RNA–Protein interactions for RNA: ENST00000592483.5

CAPNS1-214, Transcript of calpain small subunit 1, humanhuman

TSL 5

Gene CAPNS1, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-214ENST00000592483 GGNBP2Q9H3C7 697 aa31.93■■■□□ 2.7
CAPNS1-214ENST00000592483 FSTL1Q12841 308 aa31.92■■■□□ 2.7
CAPNS1-214ENST00000592483 C16orf71Q8IYS4 520 aaPredicted RBP31.92■■■□□ 2.7
CAPNS1-214ENST00000592483 USHBP1Q8N6Y0 703 aa31.92■■■□□ 2.7
CAPNS1-214ENST00000592483 BCS1LQ9Y276 419 aa31.92■■■□□ 2.7
CAPNS1-214ENST00000592483 PXDNLA1KZ92 1463 aa31.91■■■□□ 2.7
CAPNS1-214ENST00000592483 PCNTO95613 3336 aa31.91■■■□□ 2.7
CAPNS1-214ENST00000592483 ARHGAP27Q6ZUM4 889 aa31.91■■■□□ 2.7
CAPNS1-214ENST00000592483 DIEXFQ68CQ4 756 aaKnown RBP31.9■■■□□ 2.7
CAPNS1-214ENST00000592483 RTL1A6NKG5 1358 aa31.9■■■□□ 2.7
CAPNS1-214ENST00000592483 CC2D1BQ5T0F9 858 aaKnown RBP31.89■■■□□ 2.7
CAPNS1-214ENST00000592483 MORC1Q86VD1 984 aa31.89■■■□□ 2.7
CAPNS1-214ENST00000592483 MMP10P09238 476 aa31.88■■■□□ 2.69
CAPNS1-214ENST00000592483 RALBP1Q15311 655 aa31.88■■■□□ 2.69
CAPNS1-214ENST00000592483 KIF13BQ9NQT8 1826 aa31.87■■■□□ 2.69
CAPNS1-214ENST00000592483 A0A0G2JLW4 131 aa31.86■■■□□ 2.69
CAPNS1-214ENST00000592483 CYP27B1O15528 508 aa31.86■■■□□ 2.69
CAPNS1-214ENST00000592483 PIGBQ92521 554 aa31.86■■■□□ 2.69
CAPNS1-214ENST00000592483 ANP32CO43423 234 aa31.85■■■□□ 2.69
CAPNS1-214ENST00000592483 LINC00116Q8NCU8 138 aa31.85■■■□□ 2.69
CAPNS1-214ENST00000592483 SMG6Q86US8 1419 aaKnown RBP31.84■■■□□ 2.69
CAPNS1-214ENST00000592483 ITGB4P16144 1822 aa31.84■■■□□ 2.69
CAPNS1-214ENST00000592483 KIAA1551Q9HCM1 1747 aa31.84■■■□□ 2.69
CAPNS1-214ENST00000592483 LOC102724428A0A0B4J2F2 783 aa31.84■■■□□ 2.69
CAPNS1-214ENST00000592483 SIK1P57059 783 aa31.84■■■□□ 2.69
CAPNS1-214ENST00000592483 N4BP2Q86UW6 1770 aaPredicted RBP31.83■■■□□ 2.69
CAPNS1-214ENST00000592483 GNPATO15228 680 aa31.82■■■□□ 2.68
CAPNS1-214ENST00000592483 RRS1Q15050 365 aaKnown RBP31.82■■■□□ 2.68
CAPNS1-214ENST00000592483 PRKRIP1Q9H875 184 aaPredicted RBP31.82■■■□□ 2.68
CAPNS1-214ENST00000592483 PLEKHG2Q9H7P9 1386 aa31.81■■■□□ 2.68
CAPNS1-214ENST00000592483 C9orf131Q5VYM1 1079 aa31.81■■■□□ 2.68
CAPNS1-214ENST00000592483 MAP2P11137 1827 aaKnown RBP31.81■■■□□ 2.68
CAPNS1-214ENST00000592483 FCHSD2O94868 740 aa31.8■■■□□ 2.68
CAPNS1-214ENST00000592483 KDM2BQ8NHM5 1336 aa31.78■■■□□ 2.68
CAPNS1-214ENST00000592483 NLGN1Q8N2Q7 840 aa31.78■■■□□ 2.68
CAPNS1-214ENST00000592483 C10orf71Q711Q0 1435 aa31.77■■■□□ 2.68
CAPNS1-214ENST00000592483 DPEP1P16444 411 aa31.77■■■□□ 2.68
CAPNS1-214ENST00000592483 NKX1-1Q15270 411 aaPredicted RBP31.77■■■□□ 2.68
CAPNS1-214ENST00000592483 ITPK1Q13572 414 aa31.75■■■□□ 2.67
CAPNS1-214ENST00000592483 INSRP06213 1382 aa31.74■■■□□ 2.67
CAPNS1-214ENST00000592483 KIF24Q5T7B8 1368 aa31.74■■■□□ 2.67
CAPNS1-214ENST00000592483 MYBBP1AQ9BQG0 1328 aaKnown RBP31.74■■■□□ 2.67
CAPNS1-214ENST00000592483 ATP6V1AP38606 617 aa31.73■■■□□ 2.67
CAPNS1-214ENST00000592483 CNGB1Q14028 1251 aaPredicted RBP31.73■■■□□ 2.67
CAPNS1-214ENST00000592483 HSP90AB2PQ58FF8 381 aa31.73■■■□□ 2.67
CAPNS1-214ENST00000592483 CCDC87Q9NVE4 849 aa31.73■■■□□ 2.67
CAPNS1-214ENST00000592483 KCPQ6ZWJ8 1503 aa31.72■■■□□ 2.67
CAPNS1-214ENST00000592483 TRAPPC3LQ5T215 181 aa31.72■■■□□ 2.67
CAPNS1-214ENST00000592483 RRAGCQ9HB90 399 aa31.72■■■□□ 2.67
CAPNS1-214ENST00000592483 SMC1BQ8NDV3 1235 aa31.71■■■□□ 2.67
CAPNS1-214ENST00000592483 BRCA1P38398 1863 aaKnown RBP31.7■■■□□ 2.67
CAPNS1-214ENST00000592483 TMOD3Q9NYL9 352 aa31.7■■■□□ 2.67
CAPNS1-214ENST00000592483 ASAP1Q9ULH1 1129 aa31.7■■■□□ 2.67
CAPNS1-214ENST00000592483 KCNA3P22001 575 aa31.69■■■□□ 2.66
CAPNS1-214ENST00000592483 PPP2R1AP30153 589 aa31.69■■■□□ 2.66
CAPNS1-214ENST00000592483 TNNT2P45379 298 aaPredicted RBP31.68■■■□□ 2.66
CAPNS1-214ENST00000592483 RTCBQ9Y3I0 505 aaKnown RBP31.68■■■□□ 2.66
CAPNS1-214ENST00000592483 PKD1L3Q7Z443 1732 aa31.68■■■□□ 2.66
CAPNS1-214ENST00000592483 ARFGEF1Q9Y6D6 1849 aa31.68■■■□□ 2.66
CAPNS1-214ENST00000592483 PIM2Q9P1W9 311 aa31.67■■■□□ 2.66
CAPNS1-214ENST00000592483 HSPA1AP0DMV8 641 aaKnown RBP31.66■■■□□ 2.66
CAPNS1-214ENST00000592483 HSPA1BP0DMV9 641 aaKnown RBP31.66■■■□□ 2.66
CAPNS1-214ENST00000592483 RNF181Q9P0P0 153 aa31.66■■■□□ 2.66
CAPNS1-214ENST00000592483 SPG7Q9UQ90 795 aa31.66■■■□□ 2.66
CAPNS1-214ENST00000592483 PARP3Q9Y6F1 533 aa31.66■■■□□ 2.66
CAPNS1-214ENST00000592483 FLT4P35916 1363 aa31.66■■■□□ 2.66
CAPNS1-214ENST00000592483 DCAF5Q96JK2 942 aa31.65■■■□□ 2.66
CAPNS1-214ENST00000592483 POLKQ9UBT6 870 aa31.65■■■□□ 2.66
CAPNS1-214ENST00000592483 C4AP0C0L4 1744 aa31.64■■■□□ 2.66
CAPNS1-214ENST00000592483 ADRA2BP18089 450 aa31.64■■■□□ 2.66
CAPNS1-214ENST00000592483 TNRC6CQ9HCJ0 1690 aaKnown RBP31.64■■■□□ 2.65
CAPNS1-214ENST00000592483 ARHGEF1Q92888 912 aaKnown RBP31.63■■■□□ 2.65
CAPNS1-214ENST00000592483 GYS1P13807 737 aa31.62■■■□□ 2.65
CAPNS1-214ENST00000592483 DALRD3Q5D0E6 543 aaKnown RBP31.62■■■□□ 2.65
CAPNS1-214ENST00000592483 ATG3Q9NT62 314 aa31.62■■■□□ 2.65
CAPNS1-214ENST00000592483 MTHFSP49914 203 aa31.59■■■□□ 2.65
CAPNS1-214ENST00000592483 RC3H1Q5TC82 1133 aaKnown RBP31.59■■■□□ 2.65
CAPNS1-214ENST00000592483 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.59■■■□□ 2.65
CAPNS1-214ENST00000592483 EMILIN1Q9Y6C2 1016 aa31.59■■■□□ 2.65
CAPNS1-214ENST00000592483 RFC4P35249 363 aa31.58■■■□□ 2.65
CAPNS1-214ENST00000592483 CFAP53Q96M91 514 aa31.58■■■□□ 2.65
CAPNS1-214ENST00000592483 NCAPD2Q15021 1401 aa31.57■■■□□ 2.64
CAPNS1-214ENST00000592483 KDRP35968 1356 aa31.55■■■□□ 2.64
CAPNS1-214ENST00000592483 SBF1O95248 1867 aa31.55■■■□□ 2.64
CAPNS1-214ENST00000592483 ZC3H4Q9UPT8 1303 aaKnown RBP31.54■■■□□ 2.64
CAPNS1-214ENST00000592483 RPS6KA4O75676 772 aa31.54■■■□□ 2.64
CAPNS1-214ENST00000592483 IFNL2Q8IZJ0 200 aa31.54■■■□□ 2.64
CAPNS1-214ENST00000592483 CCER2I3L3R5 266 aa31.53■■■□□ 2.64
CAPNS1-214ENST00000592483 PPM1GO15355 546 aaPredicted RBP31.53■■■□□ 2.64
CAPNS1-214ENST00000592483 VEGFAP15692 232 aaPredicted RBP31.52■■■□□ 2.64
CAPNS1-214ENST00000592483 PHKG2P15735 406 aa31.52■■■□□ 2.64
CAPNS1-214ENST00000592483 SLC4A9Q96Q91 983 aa31.52■■■□□ 2.64
CAPNS1-214ENST00000592483 CNTNAP4Q9C0A0 1308 aa31.51■■■□□ 2.64
CAPNS1-214ENST00000592483 ZNF831Q5JPB2 1677 aa31.51■■■□□ 2.63
CAPNS1-214ENST00000592483 SLC34A2O95436 690 aa31.5■■■□□ 2.63
CAPNS1-214ENST00000592483 COL3A1P02461 1466 aaPredicted RBP31.49■■■□□ 2.63
CAPNS1-214ENST00000592483 RBM42Q9BTD8 480 aaKnown RBP31.49■■■□□ 2.63
CAPNS1-214ENST00000592483 MIER1Q8N108 512 aa31.48■■■□□ 2.63
CAPNS1-214ENST00000592483 GLTPD2A6NH11 291 aa31.47■■■□□ 2.63
CAPNS1-214ENST00000592483 CHRNA5P30532 468 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms