RNA–Protein interactions for RNA: ENST00000594087.1

CCDC61-202, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC61, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-202ENST00000594087 DDX10Q13206 875 aaKnown RBP23.7■■□□□ 1.38
CCDC61-202ENST00000594087 RALBP1Q15311 655 aa23.7■■□□□ 1.38
CCDC61-202ENST00000594087 TAF1LQ8IZX4 1826 aa23.7■■□□□ 1.38
CCDC61-202ENST00000594087 U2AF1L5P0DN76 240 aaPredicted RBP23.69■■□□□ 1.38
CCDC61-202ENST00000594087 U2AF1Q01081 240 aaKnown RBP eCLIP23.69■■□□□ 1.38
CCDC61-202ENST00000594087 SCN11AQ9UI33 1791 aa23.68■■□□□ 1.38
CCDC61-202ENST00000594087 C4BP0C0L5 1744 aa23.68■■□□□ 1.38
CCDC61-202ENST00000594087 RNMTO43148 476 aaKnown RBP23.68■■□□□ 1.38
CCDC61-202ENST00000594087 FCHSD2O94868 740 aa23.68■■□□□ 1.38
CCDC61-202ENST00000594087 SGIP1Q9BQI5 828 aa23.68■■□□□ 1.38
CCDC61-202ENST00000594087 SLC52A2Q9HAB3 445 aa23.68■■□□□ 1.38
CCDC61-202ENST00000594087 ZNF831Q5JPB2 1677 aa23.67■■□□□ 1.38
CCDC61-202ENST00000594087 MSH5O43196 834 aa23.67■■□□□ 1.38
CCDC61-202ENST00000594087 POLD1P28340 1107 aa23.67■■□□□ 1.38
CCDC61-202ENST00000594087 RBM42Q9BTD8 480 aaKnown RBP23.67■■□□□ 1.38
CCDC61-202ENST00000594087 RSPH6AQ9H0K4 717 aa23.67■■□□□ 1.38
CCDC61-202ENST00000594087 PRKAR2BP31323 418 aa23.66■■□□□ 1.38
CCDC61-202ENST00000594087 COL23A1Q86Y22 540 aaPredicted RBP23.66■■□□□ 1.38
CCDC61-202ENST00000594087 LGR6Q9HBX8 967 aa23.66■■□□□ 1.38
CCDC61-202ENST00000594087 TUBGCP6Q96RT7 1819 aa23.66■■□□□ 1.38
CCDC61-202ENST00000594087 GNAT3A8MTJ3 354 aa23.65■■□□□ 1.38
CCDC61-202ENST00000594087 LINC00116Q8NCU8 138 aa23.65■■□□□ 1.38
CCDC61-202ENST00000594087 MAP3K5Q99683 1374 aa23.65■■□□□ 1.38
CCDC61-202ENST00000594087 MRC1P22897 1456 aa23.64■■□□□ 1.38
CCDC61-202ENST00000594087 SSFA2P28290 1259 aa23.64■■□□□ 1.37
CCDC61-202ENST00000594087 ITPK1Q13572 414 aa23.64■■□□□ 1.37
CCDC61-202ENST00000594087 ARXQ96QS3 562 aa23.64■■□□□ 1.37
CCDC61-202ENST00000594087 ADAMTS7Q9UKP4 1686 aa23.63■■□□□ 1.37
CCDC61-202ENST00000594087 NEFMP07197 916 aa23.62■■□□□ 1.37
CCDC61-202ENST00000594087 RC3H1Q5TC82 1133 aaKnown RBP23.62■■□□□ 1.37
CCDC61-202ENST00000594087 DCAF8L1A6NGE4 600 aa23.61■■□□□ 1.37
CCDC61-202ENST00000594087 PTCD1O75127 700 aaKnown RBP23.61■■□□□ 1.37
CCDC61-202ENST00000594087 PNNQ9H307 717 aaKnown RBP23.61■■□□□ 1.37
CCDC61-202ENST00000594087 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.6■■□□□ 1.37
CCDC61-202ENST00000594087 GNPATO15228 680 aa23.6■■□□□ 1.37
CCDC61-202ENST00000594087 SLC4A9Q96Q91 983 aa23.6■■□□□ 1.37
CCDC61-202ENST00000594087 CNTNAP4Q9C0A0 1308 aa23.59■■□□□ 1.37
CCDC61-202ENST00000594087 COL24A1Q17RW2 1714 aa23.59■■□□□ 1.37
CCDC61-202ENST00000594087 TEFQ10587 303 aa23.59■■□□□ 1.37
CCDC61-202ENST00000594087 PHACTR3Q96KR7 559 aa23.59■■□□□ 1.37
CCDC61-202ENST00000594087 RTCBQ9Y3I0 505 aaKnown RBP23.58■■□□□ 1.37
CCDC61-202ENST00000594087 UBR3Q6ZT12 1888 aa23.58■■□□□ 1.36
CCDC61-202ENST00000594087 PHF14O94880 888 aa23.57■■□□□ 1.36
CCDC61-202ENST00000594087 ADRA2BP18089 450 aa23.57■■□□□ 1.36
CCDC61-202ENST00000594087 IL17REQ8NFR9 667 aa23.57■■□□□ 1.36
CCDC61-202ENST00000594087 RTF1Q92541 710 aaKnown RBP23.57■■□□□ 1.36
CCDC61-202ENST00000594087 FHDC1Q9C0D6 1143 aaPredicted RBP23.57■■□□□ 1.36
CCDC61-202ENST00000594087 MYBBP1AQ9BQG0 1328 aaKnown RBP23.57■■□□□ 1.36
CCDC61-202ENST00000594087 SYT17Q9BSW7 474 aa23.56■■□□□ 1.36
CCDC61-202ENST00000594087 VIRMAQ69YN4 1812 aaKnown RBP23.56■■□□□ 1.36
CCDC61-202ENST00000594087 CICQ96RK0 1608 aaPredicted RBP23.55■■□□□ 1.36
CCDC61-202ENST00000594087 HTATSF1O43719 755 aaKnown RBP23.55■■□□□ 1.36
CCDC61-202ENST00000594087 TRAPPC3LQ5T215 181 aa23.55■■□□□ 1.36
CCDC61-202ENST00000594087 TTC5Q8N0Z6 440 aa23.55■■□□□ 1.36
CCDC61-202ENST00000594087 VSIG10Q8N0Z9 540 aa23.55■■□□□ 1.36
CCDC61-202ENST00000594087 CEMIPQ8WUJ3 1361 aa23.54■■□□□ 1.36
CCDC61-202ENST00000594087 COL5A3P25940 1745 aaPredicted RBP23.54■■□□□ 1.36
CCDC61-202ENST00000594087 RPS6KA4O75676 772 aa23.54■■□□□ 1.36
CCDC61-202ENST00000594087 SLC39A6Q13433 755 aa23.53■■□□□ 1.36
CCDC61-202ENST00000594087 AMIGO3Q86WK7 504 aa23.53■■□□□ 1.36
CCDC61-202ENST00000594087 CRKLP46109 303 aaKnown RBP23.51■■□□□ 1.35
CCDC61-202ENST00000594087 MSL1Q68DK7 614 aa23.5■■□□□ 1.35
CCDC61-202ENST00000594087 ZNF790Q6PG37 636 aa23.5■■□□□ 1.35
CCDC61-202ENST00000594087 KCPQ6ZWJ8 1503 aa23.49■■□□□ 1.35
CCDC61-202ENST00000594087 RFC4P35249 363 aa23.49■■□□□ 1.35
CCDC61-202ENST00000594087 PLEKHF1Q96S99 279 aa23.49■■□□□ 1.35
CCDC61-202ENST00000594087 MAPK8IP3Q9UPT6 1336 aa23.49■■□□□ 1.35
CCDC61-202ENST00000594087 TJP1Q07157 1748 aa23.48■■□□□ 1.35
CCDC61-202ENST00000594087 DNAJC10Q8IXB1 793 aa23.48■■□□□ 1.35
CCDC61-202ENST00000594087 TEX13AQ9BXU3 409 aaPredicted RBP23.48■■□□□ 1.35
CCDC61-202ENST00000594087 BTBD11A6QL63 1104 aa23.47■■□□□ 1.35
CCDC61-202ENST00000594087 SMIM5Q71RC9 77 aa23.47■■□□□ 1.35
CCDC61-202ENST00000594087 NLGN1Q8N2Q7 840 aa23.47■■□□□ 1.35
CCDC61-202ENST00000594087 ARHGEF1Q92888 912 aaKnown RBP23.47■■□□□ 1.35
CCDC61-202ENST00000594087 PRKRIP1Q9H875 184 aaPredicted RBP23.47■■□□□ 1.35
CCDC61-202ENST00000594087 CCDC87Q9NVE4 849 aa23.47■■□□□ 1.35
CCDC61-202ENST00000594087 SIPA1L3O60292 1781 aaPredicted RBP23.46■■□□□ 1.35
CCDC61-202ENST00000594087 STARD3NLO95772 234 aa23.46■■□□□ 1.35
CCDC61-202ENST00000594087 CYP19A1P11511 503 aaPredicted RBP23.46■■□□□ 1.35
CCDC61-202ENST00000594087 UBR2Q8IWV8 1755 aa23.46■■□□□ 1.35
CCDC61-202ENST00000594087 KLHL34Q8N239 644 aa23.46■■□□□ 1.35
CCDC61-202ENST00000594087 MCM10Q7L590 875 aa23.45■■□□□ 1.34
CCDC61-202ENST00000594087 FMNL2Q96PY5 1086 aa23.45■■□□□ 1.34
CCDC61-202ENST00000594087 NFE2L2Q16236 605 aa23.44■■□□□ 1.34
CCDC61-202ENST00000594087 INTS5Q6P9B9 1019 aaKnown RBP23.44■■□□□ 1.34
CCDC61-202ENST00000594087 CD2APQ9Y5K6 639 aa23.44■■□□□ 1.34
CCDC61-202ENST00000594087 MYH14Q7Z406 1995 aaKnown RBP23.43■■□□□ 1.34
CCDC61-202ENST00000594087 HEG1Q9ULI3 1381 aa23.43■■□□□ 1.34
CCDC61-202ENST00000594087 ZNF316A6NFI3 1004 aaPredicted RBP23.43■■□□□ 1.34
CCDC61-202ENST00000594087 ZNF496Q96IT1 587 aaPredicted RBP23.43■■□□□ 1.34
CCDC61-202ENST00000594087 WDR43Q15061 677 aaKnown RBP eCLIP23.41■■□□□ 1.34
CCDC61-202ENST00000594087 TAF7Q15545 349 aaPredicted RBP23.41■■□□□ 1.34
CCDC61-202ENST00000594087 PNISRQ8TF01 805 aaKnown RBP23.41■■□□□ 1.34
CCDC61-202ENST00000594087 SOS1Q07889 1333 aaPredicted RBP23.4■■□□□ 1.34
CCDC61-202ENST00000594087 GYS1P13807 737 aa23.4■■□□□ 1.34
CCDC61-202ENST00000594087 USP42Q9H9J4 1324 aaKnown RBP23.39■■□□□ 1.34
CCDC61-202ENST00000594087 MMP10P09238 476 aa23.39■■□□□ 1.33
CCDC61-202ENST00000594087 DCTN1Q14203 1278 aa23.39■■□□□ 1.33
CCDC61-202ENST00000594087 ZPR1O75312 459 aa23.38■■□□□ 1.33
CCDC61-202ENST00000594087 ZBTB1Q9Y2K1 713 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms