RNA–Protein interactions for RNA: ENST00000590162.1

TMC6-214, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-214ENST00000590162 ATG3Q9NT62 314 aa20.23■□□□□ 0.83
TMC6-214ENST00000590162 YY1P25490 414 aa20.22■□□□□ 0.83
TMC6-214ENST00000590162 RBM42Q9BTD8 480 aaKnown RBP20.22■□□□□ 0.83
TMC6-214ENST00000590162 PHF14O94880 888 aa20.21■□□□□ 0.83
TMC6-214ENST00000590162 SSFA2P28290 1259 aa20.21■□□□□ 0.83
TMC6-214ENST00000590162 AKAP4Q5JQC9 854 aa20.21■□□□□ 0.83
TMC6-214ENST00000590162 CFAP53Q96M91 514 aa20.21■□□□□ 0.83
TMC6-214ENST00000590162 KDM6AO15550 1401 aaPredicted RBP20.2■□□□□ 0.82
TMC6-214ENST00000590162 HMOX1P09601 288 aa20.2■□□□□ 0.82
TMC6-214ENST00000590162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.19■□□□□ 0.82
TMC6-214ENST00000590162 GNPATO15228 680 aa20.19■□□□□ 0.82
TMC6-214ENST00000590162 MSL1Q68DK7 614 aa20.19■□□□□ 0.82
TMC6-214ENST00000590162 LINC00116Q8NCU8 138 aa20.19■□□□□ 0.82
TMC6-214ENST00000590162 COL24A1Q17RW2 1714 aa20.19■□□□□ 0.82
TMC6-214ENST00000590162 U2SURPO15042 1029 aaKnown RBP20.18■□□□□ 0.82
TMC6-214ENST00000590162 ITPK1Q13572 414 aa20.16■□□□□ 0.82
TMC6-214ENST00000590162 GPR162Q16538 588 aa20.16■□□□□ 0.82
TMC6-214ENST00000590162 NFATC2IPQ8NCF5 419 aa20.16■□□□□ 0.82
TMC6-214ENST00000590162 RTCBQ9Y3I0 505 aaKnown RBP20.15■□□□□ 0.82
TMC6-214ENST00000590162 ZNF831Q5JPB2 1677 aa20.15■□□□□ 0.82
TMC6-214ENST00000590162 UBR3Q6ZT12 1888 aa20.14■□□□□ 0.81
TMC6-214ENST00000590162 PTCD1O75127 700 aaKnown RBP20.14■□□□□ 0.81
TMC6-214ENST00000590162 PELP1Q8IZL8 1130 aaKnown RBP20.14■□□□□ 0.81
TMC6-214ENST00000590162 NUDCQ9Y266 331 aa20.14■□□□□ 0.81
TMC6-214ENST00000590162 COL3A1P02461 1466 aaPredicted RBP20.12■□□□□ 0.81
TMC6-214ENST00000590162 CNTNAP4Q9C0A0 1308 aa20.12■□□□□ 0.81
TMC6-214ENST00000590162 ADRA2BP18089 450 aa20.12■□□□□ 0.81
TMC6-214ENST00000590162 TRAPPC3LQ5T215 181 aa20.12■□□□□ 0.81
TMC6-214ENST00000590162 RC3H1Q5TC82 1133 aaKnown RBP20.12■□□□□ 0.81
TMC6-214ENST00000590162 SLC52A2Q9HAB3 445 aa20.12■□□□□ 0.81
TMC6-214ENST00000590162 SCN11AQ9UI33 1791 aa20.11■□□□□ 0.81
TMC6-214ENST00000590162 MTHFSDQ2M296 383 aaKnown RBP20.11■□□□□ 0.81
TMC6-214ENST00000590162 GAS2L2Q8NHY3 880 aa20.11■□□□□ 0.81
TMC6-214ENST00000590162 RNMTO43148 476 aaKnown RBP20.1■□□□□ 0.81
TMC6-214ENST00000590162 CD2APQ9Y5K6 639 aa20.1■□□□□ 0.81
TMC6-214ENST00000590162 AMIGO3Q86WK7 504 aa20.09■□□□□ 0.81
TMC6-214ENST00000590162 MRC1P22897 1456 aa20.09■□□□□ 0.81
TMC6-214ENST00000590162 RFC4P35249 363 aa20.08■□□□□ 0.81
TMC6-214ENST00000590162 NLGN2Q8NFZ4 835 aa20.08■□□□□ 0.81
TMC6-214ENST00000590162 SLC4A9Q96Q91 983 aa20.08■□□□□ 0.81
TMC6-214ENST00000590162 COL5A3P25940 1745 aaPredicted RBP20.07■□□□□ 0.8
TMC6-214ENST00000590162 RPS6KA4O75676 772 aa20.07■□□□□ 0.8
TMC6-214ENST00000590162 PPP2R1AP30153 589 aa20.07■□□□□ 0.8
TMC6-214ENST00000590162 SMIM5Q71RC9 77 aa20.07■□□□□ 0.8
TMC6-214ENST00000590162 NLGN1Q8N2Q7 840 aa20.07■□□□□ 0.8
TMC6-214ENST00000590162 LGR6Q9HBX8 967 aa20.07■□□□□ 0.8
TMC6-214ENST00000590162 GNAT3A8MTJ3 354 aa20.06■□□□□ 0.8
TMC6-214ENST00000590162 GRIN3BO60391 1043 aa20.06■□□□□ 0.8
TMC6-214ENST00000590162 TEFQ10587 303 aa20.06■□□□□ 0.8
TMC6-214ENST00000590162 TTC5Q8N0Z6 440 aa20.06■□□□□ 0.8
TMC6-214ENST00000590162 CRKLP46109 303 aaKnown RBP20.05■□□□□ 0.8
TMC6-214ENST00000590162 U2AF1L5P0DN76 240 aaPredicted RBP20.04■□□□□ 0.8
TMC6-214ENST00000590162 PRKAR2BP31323 418 aa20.04■□□□□ 0.8
TMC6-214ENST00000590162 U2AF1Q01081 240 aaKnown RBP eCLIP20.04■□□□□ 0.8
TMC6-214ENST00000590162 ARHGEF1Q92888 912 aaKnown RBP20.04■□□□□ 0.8
TMC6-214ENST00000590162 CICQ96RK0 1608 aaPredicted RBP20.04■□□□□ 0.8
TMC6-214ENST00000590162 NEFMP07197 916 aa20.03■□□□□ 0.8
TMC6-214ENST00000590162 MMP10P09238 476 aa20.03■□□□□ 0.8
TMC6-214ENST00000590162 ADAMTS7Q9UKP4 1686 aa20.03■□□□□ 0.8
TMC6-214ENST00000590162 SLC39A6Q13433 755 aa20.01■□□□□ 0.79
TMC6-214ENST00000590162 VSIG10Q8N0Z9 540 aa20.01■□□□□ 0.79
TMC6-214ENST00000590162 CCDC87Q9NVE4 849 aa20.01■□□□□ 0.79
TMC6-214ENST00000590162 TJP1Q07157 1748 aa20.01■□□□□ 0.79
TMC6-214ENST00000590162 FCHSD2O94868 740 aa20■□□□□ 0.79
TMC6-214ENST00000590162 DNAJC10Q8IXB1 793 aa20■□□□□ 0.79
TMC6-214ENST00000590162 RTF1Q92541 710 aaKnown RBP20■□□□□ 0.79
TMC6-214ENST00000590162 RSPH6AQ9H0K4 717 aa20■□□□□ 0.79
TMC6-214ENST00000590162 PARP3Q9Y6F1 533 aa20■□□□□ 0.79
TMC6-214ENST00000590162 GYS1P13807 737 aa19.99■□□□□ 0.79
TMC6-214ENST00000590162 VIRMAQ69YN4 1812 aaKnown RBP19.99■□□□□ 0.79
TMC6-214ENST00000590162 CHD4Q14839 1912 aa19.98■□□□□ 0.79
TMC6-214ENST00000590162 ZPR1O75312 459 aa19.98■□□□□ 0.79
TMC6-214ENST00000590162 KCPQ6ZWJ8 1503 aa19.97■□□□□ 0.79
TMC6-214ENST00000590162 STARD3NLO95772 234 aa19.97■□□□□ 0.79
TMC6-214ENST00000590162 USP42Q9H9J4 1324 aaKnown RBP19.97■□□□□ 0.79
TMC6-214ENST00000590162 UTRNP46939 3433 aa19.96■□□□□ 0.79
TMC6-214ENST00000590162 CYP19A1P11511 503 aaPredicted RBP19.96■□□□□ 0.79
TMC6-214ENST00000590162 YBX3P16989 372 aaKnown RBP eCLIP19.96■□□□□ 0.79
TMC6-214ENST00000590162 INTS5Q6P9B9 1019 aaKnown RBP19.96■□□□□ 0.79
TMC6-214ENST00000590162 IL17REQ8NFR9 667 aa19.96■□□□□ 0.79
TMC6-214ENST00000590162 TEX13AQ9BXU3 409 aaPredicted RBP19.96■□□□□ 0.79
TMC6-214ENST00000590162 C4AP0C0L4 1744 aa19.96■□□□□ 0.79
TMC6-214ENST00000590162 ZNF790Q6PG37 636 aa19.95■□□□□ 0.78
TMC6-214ENST00000590162 NPM2Q86SE8 214 aaKnown RBP19.95■□□□□ 0.78
TMC6-214ENST00000590162 ZNF784Q8NCA9 323 aaPredicted RBP19.95■□□□□ 0.78
TMC6-214ENST00000590162 PHACTR3Q96KR7 559 aa19.95■□□□□ 0.78
TMC6-214ENST00000590162 TGFB2P61812 414 aa19.94■□□□□ 0.78
TMC6-214ENST00000590162 PNNQ9H307 717 aaKnown RBP19.94■□□□□ 0.78
TMC6-214ENST00000590162 CEMIPQ8WUJ3 1361 aa19.94■□□□□ 0.78
TMC6-214ENST00000590162 MYH14Q7Z406 1995 aaKnown RBP19.94■□□□□ 0.78
TMC6-214ENST00000590162 UBR2Q8IWV8 1755 aa19.93■□□□□ 0.78
TMC6-214ENST00000590162 BTBD11A6QL63 1104 aa19.93■□□□□ 0.78
TMC6-214ENST00000590162 FMNL2Q96PY5 1086 aa19.93■□□□□ 0.78
TMC6-214ENST00000590162 SRP68Q9UHB9 627 aaKnown RBP19.93■□□□□ 0.78
TMC6-214ENST00000590162 SOS1Q07889 1333 aaPredicted RBP19.93■□□□□ 0.78
TMC6-214ENST00000590162 COL15A1P39059 1388 aa19.93■□□□□ 0.78
TMC6-214ENST00000590162 HEG1Q9ULI3 1381 aa19.92■□□□□ 0.78
TMC6-214ENST00000590162 C10orf71Q711Q0 1435 aa19.92■□□□□ 0.78
TMC6-214ENST00000590162 A0A087WZG4 1122 aa19.91■□□□□ 0.78
TMC6-214ENST00000590162 HTATSF1O43719 755 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms