RNA–Protein interactions for RNA: ENST00000589956.5

TNPO2-216, Transcript of transportin 2, humanhuman

TSL 5

Gene TNPO2, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-216ENST00000589956 ATG3Q9NT62 314 aa24.23■■□□□ 1.47
TNPO2-216ENST00000589956 NPC1L1Q9UHC9 1359 aa24.23■■□□□ 1.47
TNPO2-216ENST00000589956 CICQ96RK0 1608 aaPredicted RBP24.22■■□□□ 1.47
TNPO2-216ENST00000589956 ZNF530Q6P9A1 599 aaPredicted RBP24.22■■□□□ 1.47
TNPO2-216ENST00000589956 ITPK1Q13572 414 aa24.21■■□□□ 1.47
TNPO2-216ENST00000589956 SULT6B1Q6IMI4 303 aa24.21■■□□□ 1.47
TNPO2-216ENST00000589956 MSL1Q68DK7 614 aa24.2■■□□□ 1.46
TNPO2-216ENST00000589956 UTRNP46939 3433 aa24.19■■□□□ 1.46
TNPO2-216ENST00000589956 KLHL34Q8N239 644 aa24.19■■□□□ 1.46
TNPO2-216ENST00000589956 MYH14Q7Z406 1995 aaKnown RBP24.18■■□□□ 1.46
TNPO2-216ENST00000589956 SSFA2P28290 1259 aa24.18■■□□□ 1.46
TNPO2-216ENST00000589956 ATP6V1AP38606 617 aa24.18■■□□□ 1.46
TNPO2-216ENST00000589956 MTHFSP49914 203 aa24.18■■□□□ 1.46
TNPO2-216ENST00000589956 NLGN2Q8NFZ4 835 aa24.18■■□□□ 1.46
TNPO2-216ENST00000589956 ADAMTS7Q9UKP4 1686 aa24.18■■□□□ 1.46
TNPO2-216ENST00000589956 TJP1Q07157 1748 aa24.17■■□□□ 1.46
TNPO2-216ENST00000589956 COL3A1P02461 1466 aaPredicted RBP24.17■■□□□ 1.46
TNPO2-216ENST00000589956 C4AP0C0L4 1744 aa24.16■■□□□ 1.46
TNPO2-216ENST00000589956 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.16■■□□□ 1.46
TNPO2-216ENST00000589956 PHF14O94880 888 aa24.15■■□□□ 1.46
TNPO2-216ENST00000589956 C1orf141Q5JVX7 400 aa24.15■■□□□ 1.46
TNPO2-216ENST00000589956 CC2D1BQ5T0F9 858 aaKnown RBP24.15■■□□□ 1.46
TNPO2-216ENST00000589956 SMIM5Q71RC9 77 aa24.15■■□□□ 1.46
TNPO2-216ENST00000589956 SLC4A9Q96Q91 983 aa24.15■■□□□ 1.46
TNPO2-216ENST00000589956 MRC1P22897 1456 aa24.14■■□□□ 1.46
TNPO2-216ENST00000589956 ZEB1P37275 1124 aaPredicted RBP24.14■■□□□ 1.45
TNPO2-216ENST00000589956 GNPATO15228 680 aa24.13■■□□□ 1.45
TNPO2-216ENST00000589956 CABP4P57796 275 aa24.13■■□□□ 1.45
TNPO2-216ENST00000589956 KIF13BQ9NQT8 1826 aa24.12■■□□□ 1.45
TNPO2-216ENST00000589956 GPR162Q16538 588 aa24.12■■□□□ 1.45
TNPO2-216ENST00000589956 AKAP4Q5JQC9 854 aa24.1■■□□□ 1.45
TNPO2-216ENST00000589956 RBM42Q9BTD8 480 aaKnown RBP24.1■■□□□ 1.45
TNPO2-216ENST00000589956 CD2APQ9Y5K6 639 aa24.1■■□□□ 1.45
TNPO2-216ENST00000589956 CNTNAP4Q9C0A0 1308 aa24.1■■□□□ 1.45
TNPO2-216ENST00000589956 DIAPH1O60610 1272 aaKnown RBP24.09■■□□□ 1.45
TNPO2-216ENST00000589956 HMOX1P09601 288 aa24.08■■□□□ 1.45
TNPO2-216ENST00000589956 RC3H1Q5TC82 1133 aaKnown RBP24.08■■□□□ 1.45
TNPO2-216ENST00000589956 UBR2Q8IWV8 1755 aa24.08■■□□□ 1.44
TNPO2-216ENST00000589956 KIAA1551Q9HCM1 1747 aa24.07■■□□□ 1.44
TNPO2-216ENST00000589956 NFATC2IPQ8NCF5 419 aa24.07■■□□□ 1.44
TNPO2-216ENST00000589956 ZNF784Q8NCA9 323 aaPredicted RBP24.06■■□□□ 1.44
TNPO2-216ENST00000589956 YBX3P16989 372 aaKnown RBP eCLIP24.05■■□□□ 1.448e-7■■■■□ 21.8
TNPO2-216ENST00000589956 PELP1Q8IZL8 1130 aaKnown RBP24.05■■□□□ 1.44
TNPO2-216ENST00000589956 RTCBQ9Y3I0 505 aaKnown RBP24.05■■□□□ 1.44
TNPO2-216ENST00000589956 SIPA1L3O60292 1781 aaPredicted RBP24.05■■□□□ 1.44
TNPO2-216ENST00000589956 GOLGB1Q14789 3259 aaKnown RBP24.04■■□□□ 1.44
TNPO2-216ENST00000589956 ADRA2BP18089 450 aa24.04■■□□□ 1.44
TNPO2-216ENST00000589956 SLC52A2Q9HAB3 445 aa24.03■■□□□ 1.44
TNPO2-216ENST00000589956 KCPQ6ZWJ8 1503 aa24.03■■□□□ 1.44
TNPO2-216ENST00000589956 RNMTO43148 476 aaKnown RBP24.02■■□□□ 1.44
TNPO2-216ENST00000589956 PTCD1O75127 700 aaKnown RBP24.02■■□□□ 1.44
TNPO2-216ENST00000589956 RPS6KA4O75676 772 aa24.02■■□□□ 1.44
TNPO2-216ENST00000589956 MTHFSDQ2M296 383 aaKnown RBP24.02■■□□□ 1.44
TNPO2-216ENST00000589956 TRAPPC3LQ5T215 181 aa24.02■■□□□ 1.44
TNPO2-216ENST00000589956 LGR6Q9HBX8 967 aa24.02■■□□□ 1.44
TNPO2-216ENST00000589956 GRIN3BO60391 1043 aa24■■□□□ 1.43
TNPO2-216ENST00000589956 ARHGEF1Q92888 912 aaKnown RBP24■■□□□ 1.43
TNPO2-216ENST00000589956 N4BP2Q86UW6 1770 aaPredicted RBP24■■□□□ 1.43
TNPO2-216ENST00000589956 BRCA1P38398 1863 aaKnown RBP23.99■■□□□ 1.43
TNPO2-216ENST00000589956 CRKLP46109 303 aaKnown RBP23.99■■□□□ 1.43
TNPO2-216ENST00000589956 CNGB1Q14028 1251 aaPredicted RBP23.98■■□□□ 1.43
TNPO2-216ENST00000589956 MMP10P09238 476 aa23.97■■□□□ 1.43
TNPO2-216ENST00000589956 C10orf71Q711Q0 1435 aa23.96■■□□□ 1.43
TNPO2-216ENST00000589956 GYS1P13807 737 aa23.96■■□□□ 1.43
TNPO2-216ENST00000589956 NLGN1Q8N2Q7 840 aa23.96■■□□□ 1.43
TNPO2-216ENST00000589956 U2SURPO15042 1029 aaKnown RBP23.95■■□□□ 1.42
TNPO2-216ENST00000589956 PXDNLA1KZ92 1463 aa23.94■■□□□ 1.42
TNPO2-216ENST00000589956 RFC4P35249 363 aa23.94■■□□□ 1.42
TNPO2-216ENST00000589956 PPP2R1AP30153 589 aa23.93■■□□□ 1.42
TNPO2-216ENST00000589956 SLC39A6Q13433 755 aa23.93■■□□□ 1.42
TNPO2-216ENST00000589956 INTS5Q6P9B9 1019 aaKnown RBP23.93■■□□□ 1.42
TNPO2-216ENST00000589956 DDX10Q13206 875 aaKnown RBP23.92■■□□□ 1.42
TNPO2-216ENST00000589956 DNAJC10Q8IXB1 793 aa23.92■■□□□ 1.42
TNPO2-216ENST00000589956 USP42Q9H9J4 1324 aaKnown RBP23.91■■□□□ 1.42
TNPO2-216ENST00000589956 GAS2L2Q8NHY3 880 aa23.91■■□□□ 1.42
TNPO2-216ENST00000589956 CFAP53Q96M91 514 aa23.91■■□□□ 1.42
TNPO2-216ENST00000589956 CCDC87Q9NVE4 849 aa23.9■■□□□ 1.42
TNPO2-216ENST00000589956 AFDNP55196 1824 aaKnown RBP23.89■■□□□ 1.42
TNPO2-216ENST00000589956 ARFGEF1Q9Y6D6 1849 aa23.89■■□□□ 1.42
TNPO2-216ENST00000589956 SOS1Q07889 1333 aaPredicted RBP23.89■■□□□ 1.42
TNPO2-216ENST00000589956 CYP19A1P11511 503 aaPredicted RBP23.89■■□□□ 1.41
TNPO2-216ENST00000589956 VSIG10Q8N0Z9 540 aa23.89■■□□□ 1.41
TNPO2-216ENST00000589956 RSPH6AQ9H0K4 717 aa23.89■■□□□ 1.41
TNPO2-216ENST00000589956 NRXN2Q9P2S2 1712 aa23.88■■□□□ 1.41
TNPO2-216ENST00000589956 GNAT3A8MTJ3 354 aa23.88■■□□□ 1.41
TNPO2-216ENST00000589956 SRP68Q9UHB9 627 aaKnown RBP23.88■■□□□ 1.41
TNPO2-216ENST00000589956 CEMIPQ8WUJ3 1361 aa23.88■■□□□ 1.41
TNPO2-216ENST00000589956 TGFB2P61812 414 aa23.87■■□□□ 1.41
TNPO2-216ENST00000589956 IL17REQ8NFR9 667 aa23.87■■□□□ 1.41
TNPO2-216ENST00000589956 PARP3Q9Y6F1 533 aa23.87■■□□□ 1.41
TNPO2-216ENST00000589956 ADCY9O60503 1353 aa23.87■■□□□ 1.41
TNPO2-216ENST00000589956 PRKAR2BP31323 418 aa23.86■■□□□ 1.41
TNPO2-216ENST00000589956 FKBP8Q14318 412 aa23.85■■□□□ 1.41
TNPO2-216ENST00000589956 PHACTR3Q96KR7 559 aa23.85■■□□□ 1.41
TNPO2-216ENST00000589956 WWC3Q9ULE0 1092 aa23.85■■□□□ 1.41
TNPO2-216ENST00000589956 COL15A1P39059 1388 aa23.85■■□□□ 1.41
TNPO2-216ENST00000589956 DLG5Q8TDM6 1919 aa23.84■■□□□ 1.41
TNPO2-216ENST00000589956 SCN7AQ01118 1682 aa23.84■■□□□ 1.41
TNPO2-216ENST00000589956 NUDCQ9Y266 331 aa23.84■■□□□ 1.41
TNPO2-216ENST00000589956 ZBTB1Q9Y2K1 713 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms