RNA–Protein interactions for RNA: ENST00000590325.1

CALR-207, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-207ENST00000590325 ADAMTS7Q9UKP4 1686 aa18.91■□□□□ 0.62
CALR-207ENST00000590325 RGPD3A6NKT7 1758 aaPredicted RBP18.91■□□□□ 0.62
CALR-207ENST00000590325 RGPD4Q7Z3J3 1758 aa18.91■□□□□ 0.62
CALR-207ENST00000590325 KCNQ4P56696 695 aa18.9■□□□□ 0.62
CALR-207ENST00000590325 RIPK4P57078 832 aa18.9■□□□□ 0.62
CALR-207ENST00000590325 TEFQ10587 303 aa18.9■□□□□ 0.62
CALR-207ENST00000590325 CCNL1Q9UK58 526 aaPredicted RBP18.9■□□□□ 0.62
CALR-207ENST00000590325 RRP7AQ9Y3A4 280 aaKnown RBP18.9■□□□□ 0.62
CALR-207ENST00000590325 ITGB4P16144 1822 aa18.89■□□□□ 0.61
CALR-207ENST00000590325 CCER2I3L3R5 266 aa18.89■□□□□ 0.61
CALR-207ENST00000590325 LOC102724428A0A0B4J2F2 783 aa18.88■□□□□ 0.61
CALR-207ENST00000590325 SIK1P57059 783 aa18.88■□□□□ 0.61
CALR-207ENST00000590325 APAF1O14727 1248 aa18.87■□□□□ 0.61
CALR-207ENST00000590325 SLC39A6Q13433 755 aa18.87■□□□□ 0.61
CALR-207ENST00000590325 NEUROD2Q15784 382 aa18.87■□□□□ 0.61
CALR-207ENST00000590325 MIER1Q8N108 512 aa18.87■□□□□ 0.61
CALR-207ENST00000590325 RREB1Q92766 1687 aa18.87■□□□□ 0.61
CALR-207ENST00000590325 ANO8Q9HCE9 1232 aaPredicted RBP18.87■□□□□ 0.61
CALR-207ENST00000590325 SCN11AQ9UI33 1791 aa18.87■□□□□ 0.61
CALR-207ENST00000590325 NBPF14Q5TI25 921 aa18.86■□□□□ 0.61
CALR-207ENST00000590325 THUMPD2Q9BTF0 503 aaKnown RBP18.86■□□□□ 0.61
CALR-207ENST00000590325 LMOD3Q0VAK6 560 aa18.85■□□□□ 0.61
CALR-207ENST00000590325 FAM9BQ8IZU0 186 aa18.85■□□□□ 0.61
CALR-207ENST00000590325 SLC4A9Q96Q91 983 aa18.85■□□□□ 0.61
CALR-207ENST00000590325 TRIM35Q9UPQ4 493 aa18.85■□□□□ 0.61
CALR-207ENST00000590325 SRCAPQ6ZRS2 3230 aa18.85■□□□□ 0.61
CALR-207ENST00000590325 PTCD1O75127 700 aaKnown RBP18.84■□□□□ 0.61
CALR-207ENST00000590325 RBM42Q9BTD8 480 aaKnown RBP18.84■□□□□ 0.61
CALR-207ENST00000590325 NUP188Q5SRE5 1749 aa18.83■□□□□ 0.61
CALR-207ENST00000590325 BTBD11A6QL63 1104 aa18.83■□□□□ 0.6
CALR-207ENST00000590325 ATP6V1AP38606 617 aa18.83■□□□□ 0.6
CALR-207ENST00000590325 ITPK1Q13572 414 aa18.83■□□□□ 0.6
CALR-207ENST00000590325 R3HDM1Q15032 1099 aaKnown RBP18.83■□□□□ 0.6
CALR-207ENST00000590325 TAF7Q15545 349 aaPredicted RBP18.83■□□□□ 0.6
CALR-207ENST00000590325 ZNF790Q6PG37 636 aa18.83■□□□□ 0.6
CALR-207ENST00000590325 LY75O60449 1722 aa18.83■□□□□ 0.6
CALR-207ENST00000590325 ZNF827Q17R98 1081 aa18.82■□□□□ 0.6
CALR-207ENST00000590325 AKT1S1Q96B36 256 aa18.82■□□□□ 0.6
CALR-207ENST00000590325 STK32BQ9NY57 414 aa18.82■□□□□ 0.6
CALR-207ENST00000590325 PSDA5PKW4 1024 aaPredicted RBP18.81■□□□□ 0.6
CALR-207ENST00000590325 KCNQ3O43525 872 aa18.81■□□□□ 0.6
CALR-207ENST00000590325 SLC15A2Q16348 729 aa18.81■□□□□ 0.6
CALR-207ENST00000590325 TTC5Q8N0Z6 440 aa18.81■□□□□ 0.6
CALR-207ENST00000590325 HMGB2P26583 209 aaKnown RBP18.8■□□□□ 0.6
CALR-207ENST00000590325 LINC00116Q8NCU8 138 aa18.8■□□□□ 0.6
CALR-207ENST00000590325 MIS18AQ9NYP9 233 aa18.8■□□□□ 0.6
CALR-207ENST00000590325 PAPPAQ13219 1627 aa18.8■□□□□ 0.6
CALR-207ENST00000590325 ZNF496Q96IT1 587 aaPredicted RBP18.79■□□□□ 0.6
CALR-207ENST00000590325 KCPQ6ZWJ8 1503 aa18.79■□□□□ 0.6
CALR-207ENST00000590325 SENP3-EIF4A1A0A087X0R7 540 aa18.78■□□□□ 0.6
CALR-207ENST00000590325 DLG5Q8TDM6 1919 aa18.77■□□□□ 0.6
CALR-207ENST00000590325 VSIG10Q8N0Z9 540 aa18.77■□□□□ 0.6
CALR-207ENST00000590325 SIPA1L3O60292 1781 aaPredicted RBP18.76■□□□□ 0.59
CALR-207ENST00000590325 NCBP3Q53F19 620 aaKnown RBP18.76■□□□□ 0.59
CALR-207ENST00000590325 DNAJC10Q8IXB1 793 aa18.76■□□□□ 0.59
CALR-207ENST00000590325 FMNL2Q96PY5 1086 aa18.76■□□□□ 0.59
CALR-207ENST00000590325 TFCP2L1Q9NZI6 479 aa18.76■□□□□ 0.59
CALR-207ENST00000590325 CCDC27Q2M243 656 aa18.75■□□□□ 0.59
CALR-207ENST00000590325 BABAM1Q9NWV8 329 aa18.75■□□□□ 0.59
CALR-207ENST00000590325 HEG1Q9ULI3 1381 aa18.75■□□□□ 0.59
CALR-207ENST00000590325 VIRMAQ69YN4 1812 aaKnown RBP18.74■□□□□ 0.59
CALR-207ENST00000590325 RC3H1Q5TC82 1133 aaKnown RBP18.74■□□□□ 0.59
CALR-207ENST00000590325 AK7Q96M32 723 aa18.74■□□□□ 0.59
CALR-207ENST00000590325 PDGFDQ9GZP0 370 aaPredicted RBP18.74■□□□□ 0.59
CALR-207ENST00000590325 TSPYL4Q9UJ04 414 aa18.74■□□□□ 0.59
CALR-207ENST00000590325 CNTNAP4Q9C0A0 1308 aa18.74■□□□□ 0.59
CALR-207ENST00000590325 CHL1O00533 1208 aa18.73■□□□□ 0.59
CALR-207ENST00000590325 CYP19A1P11511 503 aaPredicted RBP18.73■□□□□ 0.59
CALR-207ENST00000590325 AMIGO3Q86WK7 504 aa18.73■□□□□ 0.59
CALR-207ENST00000590325 WWC1Q8IX03 1113 aa18.73■□□□□ 0.59
CALR-207ENST00000590325 PNPLA7Q6ZV29 1317 aa18.73■□□□□ 0.59
CALR-207ENST00000590325 ZNF831Q5JPB2 1677 aa18.73■□□□□ 0.59
CALR-207ENST00000590325 CRKLP46109 303 aaKnown RBP18.72■□□□□ 0.59
CALR-207ENST00000590325 EIF4A1P60842 406 aaKnown RBP18.72■□□□□ 0.59
CALR-207ENST00000590325 CALD1Q05682 793 aaKnown RBP18.72■□□□□ 0.59
CALR-207ENST00000590325 SALL2Q9Y467 1007 aaPredicted RBP18.72■□□□□ 0.59
CALR-207ENST00000590325 C5P01031 1676 aa18.72■□□□□ 0.59
CALR-207ENST00000590325 C4BP0C0L5 1744 aa18.71■□□□□ 0.59
CALR-207ENST00000590325 GNPATO15228 680 aa18.71■□□□□ 0.59
CALR-207ENST00000590325 SNRPA1P09661 255 aaKnown RBP18.71■□□□□ 0.59
CALR-207ENST00000590325 ZNF853P0CG23 659 aa18.71■□□□□ 0.59
CALR-207ENST00000590325 INTS5Q6P9B9 1019 aaKnown RBP18.71■□□□□ 0.59
CALR-207ENST00000590325 CFAP44Q96MT7 982 aa18.71■□□□□ 0.59
CALR-207ENST00000590325 TEX13AQ9BXU3 409 aaPredicted RBP18.71■□□□□ 0.59
CALR-207ENST00000590325 LAS1LQ9Y4W2 734 aaKnown RBP18.71■□□□□ 0.59
CALR-207ENST00000590325 UBR2Q8IWV8 1755 aa18.7■□□□□ 0.58
CALR-207ENST00000590325 PRAMEF22A3QJZ6 481 aa18.7■□□□□ 0.58
CALR-207ENST00000590325 STARD3NLO95772 234 aa18.7■□□□□ 0.58
CALR-207ENST00000590325 SMIM5Q71RC9 77 aa18.7■□□□□ 0.58
CALR-207ENST00000590325 COL23A1Q86Y22 540 aaPredicted RBP18.7■□□□□ 0.58
CALR-207ENST00000590325 NGEFQ8N5V2 710 aa18.7■□□□□ 0.58
CALR-207ENST00000590325 IFT57Q9NWB7 429 aa18.7■□□□□ 0.58
CALR-207ENST00000590325 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.69■□□□□ 0.58
CALR-207ENST00000590325 CCDC87Q9NVE4 849 aa18.69■□□□□ 0.58
CALR-207ENST00000590325 CICQ96RK0 1608 aaPredicted RBP18.68■□□□□ 0.58
CALR-207ENST00000590325 TAF1LQ8IZX4 1826 aa18.68■□□□□ 0.58
CALR-207ENST00000590325 GIGYF1O75420 1035 aaPredicted RBP18.68■□□□□ 0.58
CALR-207ENST00000590325 RPS6KA4O75676 772 aa18.68■□□□□ 0.58
CALR-207ENST00000590325 PHF14O94880 888 aa18.68■□□□□ 0.58
CALR-207ENST00000590325 SSFA2P28290 1259 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms