RNA–Protein interactions for RNA: ENST00000598758.5

TGFB1-203, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-203ENST00000598758 GGNBP2Q9H3C7 697 aa13.2□□□□□ -0.3
TGFB1-203ENST00000598758 ZNF831Q5JPB2 1677 aa13.19□□□□□ -0.3
TGFB1-203ENST00000598758 FYB1O15117 783 aa13.19□□□□□ -0.3
TGFB1-203ENST00000598758 SMARCC1Q92922 1105 aaPredicted RBP13.19□□□□□ -0.3
TGFB1-203ENST00000598758 FLT4P35916 1363 aa13.19□□□□□ -0.3
TGFB1-203ENST00000598758 LOC102724428A0A0B4J2F2 783 aa13.18□□□□□ -0.3
TGFB1-203ENST00000598758 TOMM70O94826 608 aa13.18□□□□□ -0.3
TGFB1-203ENST00000598758 MMP10P09238 476 aa13.18□□□□□ -0.3
TGFB1-203ENST00000598758 SIK1P57059 783 aa13.18□□□□□ -0.3
TGFB1-203ENST00000598758 TNRC6CQ9HCJ0 1690 aaKnown RBP13.18□□□□□ -0.3
TGFB1-203ENST00000598758 GNPATO15228 680 aa13.17□□□□□ -0.3
TGFB1-203ENST00000598758 COL13A1Q5TAT6 717 aaPredicted RBP13.17□□□□□ -0.3
TGFB1-203ENST00000598758 KDRP35968 1356 aa13.17□□□□□ -0.3
TGFB1-203ENST00000598758 ST20-MTHFSA0A0A6YYL1 179 aa13.16□□□□□ -0.3
TGFB1-203ENST00000598758 A0A0G2JLW4 131 aa13.16□□□□□ -0.3
TGFB1-203ENST00000598758 NKX1-1Q15270 411 aaPredicted RBP13.16□□□□□ -0.3
TGFB1-203ENST00000598758 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
TGFB1-203ENST00000598758 BCS1LQ9Y276 419 aa13.16□□□□□ -0.3
TGFB1-203ENST00000598758 KCPQ6ZWJ8 1503 aa13.15□□□□□ -0.3
TGFB1-203ENST00000598758 EMILIN1Q9Y6C2 1016 aa13.15□□□□□ -0.3
TGFB1-203ENST00000598758 KIF24Q5T7B8 1368 aa13.15□□□□□ -0.3
TGFB1-203ENST00000598758 DPEP1P16444 411 aa13.14□□□□□ -0.31
TGFB1-203ENST00000598758 HMGB2P26583 209 aaKnown RBP13.14□□□□□ -0.31
TGFB1-203ENST00000598758 KLRG1Q96E93 195 aa13.14□□□□□ -0.31
TGFB1-203ENST00000598758 CCDC88AQ3V6T2 1871 aa13.14□□□□□ -0.31
TGFB1-203ENST00000598758 CAPN15O75808 1086 aa13.13□□□□□ -0.31
TGFB1-203ENST00000598758 ATP6V1AP38606 617 aa13.13□□□□□ -0.31
TGFB1-203ENST00000598758 ARHGAP27Q6ZUM4 889 aa13.13□□□□□ -0.31
TGFB1-203ENST00000598758 JMYQ8N9B5 988 aa13.13□□□□□ -0.31
TGFB1-203ENST00000598758 RBM46Q8TBY0 533 aaKnown RBP13.13□□□□□ -0.31
TGFB1-203ENST00000598758 SLC4A9Q96Q91 983 aa13.13□□□□□ -0.31
TGFB1-203ENST00000598758 ADAMTS7Q9UKP4 1686 aa13.12□□□□□ -0.31
TGFB1-203ENST00000598758 KCNA3P22001 575 aa13.12□□□□□ -0.31
TGFB1-203ENST00000598758 TGFB2P61812 414 aa13.12□□□□□ -0.31
TGFB1-203ENST00000598758 ATG3Q9NT62 314 aa13.12□□□□□ -0.31
TGFB1-203ENST00000598758 TMOD3Q9NYL9 352 aa13.12□□□□□ -0.31
TGFB1-203ENST00000598758 TJP1Q07157 1748 aa13.12□□□□□ -0.31
TGFB1-203ENST00000598758 PLEKHG2Q9H7P9 1386 aa13.11□□□□□ -0.31
TGFB1-203ENST00000598758 FCHSD2O94868 740 aa13.11□□□□□ -0.31
TGFB1-203ENST00000598758 C9orf131Q5VYM1 1079 aa13.11□□□□□ -0.31
TGFB1-203ENST00000598758 AFDNP55196 1824 aaKnown RBP13.11□□□□□ -0.31
TGFB1-203ENST00000598758 TIAM2Q8IVF5 1701 aa13.1□□□□□ -0.31
TGFB1-203ENST00000598758 TONSLQ96HA7 1378 aa13.1□□□□□ -0.31
TGFB1-203ENST00000598758 DLEC1Q9Y238 1755 aa13.1□□□□□ -0.31
TGFB1-203ENST00000598758 GYS1P13807 737 aa13.1□□□□□ -0.31
TGFB1-203ENST00000598758 PHKG2P15735 406 aa13.1□□□□□ -0.31
TGFB1-203ENST00000598758 ZBTB22O15209 634 aa13.09□□□□□ -0.31
TGFB1-203ENST00000598758 TMF1P82094 1093 aa13.09□□□□□ -0.31
TGFB1-203ENST00000598758 ARHGEF1Q92888 912 aaKnown RBP13.09□□□□□ -0.31
TGFB1-203ENST00000598758 EYA1Q99502 592 aa13.09□□□□□ -0.31
TGFB1-203ENST00000598758 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
TGFB1-203ENST00000598758 FSTL1Q12841 308 aa13.08□□□□□ -0.32
TGFB1-203ENST00000598758 TRAPPC3LQ5T215 181 aa13.08□□□□□ -0.32
TGFB1-203ENST00000598758 NLGN1Q8N2Q7 840 aa13.08□□□□□ -0.32
TGFB1-203ENST00000598758 CARD14Q9BXL6 1004 aa13.08□□□□□ -0.32
TGFB1-203ENST00000598758 CCDC87Q9NVE4 849 aa13.08□□□□□ -0.32
TGFB1-203ENST00000598758 RTCBQ9Y3I0 505 aaKnown RBP13.08□□□□□ -0.32
TGFB1-203ENST00000598758 VIRMAQ69YN4 1812 aaKnown RBP13.08□□□□□ -0.32
TGFB1-203ENST00000598758 DCAF5Q96JK2 942 aa13.07□□□□□ -0.32
TGFB1-203ENST00000598758 FOXD4L1Q9NU39 408 aa13.07□□□□□ -0.32
TGFB1-203ENST00000598758 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.07□□□□□ -0.32
TGFB1-203ENST00000598758 CNTNAP4Q9C0A0 1308 aa13.07□□□□□ -0.32
TGFB1-203ENST00000598758 KDM6AO15550 1401 aaPredicted RBP13.06□□□□□ -0.32
TGFB1-203ENST00000598758 DDR1Q08345 913 aa13.06□□□□□ -0.32
TGFB1-203ENST00000598758 C16orf71Q8IYS4 520 aaPredicted RBP13.06□□□□□ -0.32
TGFB1-203ENST00000598758 IFNL2Q8IZJ0 200 aa13.06□□□□□ -0.32
TGFB1-203ENST00000598758 TNS4Q8IZW8 715 aa13.06□□□□□ -0.32
TGFB1-203ENST00000598758 RRAGCQ9HB90 399 aa13.06□□□□□ -0.32
TGFB1-203ENST00000598758 RNF181Q9P0P0 153 aa13.06□□□□□ -0.32
TGFB1-203ENST00000598758 NRXN2Q9P2S2 1712 aa13.05□□□□□ -0.32
TGFB1-203ENST00000598758 PPM1GO15355 546 aaPredicted RBP13.05□□□□□ -0.32
TGFB1-203ENST00000598758 PRELPP51888 382 aa13.05□□□□□ -0.32
TGFB1-203ENST00000598758 RC3H1Q5TC82 1133 aaKnown RBP13.05□□□□□ -0.32
TGFB1-203ENST00000598758 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
TGFB1-203ENST00000598758 SRP68Q9UHB9 627 aaKnown RBP13.05□□□□□ -0.32
TGFB1-203ENST00000598758 PARP3Q9Y6F1 533 aa13.05□□□□□ -0.32
TGFB1-203ENST00000598758 WASHC2AQ641Q2 1341 aa13.05□□□□□ -0.32
TGFB1-203ENST00000598758 SCN11AQ9UI33 1791 aa13.04□□□□□ -0.32
TGFB1-203ENST00000598758 RPS6KA4O75676 772 aa13.04□□□□□ -0.32
TGFB1-203ENST00000598758 CHRNA5P30532 468 aa13.04□□□□□ -0.32
TGFB1-203ENST00000598758 KDM2BQ8NHM5 1336 aa13.04□□□□□ -0.32
TGFB1-203ENST00000598758 DICER1Q9UPY3 1922 aaKnown RBP13.03□□□□□ -0.32
TGFB1-203ENST00000598758 RFC4P35249 363 aa13.03□□□□□ -0.32
TGFB1-203ENST00000598758 FKBP8Q14318 412 aa13.03□□□□□ -0.32
TGFB1-203ENST00000598758 DALRD3Q5D0E6 543 aaKnown RBP13.03□□□□□ -0.32
TGFB1-203ENST00000598758 PIM2Q9P1W9 311 aa13.03□□□□□ -0.32
TGFB1-203ENST00000598758 RASSF7Q02833 373 aa13.02□□□□□ -0.33
TGFB1-203ENST00000598758 EIF4A2Q14240 407 aaKnown RBP13.02□□□□□ -0.33
TGFB1-203ENST00000598758 POLKQ9UBT6 870 aa13.02□□□□□ -0.33
TGFB1-203ENST00000598758 ERVV-2B6SEH9 535 aa13.01□□□□□ -0.33
TGFB1-203ENST00000598758 HSPA1AP0DMV8 641 aaKnown RBP13.01□□□□□ -0.33
TGFB1-203ENST00000598758 HSPA1BP0DMV9 641 aaKnown RBP13.01□□□□□ -0.33
TGFB1-203ENST00000598758 SMC1BQ8NDV3 1235 aa13.01□□□□□ -0.33
TGFB1-203ENST00000598758 USP42Q9H9J4 1324 aaKnown RBP13.01□□□□□ -0.33
TGFB1-203ENST00000598758 ANKRD31Q8N7Z5 1873 aa13.01□□□□□ -0.33
TGFB1-203ENST00000598758 CACNA1SQ13698 1873 aa13□□□□□ -0.33
TGFB1-203ENST00000598758 SLC24A1O60721 1099 aa13□□□□□ -0.33
TGFB1-203ENST00000598758 CRKLP46109 303 aaKnown RBP13□□□□□ -0.33
TGFB1-203ENST00000598758 COL11A2P13942 1736 aaPredicted RBP12.99□□□□□ -0.33
TGFB1-203ENST00000598758 POLRMTO00411 1230 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms