RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 MSH5O43196 834 aa21.58■■□□□ 1.05
IRF3-210ENST00000595240 PPP2R1AP30153 589 aa21.58■■□□□ 1.05
IRF3-210ENST00000595240 ATP6V1AP38606 617 aa21.58■■□□□ 1.05
IRF3-210ENST00000595240 AMIGO3Q86WK7 504 aa21.58■■□□□ 1.05
IRF3-210ENST00000595240 SYT17Q9BSW7 474 aa21.58■■□□□ 1.05
IRF3-210ENST00000595240 COL24A1Q17RW2 1714 aa21.58■■□□□ 1.04
IRF3-210ENST00000595240 U2SURPO15042 1029 aaKnown RBP21.57■■□□□ 1.04
IRF3-210ENST00000595240 POLD1P28340 1107 aa21.57■■□□□ 1.04
IRF3-210ENST00000595240 MTHFSDQ2M296 383 aaKnown RBP21.57■■□□□ 1.04
IRF3-210ENST00000595240 NFATC2IPQ8NCF5 419 aa21.57■■□□□ 1.04
IRF3-210ENST00000595240 CFAP53Q96M91 514 aa21.57■■□□□ 1.04
IRF3-210ENST00000595240 SLC4A9Q96Q91 983 aa21.57■■□□□ 1.04
IRF3-210ENST00000595240 MAP3K5Q99683 1374 aa21.57■■□□□ 1.04
IRF3-210ENST00000595240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.54■■□□□ 1.04
IRF3-210ENST00000595240 SSFA2P28290 1259 aa21.54■■□□□ 1.04
IRF3-210ENST00000595240 RBM42Q9BTD8 480 aaKnown RBP21.54■■□□□ 1.04
IRF3-210ENST00000595240 LGR6Q9HBX8 967 aa21.54■■□□□ 1.04
IRF3-210ENST00000595240 RNMTO43148 476 aaKnown RBP21.53■■□□□ 1.04
IRF3-210ENST00000595240 SMIM5Q71RC9 77 aa21.53■■□□□ 1.04
IRF3-210ENST00000595240 SLC52A2Q9HAB3 445 aa21.53■■□□□ 1.04
IRF3-210ENST00000595240 ZNF831Q5JPB2 1677 aa21.53■■□□□ 1.04
IRF3-210ENST00000595240 MRC1P22897 1456 aa21.52■■□□□ 1.04
IRF3-210ENST00000595240 GNPATO15228 680 aa21.52■■□□□ 1.04
IRF3-210ENST00000595240 PHF14O94880 888 aa21.52■■□□□ 1.04
IRF3-210ENST00000595240 MSL1Q68DK7 614 aa21.52■■□□□ 1.04
IRF3-210ENST00000595240 SCN11AQ9UI33 1791 aa21.51■■□□□ 1.03
IRF3-210ENST00000595240 UBR3Q6ZT12 1888 aa21.51■■□□□ 1.03
IRF3-210ENST00000595240 DCAF8L1A6NGE4 600 aa21.5■■□□□ 1.03
IRF3-210ENST00000595240 PTCD1O75127 700 aaKnown RBP21.5■■□□□ 1.03
IRF3-210ENST00000595240 NUDCQ9Y266 331 aa21.5■■□□□ 1.03
IRF3-210ENST00000595240 ADAMTS7Q9UKP4 1686 aa21.5■■□□□ 1.03
IRF3-210ENST00000595240 RC3H1Q5TC82 1133 aaKnown RBP21.49■■□□□ 1.03
IRF3-210ENST00000595240 GAS2L2Q8NHY3 880 aa21.49■■□□□ 1.03
IRF3-210ENST00000595240 RSPH6AQ9H0K4 717 aa21.49■■□□□ 1.03
IRF3-210ENST00000595240 CNTNAP4Q9C0A0 1308 aa21.49■■□□□ 1.03
IRF3-210ENST00000595240 PRKAR2BP31323 418 aa21.47■■□□□ 1.03
IRF3-210ENST00000595240 PHACTR3Q96KR7 559 aa21.47■■□□□ 1.03
IRF3-210ENST00000595240 U2AF1L5P0DN76 240 aaPredicted RBP21.46■■□□□ 1.03
IRF3-210ENST00000595240 U2AF1Q01081 240 aaKnown RBP eCLIP21.46■■□□□ 1.03
IRF3-210ENST00000595240 RTCBQ9Y3I0 505 aaKnown RBP21.46■■□□□ 1.03
IRF3-210ENST00000595240 GNAT3A8MTJ3 354 aa21.45■■□□□ 1.02
IRF3-210ENST00000595240 KLHL34Q8N239 644 aa21.45■■□□□ 1.02
IRF3-210ENST00000595240 COL5A3P25940 1745 aaPredicted RBP21.45■■□□□ 1.02
IRF3-210ENST00000595240 RPS6KA4O75676 772 aa21.44■■□□□ 1.02
IRF3-210ENST00000595240 FCHSD2O94868 740 aa21.44■■□□□ 1.02
IRF3-210ENST00000595240 ADRA2BP18089 450 aa21.44■■□□□ 1.02
IRF3-210ENST00000595240 SLC39A6Q13433 755 aa21.44■■□□□ 1.02
IRF3-210ENST00000595240 IL17REQ8NFR9 667 aa21.44■■□□□ 1.02
IRF3-210ENST00000595240 CICQ96RK0 1608 aaPredicted RBP21.44■■□□□ 1.02
IRF3-210ENST00000595240 TRAPPC3LQ5T215 181 aa21.43■■□□□ 1.02
IRF3-210ENST00000595240 CRKLP46109 303 aaKnown RBP21.42■■□□□ 1.02
IRF3-210ENST00000595240 NLGN2Q8NFZ4 835 aa21.42■■□□□ 1.02
IRF3-210ENST00000595240 KCPQ6ZWJ8 1503 aa21.41■■□□□ 1.02
IRF3-210ENST00000595240 CEMIPQ8WUJ3 1361 aa21.41■■□□□ 1.02
IRF3-210ENST00000595240 ARHGEF1Q92888 912 aaKnown RBP21.41■■□□□ 1.02
IRF3-210ENST00000595240 TJP1Q07157 1748 aa21.41■■□□□ 1.02
IRF3-210ENST00000595240 DDX10Q13206 875 aaKnown RBP21.4■■□□□ 1.02
IRF3-210ENST00000595240 INTS5Q6P9B9 1019 aaKnown RBP21.4■■□□□ 1.02
IRF3-210ENST00000595240 DNAJC10Q8IXB1 793 aa21.4■■□□□ 1.02
IRF3-210ENST00000595240 CD2APQ9Y5K6 639 aa21.4■■□□□ 1.02
IRF3-210ENST00000595240 TEFQ10587 303 aa21.39■■□□□ 1.01
IRF3-210ENST00000595240 MYH14Q7Z406 1995 aaKnown RBP21.38■■□□□ 1.01
IRF3-210ENST00000595240 VSIG10Q8N0Z9 540 aa21.38■■□□□ 1.01
IRF3-210ENST00000595240 UTRNP46939 3433 aa21.38■■□□□ 1.01
IRF3-210ENST00000595240 CYP19A1P11511 503 aaPredicted RBP21.37■■□□□ 1.01
IRF3-210ENST00000595240 YY1P25490 414 aa21.37■■□□□ 1.01
IRF3-210ENST00000595240 RFC4P35249 363 aa21.37■■□□□ 1.01
IRF3-210ENST00000595240 RALBP1Q15311 655 aa21.37■■□□□ 1.01
IRF3-210ENST00000595240 VIRMAQ69YN4 1812 aaKnown RBP21.36■■□□□ 1.01
IRF3-210ENST00000595240 MMP10P09238 476 aa21.36■■□□□ 1.01
IRF3-210ENST00000595240 GYS1P13807 737 aa21.36■■□□□ 1.01
IRF3-210ENST00000595240 GPR162Q16538 588 aa21.36■■□□□ 1.01
IRF3-210ENST00000595240 NLGN1Q8N2Q7 840 aa21.36■■□□□ 1.01
IRF3-210ENST00000595240 CCDC87Q9NVE4 849 aa21.36■■□□□ 1.01
IRF3-210ENST00000595240 ZNF790Q6PG37 636 aa21.35■■□□□ 1.01
IRF3-210ENST00000595240 TTC5Q8N0Z6 440 aa21.35■■□□□ 1.01
IRF3-210ENST00000595240 UBR2Q8IWV8 1755 aa21.34■■□□□ 1.01
IRF3-210ENST00000595240 ZNF496Q96IT1 587 aaPredicted RBP21.34■■□□□ 1.01
IRF3-210ENST00000595240 SOS1Q07889 1333 aaPredicted RBP21.33■■□□□ 1.01
IRF3-210ENST00000595240 USP42Q9H9J4 1324 aaKnown RBP21.32■■□□□ 1
IRF3-210ENST00000595240 HTATSF1O43719 755 aaKnown RBP21.32■■□□□ 1
IRF3-210ENST00000595240 RTF1Q92541 710 aaKnown RBP21.32■■□□□ 1
IRF3-210ENST00000595240 PLEKHF1Q96S99 279 aa21.32■■□□□ 1
IRF3-210ENST00000595240 SIPA1L3O60292 1781 aaPredicted RBP21.32■■□□□ 1
IRF3-210ENST00000595240 GOLGB1Q14789 3259 aaKnown RBP21.31■■□□□ 1
IRF3-210ENST00000595240 MCM10Q7L590 875 aa21.31■■□□□ 1
IRF3-210ENST00000595240 SRP68Q9UHB9 627 aaKnown RBP21.31■■□□□ 1
IRF3-210ENST00000595240 C4AP0C0L4 1744 aa21.31■■□□□ 1
IRF3-210ENST00000595240 HEG1Q9ULI3 1381 aa21.31■■□□□ 1
IRF3-210ENST00000595240 BTBD11A6QL63 1104 aa21.3■■□□□ 1
IRF3-210ENST00000595240 YBX3P16989 372 aaKnown RBP eCLIP21.3■■□□□ 1
IRF3-210ENST00000595240 PELP1Q8IZL8 1130 aaKnown RBP21.3■■□□□ 1
IRF3-210ENST00000595240 ZBTB1Q9Y2K1 713 aa21.3■■□□□ 1
IRF3-210ENST00000595240 STARD3NLO95772 234 aa21.29■■□□□ 1
IRF3-210ENST00000595240 FMNL2Q96PY5 1086 aa21.29■■□□□ 1
IRF3-210ENST00000595240 MYBBP1AQ9BQG0 1328 aaKnown RBP21.29■■□□□ 1
IRF3-210ENST00000595240 KCNQ3O43525 872 aa21.28■■□□□ 1
IRF3-210ENST00000595240 NEFMP07197 916 aa21.28■■□□□ 1
IRF3-210ENST00000595240 DCTN1Q14203 1278 aa21.28■■□□□ 1
IRF3-210ENST00000595240 FKBP8Q14318 412 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms