RNA–Protein interactions for RNA: ENST00000595817.5

FARP1-215, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 778 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-215ENST00000595817 RBM42Q9BTD8 480 aaKnown RBP14.8□□□□□ -0.04
FARP1-215ENST00000595817 ATG3Q9NT62 314 aa14.8□□□□□ -0.04
FARP1-215ENST00000595817 TUBGCP6Q96RT7 1819 aa14.8□□□□□ -0.04
FARP1-215ENST00000595817 LINC00116Q8NCU8 138 aa14.79□□□□□ -0.04
FARP1-215ENST00000595817 MAP3K5Q99683 1374 aa14.79□□□□□ -0.04
FARP1-215ENST00000595817 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.78□□□□□ -0.04
FARP1-215ENST00000595817 GNPATO15228 680 aa14.78□□□□□ -0.04
FARP1-215ENST00000595817 PER1O15534 1290 aaPredicted RBP14.78□□□□□ -0.04
FARP1-215ENST00000595817 C4BP0C0L5 1744 aa14.78□□□□□ -0.04
FARP1-215ENST00000595817 DIAPH1O60610 1272 aaKnown RBP14.77□□□□□ -0.05
FARP1-215ENST00000595817 HMOX1P09601 288 aa14.77□□□□□ -0.05
FARP1-215ENST00000595817 ITPK1Q13572 414 aa14.77□□□□□ -0.05
FARP1-215ENST00000595817 SSFA2P28290 1259 aa14.76□□□□□ -0.05
FARP1-215ENST00000595817 SMIM5Q71RC9 77 aa14.76□□□□□ -0.05
FARP1-215ENST00000595817 KDM6AO15550 1401 aaPredicted RBP14.75□□□□□ -0.05
FARP1-215ENST00000595817 KDRP35968 1356 aa14.75□□□□□ -0.05
FARP1-215ENST00000595817 U2SURPO15042 1029 aaKnown RBP14.75□□□□□ -0.05
FARP1-215ENST00000595817 NLGN2Q8NFZ4 835 aa14.75□□□□□ -0.05
FARP1-215ENST00000595817 TAF1LQ8IZX4 1826 aa14.75□□□□□ -0.05
FARP1-215ENST00000595817 PTCD1O75127 700 aaKnown RBP14.74□□□□□ -0.05
FARP1-215ENST00000595817 AKAP4Q5JQC9 854 aa14.74□□□□□ -0.05
FARP1-215ENST00000595817 AMIGO3Q86WK7 504 aa14.74□□□□□ -0.05
FARP1-215ENST00000595817 NFATC2IPQ8NCF5 419 aa14.74□□□□□ -0.05
FARP1-215ENST00000595817 RTCBQ9Y3I0 505 aaKnown RBP14.74□□□□□ -0.05
FARP1-215ENST00000595817 NPC1L1Q9UHC9 1359 aa14.73□□□□□ -0.05
FARP1-215ENST00000595817 TRAPPC3LQ5T215 181 aa14.72□□□□□ -0.05
FARP1-215ENST00000595817 CFAP53Q96M91 514 aa14.72□□□□□ -0.05
FARP1-215ENST00000595817 CD2APQ9Y5K6 639 aa14.71□□□□□ -0.05
FARP1-215ENST00000595817 SLC4A9Q96Q91 983 aa14.7□□□□□ -0.06
FARP1-215ENST00000595817 COL24A1Q17RW2 1714 aa14.69□□□□□ -0.06
FARP1-215ENST00000595817 CNTNAP4Q9C0A0 1308 aa14.69□□□□□ -0.06
FARP1-215ENST00000595817 RFC4P35249 363 aa14.69□□□□□ -0.06
FARP1-215ENST00000595817 ZEB1P37275 1124 aaPredicted RBP14.69□□□□□ -0.06
FARP1-215ENST00000595817 MTHFSDQ2M296 383 aaKnown RBP14.69□□□□□ -0.06
FARP1-215ENST00000595817 SLC52A2Q9HAB3 445 aa14.69□□□□□ -0.06
FARP1-215ENST00000595817 LGR6Q9HBX8 967 aa14.69□□□□□ -0.06
FARP1-215ENST00000595817 UBR3Q6ZT12 1888 aa14.69□□□□□ -0.06
FARP1-215ENST00000595817 RNMTO43148 476 aaKnown RBP14.68□□□□□ -0.06
FARP1-215ENST00000595817 GRIN3BO60391 1043 aa14.68□□□□□ -0.06
FARP1-215ENST00000595817 RC3H1Q5TC82 1133 aaKnown RBP14.68□□□□□ -0.06
FARP1-215ENST00000595817 RPS6KA4O75676 772 aa14.67□□□□□ -0.06
FARP1-215ENST00000595817 MMP10P09238 476 aa14.67□□□□□ -0.06
FARP1-215ENST00000595817 CRKLP46109 303 aaKnown RBP14.67□□□□□ -0.06
FARP1-215ENST00000595817 ARHGEF1Q92888 912 aaKnown RBP14.67□□□□□ -0.06
FARP1-215ENST00000595817 NUDCQ9Y266 331 aa14.67□□□□□ -0.06
FARP1-215ENST00000595817 YBX3P16989 372 aaKnown RBP eCLIP14.66□□□□□ -0.06
FARP1-215ENST00000595817 SLC39A6Q13433 755 aa14.66□□□□□ -0.06
FARP1-215ENST00000595817 NLGN1Q8N2Q7 840 aa14.66□□□□□ -0.06
FARP1-215ENST00000595817 ZNF784Q8NCA9 323 aaPredicted RBP14.66□□□□□ -0.06
FARP1-215ENST00000595817 GAS2L2Q8NHY3 880 aa14.66□□□□□ -0.06
FARP1-215ENST00000595817 WWC3Q9ULE0 1092 aa14.66□□□□□ -0.06
FARP1-215ENST00000595817 TEFQ10587 303 aa14.65□□□□□ -0.06
FARP1-215ENST00000595817 COL3A1P02461 1466 aaPredicted RBP14.64□□□□□ -0.07
FARP1-215ENST00000595817 DNAJC10Q8IXB1 793 aa14.64□□□□□ -0.07
FARP1-215ENST00000595817 TTC5Q8N0Z6 440 aa14.64□□□□□ -0.07
FARP1-215ENST00000595817 SCN11AQ9UI33 1791 aa14.63□□□□□ -0.07
FARP1-215ENST00000595817 ZNF831Q5JPB2 1677 aa14.63□□□□□ -0.07
FARP1-215ENST00000595817 GNAT3A8MTJ3 354 aa14.63□□□□□ -0.07
FARP1-215ENST00000595817 U2AF1L5P0DN76 240 aaPredicted RBP14.63□□□□□ -0.07
FARP1-215ENST00000595817 PPP2R1AP30153 589 aa14.63□□□□□ -0.07
FARP1-215ENST00000595817 PRKAR2BP31323 418 aa14.63□□□□□ -0.07
FARP1-215ENST00000595817 U2AF1Q01081 240 aaKnown RBP eCLIP14.63□□□□□ -0.07
FARP1-215ENST00000595817 PARP3Q9Y6F1 533 aa14.63□□□□□ -0.07
FARP1-215ENST00000595817 GYS1P13807 737 aa14.62□□□□□ -0.07
FARP1-215ENST00000595817 CCDC87Q9NVE4 849 aa14.62□□□□□ -0.07
FARP1-215ENST00000595817 COL5A3P25940 1745 aaPredicted RBP14.61□□□□□ -0.07
FARP1-215ENST00000595817 CHD4Q14839 1912 aa14.61□□□□□ -0.07
FARP1-215ENST00000595817 ZPR1O75312 459 aa14.61□□□□□ -0.07
FARP1-215ENST00000595817 SRP68Q9UHB9 627 aaKnown RBP14.61□□□□□ -0.07
FARP1-215ENST00000595817 MRC1P22897 1456 aa14.61□□□□□ -0.07
FARP1-215ENST00000595817 UTRNP46939 3433 aa14.61□□□□□ -0.07
FARP1-215ENST00000595817 INTS5Q6P9B9 1019 aaKnown RBP14.6□□□□□ -0.07
FARP1-215ENST00000595817 CICQ96RK0 1608 aaPredicted RBP14.59□□□□□ -0.07
FARP1-215ENST00000595817 RTF1Q92541 710 aaKnown RBP14.59□□□□□ -0.07
FARP1-215ENST00000595817 RSPH6AQ9H0K4 717 aa14.59□□□□□ -0.07
FARP1-215ENST00000595817 USP42Q9H9J4 1324 aaKnown RBP14.59□□□□□ -0.07
FARP1-215ENST00000595817 STARD3NLO95772 234 aa14.58□□□□□ -0.08
FARP1-215ENST00000595817 NEFMP07197 916 aa14.58□□□□□ -0.08
FARP1-215ENST00000595817 CYP19A1P11511 503 aaPredicted RBP14.58□□□□□ -0.08
FARP1-215ENST00000595817 CANXP27824 592 aaKnown RBP14.58□□□□□ -0.08
FARP1-215ENST00000595817 VSIG10Q8N0Z9 540 aa14.58□□□□□ -0.08
FARP1-215ENST00000595817 IL17REQ8NFR9 667 aa14.58□□□□□ -0.08
FARP1-215ENST00000595817 PHACTR3Q96KR7 559 aa14.58□□□□□ -0.08
FARP1-215ENST00000595817 TJP1Q07157 1748 aa14.58□□□□□ -0.08
FARP1-215ENST00000595817 GOLGB1Q14789 3259 aaKnown RBP14.57□□□□□ -0.08
FARP1-215ENST00000595817 TGFB2P61812 414 aa14.57□□□□□ -0.08
FARP1-215ENST00000595817 FKBP8Q14318 412 aa14.57□□□□□ -0.08
FARP1-215ENST00000595817 USPL1Q5W0Q7 1092 aa14.57□□□□□ -0.08
FARP1-215ENST00000595817 NPM2Q86SE8 214 aaKnown RBP14.57□□□□□ -0.08
FARP1-215ENST00000595817 BCS1LQ9Y276 419 aa14.57□□□□□ -0.08
FARP1-215ENST00000595817 ZBTB1Q9Y2K1 713 aa14.57□□□□□ -0.08
FARP1-215ENST00000595817 ZNF330Q9Y3S2 320 aaPredicted RBP14.57□□□□□ -0.08
FARP1-215ENST00000595817 SOS1Q07889 1333 aaPredicted RBP14.57□□□□□ -0.08
FARP1-215ENST00000595817 KCPQ6ZWJ8 1503 aa14.56□□□□□ -0.08
FARP1-215ENST00000595817 MYH14Q7Z406 1995 aaKnown RBP14.56□□□□□ -0.08
FARP1-215ENST00000595817 A0A0G2JLW4 131 aa14.56□□□□□ -0.08
FARP1-215ENST00000595817 FCHSD2O94868 740 aa14.56□□□□□ -0.08
FARP1-215ENST00000595817 ZNF790Q6PG37 636 aa14.56□□□□□ -0.08
FARP1-215ENST00000595817 COL15A1P39059 1388 aa14.56□□□□□ -0.08
FARP1-215ENST00000595817 C10orf71Q711Q0 1435 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms