-226ENST00000599040 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
FARP1-226ENST00000599040 ZNF831Q5JPB2 1677 aa12.45□□□□□ -0.42
FARP1-226ENST00000599040 GNPATO15228 680 aa12.44□□□□□ -0.42
FARP1-226ENST00000599040 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
FARP1-226ENST00000599040 IL13P35225 146 aa12.44□□□□□ -0.42
FARP1-226ENST00000599040 LINC00116Q8NCU8 138 aa12.44□□□□□ -0.42
FARP1-226ENST00000599040 ATG3Q9NT62 314 aa12.44□□□□□ -0.42
FARP1-226ENST00000599040 CD2APQ9Y5K6 639 aa12.44□□□□□ -0.42
FARP1-226ENST00000599040 AEBP1Q8IUX7 1158 aa12.43□□□□□ -0.42
FARP1-226ENST00000599040 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
FARP1-226ENST00000599040 ADRA2BP18089 450 aa12.42□□□□□ -0.42
FARP1-226ENST00000599040 NLGN2Q8NFZ4 835 aa12.42□□□□□ -0.42
FARP1-226ENST00000599040 RTCBQ9Y3I0 505 aaKnown RBP12.42□□□□□ -0.42
FARP1-226ENST00000599040 KDM6AO15550 1401 aaPredicted RBP12.42□□□□□ -0.42
FARP1-226ENST00000599040 DIAPH1O60610 1272 aaKnown RBP12.41□□□□□ -0.42
FARP1-226ENST00000599040 ITPK1Q13572 414 aa12.41□□□□□ -0.42
FARP1-226ENST00000599040 AKAP4Q5JQC9 854 aa12.41□□□□□ -0.42
FARP1-226ENST00000599040 RC3H1Q5TC82 1133 aaKnown RBP12.41□□□□□ -0.42
FARP1-226ENST00000599040 FAM9BQ8IZU0 186 aa12.41□□□□□ -0.42
FARP1-226ENST00000599040 CFAP53Q96M91 514 aa12.41□□□□□ -0.42
FARP1-226ENST00000599040 CNTNAP4Q9C0A0 1308 aa12.4□□□□□ -0.42
FARP1-226ENST00000599040 TRAPPC3LQ5T215 181 aa12.4□□□□□ -0.42
FARP1-226ENST00000599040 ZNF784Q8NCA9 323 aaPredicted RBP12.4□□□□□ -0.42
FARP1-226ENST00000599040 SCN11AQ9UI33 1791 aa12.39□□□□□ -0.43
FARP1-226ENST00000599040 PPP2R1AP30153 589 aa12.39□□□□□ -0.43
FARP1-226ENST00000599040 WDR43Q15061 677 aaKnown RBP eCLIP12.39□□□□□ -0.43
FARP1-226ENST00000599040 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
FARP1-226ENST00000599040 COL5A3P25940 1745 aaPredicted RBP12.39□□□□□ -0.43
FARP1-226ENST00000599040 RFC4P35249 363 aa12.38□□□□□ -0.43
FARP1-226ENST00000599040 AMIGO3Q86WK7 504 aa12.38□□□□□ -0.43
FARP1-226ENST00000599040 NLGN1Q8N2Q7 840 aa12.38□□□□□ -0.43
FARP1-226ENST00000599040 PTCD1O75127 700 aaKnown RBP12.37□□□□□ -0.43
FARP1-226ENST00000599040 RPS6KA4O75676 772 aa12.37□□□□□ -0.43
FARP1-226ENST00000599040 HMOX1P09601 288 aa12.37□□□□□ -0.43
FARP1-226ENST00000599040 HNRNPUQ00839 825 aaKnown RBP eCLIP12.37□□□□□ -0.43
FARP1-226ENST00000599040 SLC4A9Q96Q91 983 aa12.36□□□□□ -0.43
FARP1-226ENST00000599040 SLC52A2Q9HAB3 445 aa12.36□□□□□ -0.43
FARP1-226ENST00000599040 CICQ96RK0 1608 aaPredicted RBP12.36□□□□□ -0.43
FARP1-226ENST00000599040 MRC1P22897 1456 aa12.35□□□□□ -0.43
FARP1-226ENST00000599040 MMP10P09238 476 aa12.35□□□□□ -0.43
FARP1-226ENST00000599040 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
FARP1-226ENST00000599040 SMIM5Q71RC9 77 aa12.35□□□□□ -0.43
FARP1-226ENST00000599040 VIRMAQ69YN4 1812 aaKnown RBP12.34□□□□□ -0.43
FARP1-226ENST00000599040 U2SURPO15042 1029 aaKnown RBP12.34□□□□□ -0.43
FARP1-226ENST00000599040 RNMTO43148 476 aaKnown RBP12.34□□□□□ -0.43
FARP1-226ENST00000599040 CRKLP46109 303 aaKnown RBP12.34□□□□□ -0.43
FARP1-226ENST00000599040 GAS2L2Q8NHY3 880 aa12.34□□□□□ -0.43
FARP1-226ENST00000599040 PNISRQ8TF01 805 aaKnown RBP12.34□□□□□ -0.43
FARP1-226ENST00000599040 ARHGEF1Q92888 912 aaKnown RBP12.34□□□□□ -0.43
FARP1-226ENST00000599040 CCDC87Q9NVE4 849 aa12.34□□□□□ -0.43
FARP1-226ENST00000599040 PARP3Q9Y6F1 533 aa12.34□□□□□ -0.43
FARP1-226ENST00000599040 MYH14Q7Z406 1995 aaKnown RBP12.33□□□□□ -0.44
FARP1-226ENST00000599040 MTHFSDQ2M296 383 aaKnown RBP12.33□□□□□ -0.44
FARP1-226ENST00000599040 CCDC184Q52MB2 194 aa12.33□□□□□ -0.44
FARP1-226ENST00000599040 NUDCQ9Y266 331 aa12.33□□□□□ -0.44
FARP1-226ENST00000599040 TJP1Q07157 1748 aa12.33□□□□□ -0.44
FARP1-226ENST00000599040 C4AP0C0L4 1744 aa12.32□□□□□ -0.44
FARP1-226ENST00000599040 GYS1P13807 737 aa12.32□□□□□ -0.44
FARP1-226ENST00000599040 TGFB2P61812 414 aa12.32□□□□□ -0.44
FARP1-226ENST00000599040 TTC5Q8N0Z6 440 aa12.32□□□□□ -0.44
FARP1-226ENST00000599040 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
FARP1-226ENST00000599040 COL3A1P02461 1466 aaPredicted RBP12.32□□□□□ -0.44
FARP1-226ENST00000599040 KIF13BQ9NQT8 1826 aa12.32□□□□□ -0.44
FARP1-226ENST00000599040 ADAMTS7Q9UKP4 1686 aa12.32□□□□□ -0.44
FARP1-226ENST00000599040 GNAT3A8MTJ3 354 aa12.31□□□□□ -0.44
FARP1-226ENST00000599040 ZPR1O75312 459 aa12.31□□□□□ -0.44
FARP1-226ENST00000599040 GIGYF1O75420 1035 aaPredicted RBP12.31□□□□□ -0.44
FARP1-226ENST00000599040 TEFQ10587 303 aa12.31□□□□□ -0.44
FARP1-226ENST00000599040 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
FARP1-226ENST00000599040 C10orf71Q711Q0 1435 aa12.3□□□□□ -0.44
FARP1-226ENST00000599040 PNNQ9H307 717 aaKnown RBP12.3□□□□□ -0.44
FARP1-226ENST00000599040 USP42Q9H9J4 1324 aaKnown RBP12.3□□□□□ -0.44
FARP1-226ENST00000599040 STARD3NLO95772 234 aa12.29□□□□□ -0.44
FARP1-226ENST00000599040 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
FARP1-226ENST00000599040 DNAJC10Q8IXB1 793 aa12.29□□□□□ -0.44
FARP1-226ENST00000599040 ZBED9Q6R2W3 1325 aa12.29□□□□□ -0.44
FARP1-226ENST00000599040 PXDNLA1KZ92 1463 aa12.28□□□□□ -0.44
FARP1-226ENST00000599040 KCPQ6ZWJ8 1503 aa12.28□□□□□ -0.44
FARP1-226ENST00000599040 CYP19A1P11511 503 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms