RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 PROSER2Q86WR7 435 aaPredicted RBP23.73■■□□□ 1.39
PRKCSH-209ENST00000589838 ORAI2Q96SN7 254 aa23.73■■□□□ 1.39
PRKCSH-209ENST00000589838 MED1Q15648 1581 aaPredicted RBP23.73■■□□□ 1.39
PRKCSH-209ENST00000589838 HDGFL1Q5TGJ6 251 aa23.73■■□□□ 1.39
PRKCSH-209ENST00000589838 RGPD2P0DJD1 1756 aa23.72■■□□□ 1.39
PRKCSH-209ENST00000589838 C16orf71Q8IYS4 520 aaPredicted RBP23.71■■□□□ 1.39
PRKCSH-209ENST00000589838 KDM3BQ7LBC6 1761 aa23.7■■□□□ 1.39
PRKCSH-209ENST00000589838 NCAPD2Q15021 1401 aa23.7■■□□□ 1.39
PRKCSH-209ENST00000589838 TEFQ10587 303 aa23.7■■□□□ 1.38
PRKCSH-209ENST00000589838 ZNF530Q6P9A1 599 aaPredicted RBP23.7■■□□□ 1.38
PRKCSH-209ENST00000589838 NECTIN2Q92692 538 aa23.7■■□□□ 1.38
PRKCSH-209ENST00000589838 TRPM3Q9HCF6 1732 aaPredicted RBP23.7■■□□□ 1.38
PRKCSH-209ENST00000589838 ATP8B2P98198 1209 aa23.69■■□□□ 1.38
PRKCSH-209ENST00000589838 KRT28Q7Z3Y7 464 aa23.69■■□□□ 1.38
PRKCSH-209ENST00000589838 EIF4A1P60842 406 aaKnown RBP23.68■■□□□ 1.38
PRKCSH-209ENST00000589838 OSBPL3Q9H4L5 887 aa23.68■■□□□ 1.38
PRKCSH-209ENST00000589838 C19orf44Q9H6X5 657 aa23.68■■□□□ 1.38
PRKCSH-209ENST00000589838 OVOS2A0A0G2JMS6 1433 aa23.68■■□□□ 1.38
PRKCSH-209ENST00000589838 SMARCA5O60264 1052 aaPredicted RBP23.68■■□□□ 1.38
PRKCSH-209ENST00000589838 C1orf141Q5JVX7 400 aa23.68■■□□□ 1.38
PRKCSH-209ENST00000589838 APBB1O00213 710 aa23.67■■□□□ 1.38
PRKCSH-209ENST00000589838 LGR6Q9HBX8 967 aa23.67■■□□□ 1.38
PRKCSH-209ENST00000589838 MST1RQ04912 1400 aa23.67■■□□□ 1.38
PRKCSH-209ENST00000589838 C1orf167Q5SNV9 1468 aa23.66■■□□□ 1.38
PRKCSH-209ENST00000589838 LMOD2Q6P5Q4 547 aa23.66■■□□□ 1.38
PRKCSH-209ENST00000589838 SPRYD3Q8NCJ5 442 aa23.66■■□□□ 1.38
PRKCSH-209ENST00000589838 ANKRD24Q8TF21 1146 aa23.66■■□□□ 1.38
PRKCSH-209ENST00000589838 NCOA3Q9Y6Q9 1424 aa23.66■■□□□ 1.38
PRKCSH-209ENST00000589838 LRRC59Q96AG4 307 aaKnown RBP23.66■■□□□ 1.38
PRKCSH-209ENST00000589838 KIF2CQ99661 725 aa23.66■■□□□ 1.38
PRKCSH-209ENST00000589838 HSP90AB1P08238 724 aaKnown RBP23.65■■□□□ 1.38
PRKCSH-209ENST00000589838 SDSP20132 328 aa23.65■■□□□ 1.38
PRKCSH-209ENST00000589838 CAMTA1Q9Y6Y1 1673 aa23.65■■□□□ 1.38
PRKCSH-209ENST00000589838 BTBD11A6QL63 1104 aa23.64■■□□□ 1.38
PRKCSH-209ENST00000589838 XPCQ01831 940 aaPredicted RBP23.64■■□□□ 1.38
PRKCSH-209ENST00000589838 OTUD7AQ8TE49 926 aaPredicted RBP23.64■■□□□ 1.38
PRKCSH-209ENST00000589838 LRRCC1Q9C099 1032 aa23.64■■□□□ 1.38
PRKCSH-209ENST00000589838 UBTFL1P0CB47 393 aaPredicted RBP23.64■■□□□ 1.37
PRKCSH-209ENST00000589838 BCL11AQ9H165 835 aa23.64■■□□□ 1.37
PRKCSH-209ENST00000589838 CIZ1Q9ULV3 898 aaPredicted RBP23.64■■□□□ 1.37
PRKCSH-209ENST00000589838 RNMTO43148 476 aaKnown RBP23.63■■□□□ 1.37
PRKCSH-209ENST00000589838 SRCIN1Q9C0H9 1055 aa23.62■■□□□ 1.37
PRKCSH-209ENST00000589838 EIF2S2P20042 333 aaKnown RBP23.62■■□□□ 1.37
PRKCSH-209ENST00000589838 PDE1AP54750 535 aa23.62■■□□□ 1.37
PRKCSH-209ENST00000589838 USP44Q9H0E7 712 aa23.62■■□□□ 1.37
PRKCSH-209ENST00000589838 REC8O95072 547 aa23.61■■□□□ 1.37
PRKCSH-209ENST00000589838 RABEP1Q15276 862 aa23.61■■□□□ 1.37
PRKCSH-209ENST00000589838 PHAXQ9H814 394 aaKnown RBP23.61■■□□□ 1.37
PRKCSH-209ENST00000589838 LRRFIP2Q9Y608 721 aaKnown RBP23.61■■□□□ 1.37
PRKCSH-209ENST00000589838 LMTK3Q96Q04 1460 aa23.61■■□□□ 1.37
PRKCSH-209ENST00000589838 MPRIPQ6WCQ1 1025 aa23.6■■□□□ 1.37
PRKCSH-209ENST00000589838 USP26Q9BXU7 913 aa23.6■■□□□ 1.37
PRKCSH-209ENST00000589838 IBTKQ9P2D0 1353 aaPredicted RBP23.6■■□□□ 1.37
PRKCSH-209ENST00000589838 K7ELQ4 463 aaPredicted RBP23.6■■□□□ 1.37
PRKCSH-209ENST00000589838 EXOC6BQ9Y2D4 811 aa23.6■■□□□ 1.37
PRKCSH-209ENST00000589838 ALS2Q96Q42 1657 aa23.59■■□□□ 1.37
PRKCSH-209ENST00000589838 ATF3P18847 181 aa23.59■■□□□ 1.37
PRKCSH-209ENST00000589838 PNMA6EA0A0J9YXQ4 647 aa23.58■■□□□ 1.37
PRKCSH-209ENST00000589838 MCM4P33991 863 aa23.58■■□□□ 1.37
PRKCSH-209ENST00000589838 DDIT3P35638 169 aa23.58■■□□□ 1.37
PRKCSH-209ENST00000589838 HSP90AA1P07900 732 aaKnown RBP23.58■■□□□ 1.36
PRKCSH-209ENST00000589838 CHPF2Q9P2E5 772 aa23.58■■□□□ 1.36
PRKCSH-209ENST00000589838 DBF4Q9UBU7 674 aaPredicted RBP23.58■■□□□ 1.36
PRKCSH-209ENST00000589838 DCCP43146 1447 aa23.57■■□□□ 1.36
PRKCSH-209ENST00000589838 RAB11FIP3O75154 756 aa23.57■■□□□ 1.36
PRKCSH-209ENST00000589838 SSH3Q8TE77 659 aa23.57■■□□□ 1.36
PRKCSH-209ENST00000589838 DNAAF4Q8WXU2 420 aa23.57■■□□□ 1.36
PRKCSH-209ENST00000589838 ERC2O15083 957 aa23.56■■□□□ 1.36
PRKCSH-209ENST00000589838 SALL3Q9BXA9 1300 aa23.56■■□□□ 1.36
PRKCSH-209ENST00000589838 MX1P20591 662 aa23.56■■□□□ 1.36
PRKCSH-209ENST00000589838 RGPD5Q99666 1765 aa23.55■■□□□ 1.36
PRKCSH-209ENST00000589838 AOX1Q06278 1338 aa23.55■■□□□ 1.36
PRKCSH-209ENST00000589838 KCNQ3O43525 872 aa23.55■■□□□ 1.36
PRKCSH-209ENST00000589838 STAP2Q9UGK3 403 aa23.55■■□□□ 1.36
PRKCSH-209ENST00000589838 HDAC5Q9UQL6 1122 aa23.55■■□□□ 1.36
PRKCSH-209ENST00000589838 AXIN2Q9Y2T1 843 aa23.55■■□□□ 1.36
PRKCSH-209ENST00000589838 PLEKHG5O94827 1062 aa23.54■■□□□ 1.36
PRKCSH-209ENST00000589838 PXDNQ92626 1479 aa23.54■■□□□ 1.36
PRKCSH-209ENST00000589838 BEND3Q5T5X7 828 aa23.53■■□□□ 1.36
PRKCSH-209ENST00000589838 SIPA1L3O60292 1781 aaPredicted RBP23.53■■□□□ 1.36
PRKCSH-209ENST00000589838 ERBB3P21860 1342 aa23.53■■□□□ 1.36
PRKCSH-209ENST00000589838 PI4KAP2A4QPH2 592 aa23.53■■□□□ 1.36
PRKCSH-209ENST00000589838 POLA2Q14181 598 aa23.53■■□□□ 1.36
PRKCSH-209ENST00000589838 PI4KAP1Q8N8J0 262 aa23.53■■□□□ 1.36
PRKCSH-209ENST00000589838 ADAMTS7Q9UKP4 1686 aa23.53■■□□□ 1.36
PRKCSH-209ENST00000589838 DDX11L8A8MPP1 907 aa23.52■■□□□ 1.36
PRKCSH-209ENST00000589838 TUBGCP6Q96RT7 1819 aa23.52■■□□□ 1.36
PRKCSH-209ENST00000589838 HEG1Q9ULI3 1381 aa23.52■■□□□ 1.36
PRKCSH-209ENST00000589838 GIGYF1O75420 1035 aaPredicted RBP23.51■■□□□ 1.35
PRKCSH-209ENST00000589838 RAPGEF4Q8WZA2 1011 aa23.51■■□□□ 1.35
PRKCSH-209ENST00000589838 RBM42Q9BTD8 480 aaKnown RBP23.51■■□□□ 1.35
PRKCSH-209ENST00000589838 HSP90AB4PQ58FF6 505 aa23.51■■□□□ 1.35
PRKCSH-209ENST00000589838 ALDH1L1O75891 902 aa23.5■■□□□ 1.35
PRKCSH-209ENST00000589838 PPP1R42Q7Z4L9 355 aa23.5■■□□□ 1.35
PRKCSH-209ENST00000589838 TMEM94Q12767 1356 aa23.5■■□□□ 1.35
PRKCSH-209ENST00000589838 PLEKHG2Q9H7P9 1386 aa23.5■■□□□ 1.35
PRKCSH-209ENST00000589838 CD2BP2O95400 341 aaKnown RBP23.49■■□□□ 1.35
PRKCSH-209ENST00000589838 PTMSP20962 102 aa23.49■■□□□ 1.35
PRKCSH-209ENST00000589838 ZC3H6P61129 1189 aaKnown RBP23.49■■□□□ 1.35
PRKCSH-209ENST00000589838 HYPKQ9NX55 129 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms