RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 ATP6V1AP38606 617 aa18.57■□□□□ 0.56
NEDD4L-228ENST00000590248 CABP4P57796 275 aa18.57■□□□□ 0.56
NEDD4L-228ENST00000590248 ITPK1Q13572 414 aa18.57■□□□□ 0.56
NEDD4L-228ENST00000590248 LINC00116Q8NCU8 138 aa18.57■□□□□ 0.56
NEDD4L-228ENST00000590248 NFATC2IPQ8NCF5 419 aa18.56■□□□□ 0.56
NEDD4L-228ENST00000590248 COL3A1P02461 1466 aaPredicted RBP18.55■□□□□ 0.56
NEDD4L-228ENST00000590248 U2SURPO15042 1029 aaKnown RBP18.55■□□□□ 0.56
NEDD4L-228ENST00000590248 PHF14O94880 888 aa18.55■□□□□ 0.56
NEDD4L-228ENST00000590248 MSL1Q68DK7 614 aa18.55■□□□□ 0.56
NEDD4L-228ENST00000590248 KLHL34Q8N239 644 aa18.55■□□□□ 0.56
NEDD4L-228ENST00000590248 AK7Q96M32 723 aa18.55■□□□□ 0.56
NEDD4L-228ENST00000590248 SLC4A9Q96Q91 983 aa18.55■□□□□ 0.56
NEDD4L-228ENST00000590248 RBM42Q9BTD8 480 aaKnown RBP18.55■□□□□ 0.56
NEDD4L-228ENST00000590248 MTHFSDQ2M296 383 aaKnown RBP18.54■□□□□ 0.56
NEDD4L-228ENST00000590248 LGR6Q9HBX8 967 aa18.54■□□□□ 0.56
NEDD4L-228ENST00000590248 POLD1P28340 1107 aa18.53■□□□□ 0.56
NEDD4L-228ENST00000590248 AKAP4Q5JQC9 854 aa18.53■□□□□ 0.56
NEDD4L-228ENST00000590248 MYH14Q7Z406 1995 aaKnown RBP18.51■□□□□ 0.55
NEDD4L-228ENST00000590248 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.51■□□□□ 0.55
NEDD4L-228ENST00000590248 PPP2R1AP30153 589 aa18.51■□□□□ 0.55
NEDD4L-228ENST00000590248 GNPATO15228 680 aa18.5■□□□□ 0.55
NEDD4L-228ENST00000590248 PTCD1O75127 700 aaKnown RBP18.5■□□□□ 0.55
NEDD4L-228ENST00000590248 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
NEDD4L-228ENST00000590248 HMGB2P26583 209 aaKnown RBP18.49■□□□□ 0.55
NEDD4L-228ENST00000590248 FLAD1Q8NFF5 587 aa18.49■□□□□ 0.55
NEDD4L-228ENST00000590248 COL5A3P25940 1745 aaPredicted RBP18.49■□□□□ 0.55
NEDD4L-228ENST00000590248 RNMTO43148 476 aaKnown RBP18.48■□□□□ 0.55
NEDD4L-228ENST00000590248 CFAP53Q96M91 514 aa18.47■□□□□ 0.55
NEDD4L-228ENST00000590248 UTRNP46939 3433 aa18.47■□□□□ 0.55
NEDD4L-228ENST00000590248 ZNF831Q5JPB2 1677 aa18.47■□□□□ 0.55
NEDD4L-228ENST00000590248 SSFA2P28290 1259 aa18.46■□□□□ 0.55
NEDD4L-228ENST00000590248 SLC39A6Q13433 755 aa18.46■□□□□ 0.55
NEDD4L-228ENST00000590248 NLGN2Q8NFZ4 835 aa18.46■□□□□ 0.55
NEDD4L-228ENST00000590248 SLC52A2Q9HAB3 445 aa18.46■□□□□ 0.55
NEDD4L-228ENST00000590248 PHACTR3Q96KR7 559 aa18.45■□□□□ 0.54
NEDD4L-228ENST00000590248 TJP1Q07157 1748 aa18.44■□□□□ 0.54
NEDD4L-228ENST00000590248 ADAMTS7Q9UKP4 1686 aa18.44■□□□□ 0.54
NEDD4L-228ENST00000590248 MAP3K5Q99683 1374 aa18.43■□□□□ 0.54
NEDD4L-228ENST00000590248 U2AF1L5P0DN76 240 aaPredicted RBP18.43■□□□□ 0.54
NEDD4L-228ENST00000590248 PRKAR2BP31323 418 aa18.43■□□□□ 0.54
NEDD4L-228ENST00000590248 U2AF1Q01081 240 aaKnown RBP eCLIP18.43■□□□□ 0.54
NEDD4L-228ENST00000590248 TRAPPC3LQ5T215 181 aa18.43■□□□□ 0.54
NEDD4L-228ENST00000590248 IL17REQ8NFR9 667 aa18.43■□□□□ 0.54
NEDD4L-228ENST00000590248 RSPH6AQ9H0K4 717 aa18.43■□□□□ 0.54
NEDD4L-228ENST00000590248 RTCBQ9Y3I0 505 aaKnown RBP18.43■□□□□ 0.54
NEDD4L-228ENST00000590248 YY1P25490 414 aa18.42■□□□□ 0.54
NEDD4L-228ENST00000590248 ARHGEF1Q92888 912 aaKnown RBP18.42■□□□□ 0.54
NEDD4L-228ENST00000590248 CHD4Q14839 1912 aa18.42■□□□□ 0.54
NEDD4L-228ENST00000590248 DDX10Q13206 875 aaKnown RBP18.41■□□□□ 0.54
NEDD4L-228ENST00000590248 RC3H1Q5TC82 1133 aaKnown RBP18.41■□□□□ 0.54
NEDD4L-228ENST00000590248 PELP1Q8IZL8 1130 aaKnown RBP18.41■□□□□ 0.54
NEDD4L-228ENST00000590248 GAS2L2Q8NHY3 880 aa18.41■□□□□ 0.54
NEDD4L-228ENST00000590248 NUDCQ9Y266 331 aa18.41■□□□□ 0.54
NEDD4L-228ENST00000590248 CNTNAP4Q9C0A0 1308 aa18.41■□□□□ 0.54
NEDD4L-228ENST00000590248 MRC1P22897 1456 aa18.4■□□□□ 0.54
NEDD4L-228ENST00000590248 GNAT3A8MTJ3 354 aa18.4■□□□□ 0.54
NEDD4L-228ENST00000590248 RPS6KA4O75676 772 aa18.4■□□□□ 0.54
NEDD4L-228ENST00000590248 CRKLP46109 303 aaKnown RBP18.4■□□□□ 0.54
NEDD4L-228ENST00000590248 GPR162Q16538 588 aa18.4■□□□□ 0.54
NEDD4L-228ENST00000590248 DNAJC10Q8IXB1 793 aa18.4■□□□□ 0.54
NEDD4L-228ENST00000590248 C4AP0C0L4 1744 aa18.4■□□□□ 0.54
NEDD4L-228ENST00000590248 SIPA1L3O60292 1781 aaPredicted RBP18.39■□□□□ 0.53
NEDD4L-228ENST00000590248 GOLGB1Q14789 3259 aaKnown RBP18.38■□□□□ 0.53
NEDD4L-228ENST00000590248 RFC4P35249 363 aa18.37■□□□□ 0.53
NEDD4L-228ENST00000590248 INTS5Q6P9B9 1019 aaKnown RBP18.37■□□□□ 0.53
NEDD4L-228ENST00000590248 KCPQ6ZWJ8 1503 aa18.37■□□□□ 0.53
NEDD4L-228ENST00000590248 UBR2Q8IWV8 1755 aa18.37■□□□□ 0.53
NEDD4L-228ENST00000590248 TEFQ10587 303 aa18.36■□□□□ 0.53
NEDD4L-228ENST00000590248 WWC3Q9ULE0 1092 aa18.36■□□□□ 0.53
NEDD4L-228ENST00000590248 DLG5Q8TDM6 1919 aa18.35■□□□□ 0.53
NEDD4L-228ENST00000590248 CICQ96RK0 1608 aaPredicted RBP18.35■□□□□ 0.53
NEDD4L-228ENST00000590248 FCHSD2O94868 740 aa18.35■□□□□ 0.53
NEDD4L-228ENST00000590248 MMP10P09238 476 aa18.35■□□□□ 0.53
NEDD4L-228ENST00000590248 SRP68Q9UHB9 627 aaKnown RBP18.35■□□□□ 0.53
NEDD4L-228ENST00000590248 CD2APQ9Y5K6 639 aa18.35■□□□□ 0.53
NEDD4L-228ENST00000590248 CYP19A1P11511 503 aaPredicted RBP18.34■□□□□ 0.53
NEDD4L-228ENST00000590248 GYS1P13807 737 aa18.34■□□□□ 0.53
NEDD4L-228ENST00000590248 ADRA2BP18089 450 aa18.34■□□□□ 0.53
NEDD4L-228ENST00000590248 KCNQ3O43525 872 aa18.33■□□□□ 0.52
NEDD4L-228ENST00000590248 YBX3P16989 372 aaKnown RBP eCLIP18.33■□□□□ 0.52
NEDD4L-228ENST00000590248 DCTN1Q14203 1278 aa18.33■□□□□ 0.52
NEDD4L-228ENST00000590248 MCM10Q7L590 875 aa18.33■□□□□ 0.52
NEDD4L-228ENST00000590248 TTC5Q8N0Z6 440 aa18.33■□□□□ 0.52
NEDD4L-228ENST00000590248 NLGN1Q8N2Q7 840 aa18.33■□□□□ 0.52
NEDD4L-228ENST00000590248 CCDC87Q9NVE4 849 aa18.33■□□□□ 0.52
NEDD4L-228ENST00000590248 ZNF496Q96IT1 587 aaPredicted RBP18.32■□□□□ 0.52
NEDD4L-228ENST00000590248 FKBP8Q14318 412 aa18.31■□□□□ 0.52
NEDD4L-228ENST00000590248 ZNF790Q6PG37 636 aa18.31■□□□□ 0.52
NEDD4L-228ENST00000590248 ZBTB1Q9Y2K1 713 aa18.31■□□□□ 0.52
NEDD4L-228ENST00000590248 N4BP2Q86UW6 1770 aaPredicted RBP18.31■□□□□ 0.52
NEDD4L-228ENST00000590248 CEMIPQ8WUJ3 1361 aa18.3■□□□□ 0.52
NEDD4L-228ENST00000590248 BTBD11A6QL63 1104 aa18.3■□□□□ 0.52
NEDD4L-228ENST00000590248 CANXP27824 592 aaKnown RBP18.3■□□□□ 0.52
NEDD4L-228ENST00000590248 VSIG10Q8N0Z9 540 aa18.3■□□□□ 0.52
NEDD4L-228ENST00000590248 RTF1Q92541 710 aaKnown RBP18.3■□□□□ 0.52
NEDD4L-228ENST00000590248 SOS1Q07889 1333 aaPredicted RBP18.29■□□□□ 0.52
NEDD4L-228ENST00000590248 KIF13BQ9NQT8 1826 aa18.29■□□□□ 0.52
NEDD4L-228ENST00000590248 USP42Q9H9J4 1324 aaKnown RBP18.28■□□□□ 0.52
NEDD4L-228ENST00000590248 RALBP1Q15311 655 aa18.28■□□□□ 0.52
NEDD4L-228ENST00000590248 USPL1Q5W0Q7 1092 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms