RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 HMOX1P09601 288 aa28.76■■■□□ 2.19
R3HDM4-206ENST00000590454 HSPA6P17066 643 aa28.75■■■□□ 2.19
R3HDM4-206ENST00000590454 CCDC184Q52MB2 194 aa28.75■■■□□ 2.19
R3HDM4-206ENST00000590454 ADCY9O60503 1353 aa28.75■■■□□ 2.19
R3HDM4-206ENST00000590454 C5P01031 1676 aa28.74■■■□□ 2.19
R3HDM4-206ENST00000590454 SMARCC1Q92922 1105 aaPredicted RBP28.74■■■□□ 2.19
R3HDM4-206ENST00000590454 AK7Q96M32 723 aa28.74■■■□□ 2.19
R3HDM4-206ENST00000590454 ZNF526Q8TF50 670 aaPredicted RBP28.73■■■□□ 2.19
R3HDM4-206ENST00000590454 KDRP35968 1356 aa28.73■■■□□ 2.19
R3HDM4-206ENST00000590454 CYP27B1O15528 508 aa28.69■■■□□ 2.18
R3HDM4-206ENST00000590454 U2AF1L5P0DN76 240 aaPredicted RBP28.68■■■□□ 2.18
R3HDM4-206ENST00000590454 U2AF1Q01081 240 aaKnown RBP eCLIP28.68■■■□□ 2.18
R3HDM4-206ENST00000590454 DIEXFQ68CQ4 756 aaKnown RBP28.68■■■□□ 2.18
R3HDM4-206ENST00000590454 NUDCQ9Y266 331 aa28.68■■■□□ 2.18
R3HDM4-206ENST00000590454 CEP350Q5VT06 3117 aa28.67■■■□□ 2.18
R3HDM4-206ENST00000590454 PKD1L3Q7Z443 1732 aa28.67■■■□□ 2.18
R3HDM4-206ENST00000590454 PHF14O94880 888 aa28.67■■■□□ 2.18
R3HDM4-206ENST00000590454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.66■■■□□ 2.18
R3HDM4-206ENST00000590454 AMIGO3Q86WK7 504 aa28.66■■■□□ 2.18
R3HDM4-206ENST00000590454 C4BP0C0L5 1744 aa28.66■■■□□ 2.18
R3HDM4-206ENST00000590454 WWC3Q9ULE0 1092 aa28.65■■■□□ 2.18
R3HDM4-206ENST00000590454 TAF1LQ8IZX4 1826 aa28.64■■■□□ 2.18
R3HDM4-206ENST00000590454 SSFA2P28290 1259 aa28.64■■■□□ 2.18
R3HDM4-206ENST00000590454 PIGBQ92521 554 aa28.64■■■□□ 2.18
R3HDM4-206ENST00000590454 RSPH6AQ9H0K4 717 aa28.64■■■□□ 2.18
R3HDM4-206ENST00000590454 SMIM5Q71RC9 77 aa28.62■■■□□ 2.17
R3HDM4-206ENST00000590454 NKX1-1Q15270 411 aaPredicted RBP28.61■■■□□ 2.17
R3HDM4-206ENST00000590454 LOC102724428A0A0B4J2F2 783 aa28.6■■■□□ 2.17
R3HDM4-206ENST00000590454 PRKAR2BP31323 418 aa28.6■■■□□ 2.17
R3HDM4-206ENST00000590454 SIK1P57059 783 aa28.6■■■□□ 2.17
R3HDM4-206ENST00000590454 KIF3CO14782 793 aa28.59■■■□□ 2.17
R3HDM4-206ENST00000590454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.59■■■□□ 2.17
R3HDM4-206ENST00000590454 SPG7Q9UQ90 795 aa28.59■■■□□ 2.17
R3HDM4-206ENST00000590454 LINC00116Q8NCU8 138 aa28.58■■■□□ 2.17
R3HDM4-206ENST00000590454 PHACTR3Q96KR7 559 aa28.58■■■□□ 2.17
R3HDM4-206ENST00000590454 PLEKHO1Q53GL0 409 aaPredicted RBP28.57■■■□□ 2.16
R3HDM4-206ENST00000590454 MRS2Q9HD23 443 aa28.57■■■□□ 2.16
R3HDM4-206ENST00000590454 TOGARAM1Q9Y4F4 1720 aa28.57■■■□□ 2.16
R3HDM4-206ENST00000590454 FCHSD2O94868 740 aa28.56■■■□□ 2.16
R3HDM4-206ENST00000590454 UBR3Q6ZT12 1888 aa28.55■■■□□ 2.16
R3HDM4-206ENST00000590454 PLEKHG2Q9H7P9 1386 aa28.55■■■□□ 2.16
R3HDM4-206ENST00000590454 MTHFSDQ2M296 383 aaKnown RBP28.55■■■□□ 2.16
R3HDM4-206ENST00000590454 ZNF530Q6P9A1 599 aaPredicted RBP28.55■■■□□ 2.16
R3HDM4-206ENST00000590454 GNPATO15228 680 aa28.54■■■□□ 2.16
R3HDM4-206ENST00000590454 AMOTQ4VCS5 1084 aa28.54■■■□□ 2.16
R3HDM4-206ENST00000590454 TMOD3Q9NYL9 352 aa28.54■■■□□ 2.16
R3HDM4-206ENST00000590454 ADAMTS8Q9UP79 889 aa28.54■■■□□ 2.16
R3HDM4-206ENST00000590454 ITGB4P16144 1822 aa28.54■■■□□ 2.16
R3HDM4-206ENST00000590454 PHKG2P15735 406 aa28.53■■■□□ 2.16
R3HDM4-206ENST00000590454 MIER1Q8N108 512 aa28.53■■■□□ 2.16
R3HDM4-206ENST00000590454 PLEKHF1Q96S99 279 aa28.53■■■□□ 2.16
R3HDM4-206ENST00000590454 ATP6V1AP38606 617 aa28.52■■■□□ 2.16
R3HDM4-206ENST00000590454 WDR43Q15061 677 aaKnown RBP eCLIP28.52■■■□□ 2.16
R3HDM4-206ENST00000590454 MMP10P09238 476 aa28.51■■■□□ 2.15
R3HDM4-206ENST00000590454 APLP1P51693 650 aa28.51■■■□□ 2.15
R3HDM4-206ENST00000590454 ITPK1Q13572 414 aa28.51■■■□□ 2.15
R3HDM4-206ENST00000590454 PNISRQ8TF01 805 aaKnown RBP28.51■■■□□ 2.15
R3HDM4-206ENST00000590454 ASAP1Q9ULH1 1129 aa28.51■■■□□ 2.15
R3HDM4-206ENST00000590454 IFNL2Q8IZJ0 200 aa28.5■■■□□ 2.15
R3HDM4-206ENST00000590454 TGFB2P61812 414 aa28.49■■■□□ 2.15
R3HDM4-206ENST00000590454 CCDC146Q8IYE0 955 aa28.49■■■□□ 2.15
R3HDM4-206ENST00000590454 CICQ96RK0 1608 aaPredicted RBP28.47■■■□□ 2.15
R3HDM4-206ENST00000590454 TOMM70O94826 608 aa28.47■■■□□ 2.15
R3HDM4-206ENST00000590454 BCS1LQ9Y276 419 aa28.46■■■□□ 2.15
R3HDM4-206ENST00000590454 KDM6AO15550 1401 aaPredicted RBP28.45■■■□□ 2.15
R3HDM4-206ENST00000590454 C1orf141Q5JVX7 400 aa28.45■■■□□ 2.14
R3HDM4-206ENST00000590454 TRAPPC3LQ5T215 181 aa28.45■■■□□ 2.14
R3HDM4-206ENST00000590454 NLGN1Q8N2Q7 840 aa28.45■■■□□ 2.14
R3HDM4-206ENST00000590454 ATG3Q9NT62 314 aa28.45■■■□□ 2.14
R3HDM4-206ENST00000590454 PXDNLA1KZ92 1463 aa28.45■■■□□ 2.14
R3HDM4-206ENST00000590454 RTCBQ9Y3I0 505 aaKnown RBP28.44■■■□□ 2.14
R3HDM4-206ENST00000590454 A0A0G2JLW4 131 aa28.43■■■□□ 2.14
R3HDM4-206ENST00000590454 AKAP4Q5JQC9 854 aa28.43■■■□□ 2.14
R3HDM4-206ENST00000590454 ARHGAP27Q6ZUM4 889 aa28.42■■■□□ 2.14
R3HDM4-206ENST00000590454 GAS2L2Q8NHY3 880 aa28.42■■■□□ 2.14
R3HDM4-206ENST00000590454 LGR6Q9HBX8 967 aa28.42■■■□□ 2.14
R3HDM4-206ENST00000590454 DNAJC5GQ8N7S2 189 aa28.41■■■□□ 2.14
R3HDM4-206ENST00000590454 DCAF5Q96JK2 942 aa28.4■■■□□ 2.14
R3HDM4-206ENST00000590454 CCDC87Q9NVE4 849 aa28.4■■■□□ 2.14
R3HDM4-206ENST00000590454 CCER2I3L3R5 266 aa28.39■■■□□ 2.14
R3HDM4-206ENST00000590454 PNNQ9H307 717 aaKnown RBP28.39■■■□□ 2.14
R3HDM4-206ENST00000590454 MAPK8IP3Q9UPT6 1336 aa28.39■■■□□ 2.13
R3HDM4-206ENST00000590454 SCN11AQ9UI33 1791 aa28.38■■■□□ 2.13
R3HDM4-206ENST00000590454 ADRA2BP18089 450 aa28.38■■■□□ 2.13
R3HDM4-206ENST00000590454 RUNDC1Q96C34 613 aa28.38■■■□□ 2.13
R3HDM4-206ENST00000590454 VIRMAQ69YN4 1812 aaKnown RBP28.38■■■□□ 2.13
R3HDM4-206ENST00000590454 C10orf71Q711Q0 1435 aa28.37■■■□□ 2.13
R3HDM4-206ENST00000590454 HSP90AB1P08238 724 aaKnown RBP28.37■■■□□ 2.13
R3HDM4-206ENST00000590454 DPEP1P16444 411 aa28.37■■■□□ 2.13
R3HDM4-206ENST00000590454 RC3H1Q5TC82 1133 aaKnown RBP28.37■■■□□ 2.13
R3HDM4-206ENST00000590454 FAM9BQ8IZU0 186 aa28.37■■■□□ 2.13
R3HDM4-206ENST00000590454 ARHGEF1Q92888 912 aaKnown RBP28.37■■■□□ 2.13
R3HDM4-206ENST00000590454 DLG5Q8TDM6 1919 aa28.37■■■□□ 2.13
R3HDM4-206ENST00000590454 ADAMTS7Q9UKP4 1686 aa28.36■■■□□ 2.13
R3HDM4-206ENST00000590454 GNAT3A8MTJ3 354 aa28.36■■■□□ 2.13
R3HDM4-206ENST00000590454 RNMTO43148 476 aaKnown RBP28.36■■■□□ 2.13
R3HDM4-206ENST00000590454 NFE2L2Q16236 605 aa28.36■■■□□ 2.13
R3HDM4-206ENST00000590454 RBM42Q9BTD8 480 aaKnown RBP28.36■■■□□ 2.13
R3HDM4-206ENST00000590454 NMRK2Q9NPI5 230 aa28.36■■■□□ 2.13
R3HDM4-206ENST00000590454 RRP7AQ9Y3A4 280 aaKnown RBP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms