RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 HLA-DOAP06340 250 aa7.62□□□□□ -1.19
SMAD4-212ENST00000591126 PLCG2P16885 1265 aa7.62□□□□□ -1.19
SMAD4-212ENST00000591126 TPM4P67936 248 aa7.62□□□□□ -1.19
SMAD4-212ENST00000591126 OTUD7BQ6GQQ9 843 aa7.62□□□□□ -1.19
SMAD4-212ENST00000591126 CARD10Q9BWT7 1032 aa7.62□□□□□ -1.19
SMAD4-212ENST00000591126 TAOK2Q9UL54 1235 aa7.62□□□□□ -1.19
SMAD4-212ENST00000591126 C6orf229H3BNL8 230 aa7.61□□□□□ -1.19
SMAD4-212ENST00000591126 PTCD1O75127 700 aaKnown RBP7.61□□□□□ -1.19
SMAD4-212ENST00000591126 RRS1Q15050 365 aaKnown RBP7.61□□□□□ -1.19
SMAD4-212ENST00000591126 SAFBQ15424 915 aaKnown RBP eCLIP7.61□□□□□ -1.19
SMAD4-212ENST00000591126 ZSCAN29Q8IWY8 852 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-212ENST00000591126 CTNNA3Q9UI47 895 aa7.61□□□□□ -1.19
SMAD4-212ENST00000591126 RTL1A6NKG5 1358 aa7.61□□□□□ -1.19
SMAD4-212ENST00000591126 TTC37Q6PGP7 1564 aa7.61□□□□□ -1.19
SMAD4-212ENST00000591126 FAM98CQ17RN3 349 aaKnown RBP7.61□□□□□ -1.19
SMAD4-212ENST00000591126 ZNF804AQ7Z570 1209 aa7.61□□□□□ -1.19
SMAD4-212ENST00000591126 UTP14AQ9BVJ6 771 aaKnown RBP7.61□□□□□ -1.19
SMAD4-212ENST00000591126 CABP5Q9NP86 173 aa7.61□□□□□ -1.19
SMAD4-212ENST00000591126 RBM27Q9P2N5 1060 aaKnown RBP7.61□□□□□ -1.19
SMAD4-212ENST00000591126 COL17A1Q9UMD9 1497 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-212ENST00000591126 FAM177BA6PVY3 158 aa7.61□□□□□ -1.19
SMAD4-212ENST00000591126 TRIM21P19474 475 aaKnown RBP7.61□□□□□ -1.19
SMAD4-212ENST00000591126 ZNF335Q9H4Z2 1342 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-212ENST00000591126 SLC27A3Q5K4L6 730 aa7.61□□□□□ -1.19
SMAD4-212ENST00000591126 AIDAQ96BJ3 306 aa7.61□□□□□ -1.19
SMAD4-212ENST00000591126 CWC25Q9NXE8 425 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-212ENST00000591126 RAD21O60216 631 aa7.6□□□□□ -1.19
SMAD4-212ENST00000591126 TTF1Q15361 905 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-212ENST00000591126 RALGAPBQ86X10 1494 aa7.6□□□□□ -1.19
SMAD4-212ENST00000591126 TCIRG1Q13488 830 aa7.6□□□□□ -1.19
SMAD4-212ENST00000591126 CNTROBQ8N137 903 aa7.6□□□□□ -1.19
SMAD4-212ENST00000591126 ATP6V1DQ9Y5K8 247 aa7.6□□□□□ -1.19
SMAD4-212ENST00000591126 PLA2R1Q13018 1463 aa7.6□□□□□ -1.19
SMAD4-212ENST00000591126 ADCY10Q96PN6 1610 aa7.6□□□□□ -1.19
SMAD4-212ENST00000591126 UQCRFS1P1P0C7P4 283 aa7.6□□□□□ -1.19
SMAD4-212ENST00000591126 PSMA5P28066 241 aa7.6□□□□□ -1.19
SMAD4-212ENST00000591126 ANKRD18AQ8IVF6 992 aa7.6□□□□□ -1.19
SMAD4-212ENST00000591126 CRACR2BQ8N4Y2 399 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-212ENST00000591126 LRRCC1Q9C099 1032 aa7.6□□□□□ -1.19
SMAD4-212ENST00000591126 ZC3H12CQ9C0D7 883 aaKnown RBP7.6□□□□□ -1.19
SMAD4-212ENST00000591126 IL16Q14005 1332 aa7.6□□□□□ -1.19
SMAD4-212ENST00000591126 ST18O60284 1047 aa7.6□□□□□ -1.19
SMAD4-212ENST00000591126 ELL2O00472 640 aaPredicted RBP7.59□□□□□ -1.19
SMAD4-212ENST00000591126 HOXB7P09629 217 aa7.59□□□□□ -1.19
SMAD4-212ENST00000591126 TNIP1Q15025 636 aa7.59□□□□□ -1.19
SMAD4-212ENST00000591126 SPON1Q9HCB6 807 aa7.59□□□□□ -1.19
SMAD4-212ENST00000591126 DIP2BQ9P265 1576 aa7.59□□□□□ -1.19
SMAD4-212ENST00000591126 CPLX1O14810 134 aa7.59□□□□□ -1.19
SMAD4-212ENST00000591126 KIF22Q14807 665 aa7.59□□□□□ -1.19
SMAD4-212ENST00000591126 CNBD1Q8NA66 436 aa7.59□□□□□ -1.19
SMAD4-212ENST00000591126 HOOK1Q9UJC3 728 aaKnown RBP7.59□□□□□ -1.19
SMAD4-212ENST00000591126 AFF2P51816 1311 aa7.59□□□□□ -1.19
SMAD4-212ENST00000591126 PLXNC1O60486 1568 aa7.59□□□□□ -1.19
SMAD4-212ENST00000591126 TPM2P07951 284 aa7.59□□□□□ -1.19
SMAD4-212ENST00000591126 LTKP29376 864 aa7.59□□□□□ -1.19
SMAD4-212ENST00000591126 SLC16A10Q8TF71 515 aa7.59□□□□□ -1.19
SMAD4-212ENST00000591126 ERBB4Q15303 1308 aa7.59□□□□□ -1.19
SMAD4-212ENST00000591126 SYNMO15061 1565 aa7.59□□□□□ -1.19
SMAD4-212ENST00000591126 PLIN1O60240 522 aa7.59□□□□□ -1.2
SMAD4-212ENST00000591126 RAB11FIP3O75154 756 aa7.59□□□□□ -1.2
SMAD4-212ENST00000591126 PHF14O94880 888 aa7.59□□□□□ -1.2
SMAD4-212ENST00000591126 CNKSR2Q8WXI2 1034 aa7.59□□□□□ -1.2
SMAD4-212ENST00000591126 ADGRL3Q9HAR2 1447 aa7.59□□□□□ -1.2
SMAD4-212ENST00000591126 MYL6BP14649 208 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 MVPQ14764 893 aaKnown RBP7.58□□□□□ -1.2
SMAD4-212ENST00000591126 DZIP1Q86YF9 867 aaKnown RBP7.58□□□□□ -1.2
SMAD4-212ENST00000591126 PTPRCP08575 1304 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 APBB1O00213 710 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 MPHOSPH10O00566 681 aaKnown RBP7.58□□□□□ -1.2
SMAD4-212ENST00000591126 GNPATO15228 680 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 ADRA2BP18089 450 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 ALDH1L2Q3SY69 923 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 METTL24Q5JXM2 366 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 NFXL1Q6ZNB6 911 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 SH2D4AQ9H788 454 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 MBD5Q9P267 1494 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 SLC4A2P04920 1241 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 PDIA4P13667 645 aaKnown RBP7.58□□□□□ -1.2
SMAD4-212ENST00000591126 PNMA2Q9UL42 364 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 OVOS2A0A0G2JMS6 1433 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 OVOS2A0A0J9YW53 1432 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 OVOS2Q6IE36 1432 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 MAP3K12Q12852 859 aa7.58□□□□□ -1.2
SMAD4-212ENST00000591126 ABCC3O15438 1527 aa7.57□□□□□ -1.2
SMAD4-212ENST00000591126 DCCP43146 1447 aa7.57□□□□□ -1.2
SMAD4-212ENST00000591126 H7C1D1 291 aa7.57□□□□□ -1.2
SMAD4-212ENST00000591126 HSP90AA2PQ14568 343 aaPredicted RBP7.57□□□□□ -1.2
SMAD4-212ENST00000591126 TNFAIP1Q13829 316 aa7.57□□□□□ -1.2
SMAD4-212ENST00000591126 NIM1KQ8IY84 436 aa7.57□□□□□ -1.2
SMAD4-212ENST00000591126 SEPT12Q8IYM1 358 aa7.57□□□□□ -1.2
SMAD4-212ENST00000591126 LRP2BPQ9P2M1 347 aa7.57□□□□□ -1.2
SMAD4-212ENST00000591126 DZIP3Q86Y13 1208 aaKnown RBP7.57□□□□□ -1.2
SMAD4-212ENST00000591126 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.57□□□□□ -1.2
SMAD4-212ENST00000591126 FAM184AQ8NB25 1140 aa7.57□□□□□ -1.2
SMAD4-212ENST00000591126 NECTIN2Q92692 538 aa7.57□□□□□ -1.2
SMAD4-212ENST00000591126 ORAI2Q96SN7 254 aa7.57□□□□□ -1.2
SMAD4-212ENST00000591126 RAI14Q9P0K7 980 aa7.57□□□□□ -1.2
SMAD4-212ENST00000591126 PRAG1Q86YV5 1406 aa7.56□□□□□ -1.2
SMAD4-212ENST00000591126 RPAP2Q8IXW5 612 aaPredicted RBP7.56□□□□□ -1.2
SMAD4-212ENST00000591126 GCC1Q96CN9 775 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms