RNA–Protein interactions for RNA: ENST00000592133.5

RANBP3-225, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-225ENST00000592133 N4BP2Q86UW6 1770 aaPredicted RBP17.13■□□□□ 0.33
RANBP3-225ENST00000592133 TRAPPC3LQ5T215 181 aa17.13■□□□□ 0.33
RANBP3-225ENST00000592133 ITPK1Q13572 414 aa17.12■□□□□ 0.33
RANBP3-225ENST00000592133 CARD11Q9BXL7 1154 aa17.12■□□□□ 0.33
RANBP3-225ENST00000592133 PIM2Q9P1W9 311 aa17.12■□□□□ 0.33
RANBP3-225ENST00000592133 RTCBQ9Y3I0 505 aaKnown RBP17.12■□□□□ 0.33
RANBP3-225ENST00000592133 PARP3Q9Y6F1 533 aa17.12■□□□□ 0.33
RANBP3-225ENST00000592133 C10orf71Q711Q0 1435 aa17.12■□□□□ 0.33
RANBP3-225ENST00000592133 TMOD3Q9NYL9 352 aa17.11■□□□□ 0.33
RANBP3-225ENST00000592133 NEUROD1Q13562 356 aa17.1■□□□□ 0.33
RANBP3-225ENST00000592133 ASAP1Q9ULH1 1129 aa17.1■□□□□ 0.33
RANBP3-225ENST00000592133 KCNA3P22001 575 aa17.09■□□□□ 0.33
RANBP3-225ENST00000592133 HSP90AB2PQ58FF8 381 aa17.09■□□□□ 0.33
RANBP3-225ENST00000592133 DALRD3Q5D0E6 543 aaKnown RBP17.09■□□□□ 0.33
RANBP3-225ENST00000592133 PUS7Q96PZ0 661 aaKnown RBP17.09■□□□□ 0.33
RANBP3-225ENST00000592133 SIN3AQ96ST3 1273 aa17.09■□□□□ 0.33
RANBP3-225ENST00000592133 KIF13BQ9NQT8 1826 aa17.08■□□□□ 0.33
RANBP3-225ENST00000592133 KIAA1551Q9HCM1 1747 aa17.08■□□□□ 0.32
RANBP3-225ENST00000592133 SLC34A2O95436 690 aa17.08■□□□□ 0.32
RANBP3-225ENST00000592133 NKX1-1Q15270 411 aaPredicted RBP17.08■□□□□ 0.32
RANBP3-225ENST00000592133 DCAF5Q96JK2 942 aa17.08■□□□□ 0.32
RANBP3-225ENST00000592133 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
RANBP3-225ENST00000592133 RFC4P35249 363 aa17.07■□□□□ 0.32
RANBP3-225ENST00000592133 ARHGEF1Q92888 912 aaKnown RBP17.07■□□□□ 0.32
RANBP3-225ENST00000592133 GGNBP2Q9H3C7 697 aa17.07■□□□□ 0.32
RANBP3-225ENST00000592133 ITGB4P16144 1822 aa17.07■□□□□ 0.32
RANBP3-225ENST00000592133 INSRP06213 1382 aa17.06■□□□□ 0.32
RANBP3-225ENST00000592133 GYS1P13807 737 aa17.06■□□□□ 0.32
RANBP3-225ENST00000592133 VEGFAP15692 232 aaPredicted RBP17.05■□□□□ 0.32
RANBP3-225ENST00000592133 ADRA2BP18089 450 aa17.05■□□□□ 0.32
RANBP3-225ENST00000592133 ATG3Q9NT62 314 aa17.04■□□□□ 0.32
RANBP3-225ENST00000592133 MAP2P11137 1827 aaKnown RBP17.04■□□□□ 0.32
RANBP3-225ENST00000592133 FYB1O15117 783 aa17.03■□□□□ 0.32
RANBP3-225ENST00000592133 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
RANBP3-225ENST00000592133 PKD1L3Q7Z443 1732 aa17.03■□□□□ 0.32
RANBP3-225ENST00000592133 TNRC6CQ9HCJ0 1690 aaKnown RBP17.03■□□□□ 0.32
RANBP3-225ENST00000592133 FLT4P35916 1363 aa17.02■□□□□ 0.32
RANBP3-225ENST00000592133 C4AP0C0L4 1744 aa17.02■□□□□ 0.32
RANBP3-225ENST00000592133 RC3H1Q5TC82 1133 aaKnown RBP17.02■□□□□ 0.32
RANBP3-225ENST00000592133 RPS6KA4O75676 772 aa17.01■□□□□ 0.31
RANBP3-225ENST00000592133 CHRNA5P30532 468 aa17.01■□□□□ 0.31
RANBP3-225ENST00000592133 GLTPD2A6NH11 291 aa17■□□□□ 0.31
RANBP3-225ENST00000592133 IFNL2Q8IZJ0 200 aa17■□□□□ 0.31
RANBP3-225ENST00000592133 ARFGEF1Q9Y6D6 1849 aa17■□□□□ 0.31
RANBP3-225ENST00000592133 ZC3H4Q9UPT8 1303 aaKnown RBP16.99■□□□□ 0.31
RANBP3-225ENST00000592133 RASSF7Q02833 373 aa16.99■□□□□ 0.31
RANBP3-225ENST00000592133 BRCA1P38398 1863 aaKnown RBP16.99■□□□□ 0.31
RANBP3-225ENST00000592133 PCNTO95613 3336 aa16.98■□□□□ 0.31
RANBP3-225ENST00000592133 PPM1GO15355 546 aaPredicted RBP16.98■□□□□ 0.31
RANBP3-225ENST00000592133 PHKG2P15735 406 aa16.98■□□□□ 0.31
RANBP3-225ENST00000592133 SLC4A9Q96Q91 983 aa16.98■□□□□ 0.31
RANBP3-225ENST00000592133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.98■□□□□ 0.312e-6■□□□□ 10
RANBP3-225ENST00000592133 MKRN1Q9UHC7 482 aaKnown RBP16.98■□□□□ 0.31
RANBP3-225ENST00000592133 KIF24Q5T7B8 1368 aa16.98■□□□□ 0.31
RANBP3-225ENST00000592133 CNTNAP4Q9C0A0 1308 aa16.97■□□□□ 0.31
RANBP3-225ENST00000592133 LMNB1P20700 586 aa16.97■□□□□ 0.31
RANBP3-225ENST00000592133 FKBP8Q14318 412 aa16.96■□□□□ 0.31
RANBP3-225ENST00000592133 SRP68Q9UHB9 627 aaKnown RBP16.96■□□□□ 0.31
RANBP3-225ENST00000592133 EMILIN1Q9Y6C2 1016 aa16.96■□□□□ 0.31
RANBP3-225ENST00000592133 KDRP35968 1356 aa16.96■□□□□ 0.31
RANBP3-225ENST00000592133 FOXN1O15353 648 aa16.95■□□□□ 0.3
RANBP3-225ENST00000592133 DDR1Q08345 913 aa16.95■□□□□ 0.3
RANBP3-225ENST00000592133 SLC24A1O60721 1099 aa16.94■□□□□ 0.3
RANBP3-225ENST00000592133 DPY19L2Q6NUT2 758 aa16.94■□□□□ 0.3
RANBP3-225ENST00000592133 AIDAQ96BJ3 306 aa16.94■□□□□ 0.3
RANBP3-225ENST00000592133 EYA1Q99502 592 aa16.94■□□□□ 0.3
RANBP3-225ENST00000592133 PRDM10Q9NQV6 1147 aa16.94■□□□□ 0.3
RANBP3-225ENST00000592133 CREBZFQ9NS37 354 aa16.94■□□□□ 0.3
RANBP3-225ENST00000592133 ST20-MTHFSA0A0A6YYL1 179 aa16.93■□□□□ 0.3
RANBP3-225ENST00000592133 TESK2Q96S53 571 aa16.93■□□□□ 0.3
RANBP3-225ENST00000592133 TONSLQ96HA7 1378 aa16.92■□□□□ 0.3
RANBP3-225ENST00000592133 ERVV-2B6SEH9 535 aa16.92■□□□□ 0.3
RANBP3-225ENST00000592133 SBF1O95248 1867 aa16.92■□□□□ 0.3
RANBP3-225ENST00000592133 USP42Q9H9J4 1324 aaKnown RBP16.92■□□□□ 0.3
RANBP3-225ENST00000592133 KDM6AO15550 1401 aaPredicted RBP16.91■□□□□ 0.3
RANBP3-225ENST00000592133 NCAPD2Q15021 1401 aa16.91■□□□□ 0.3
RANBP3-225ENST00000592133 POLRMTO00411 1230 aaKnown RBP16.91■□□□□ 0.3
RANBP3-225ENST00000592133 CRKLP46109 303 aaKnown RBP16.91■□□□□ 0.3
RANBP3-225ENST00000592133 CTCFP49711 727 aaPredicted RBP16.91■□□□□ 0.3
RANBP3-225ENST00000592133 POTECB2RU33 542 aa16.9■□□□□ 0.3
RANBP3-225ENST00000592133 PTCD1O75127 700 aaKnown RBP16.9■□□□□ 0.3
RANBP3-225ENST00000592133 CABP4P57796 275 aa16.9■□□□□ 0.3
RANBP3-225ENST00000592133 FAM161AQ3B820 660 aa16.9■□□□□ 0.3
RANBP3-225ENST00000592133 CHADLQ6NUI6 762 aa16.9■□□□□ 0.3
RANBP3-225ENST00000592133 PCDH10Q9P2E7 1040 aa16.9■□□□□ 0.3
RANBP3-225ENST00000592133 TM4SF1P30408 202 aa16.89■□□□□ 0.29
RANBP3-225ENST00000592133 TTLL6Q8N841 843 aa16.89■□□□□ 0.29
RANBP3-225ENST00000592133 ZPR1O75312 459 aa16.88■□□□□ 0.29
RANBP3-225ENST00000592133 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
RANBP3-225ENST00000592133 WASHC2AQ641Q2 1341 aa16.88■□□□□ 0.29
RANBP3-225ENST00000592133 ZNF831Q5JPB2 1677 aa16.86■□□□□ 0.29
RANBP3-225ENST00000592133 LBX1P52954 281 aa16.86■□□□□ 0.29
RANBP3-225ENST00000592133 USPL1Q5W0Q7 1092 aa16.86■□□□□ 0.29
RANBP3-225ENST00000592133 CNTNAP1P78357 1384 aa16.86■□□□□ 0.29
RANBP3-225ENST00000592133 COL5A3P25940 1745 aaPredicted RBP16.85■□□□□ 0.29
RANBP3-225ENST00000592133 NFKBIEO00221 500 aa16.85■□□□□ 0.29
RANBP3-225ENST00000592133 ERFEQ4G0M1 354 aa16.85■□□□□ 0.29
RANBP3-225ENST00000592133 ABHD8Q96I13 439 aa16.85■□□□□ 0.29
RANBP3-225ENST00000592133 C2CD5Q86YS7 1000 aa16.84■□□□□ 0.29
RANBP3-225ENST00000592133 H0YIN7 160 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms