RNA–Protein interactions for RNA: ENST00000589575.5

PTBP1-214, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-214ENST00000589575 LINC00116Q8NCU8 138 aa17.58■□□□□ 0.4
PTBP1-214ENST00000589575 MSL1Q68DK7 614 aa17.57■□□□□ 0.4
PTBP1-214ENST00000589575 NFATC2IPQ8NCF5 419 aa17.57■□□□□ 0.4
PTBP1-214ENST00000589575 SYT17Q9BSW7 474 aa17.57■□□□□ 0.4
PTBP1-214ENST00000589575 GNPATO15228 680 aa17.56■□□□□ 0.4
PTBP1-214ENST00000589575 ITPK1Q13572 414 aa17.56■□□□□ 0.4
PTBP1-214ENST00000589575 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.55■□□□□ 0.4
PTBP1-214ENST00000589575 PTCD1O75127 700 aaKnown RBP17.55■□□□□ 0.4
PTBP1-214ENST00000589575 MTHFSDQ2M296 383 aaKnown RBP17.55■□□□□ 0.4
PTBP1-214ENST00000589575 NUDCQ9Y266 331 aa17.55■□□□□ 0.4
PTBP1-214ENST00000589575 ITGB4P16144 1822 aa17.55■□□□□ 0.4
PTBP1-214ENST00000589575 PPP2R1AP30153 589 aa17.54■□□□□ 0.4
PTBP1-214ENST00000589575 SMIM5Q71RC9 77 aa17.54■□□□□ 0.4
PTBP1-214ENST00000589575 C5P01031 1676 aa17.53■□□□□ 0.4
PTBP1-214ENST00000589575 SSFA2P28290 1259 aa17.53■□□□□ 0.4
PTBP1-214ENST00000589575 LGR6Q9HBX8 967 aa17.53■□□□□ 0.4
PTBP1-214ENST00000589575 RNMTO43148 476 aaKnown RBP17.52■□□□□ 0.4
PTBP1-214ENST00000589575 COL3A1P02461 1466 aaPredicted RBP17.51■□□□□ 0.39
PTBP1-214ENST00000589575 C4BP0C0L5 1744 aa17.51■□□□□ 0.39
PTBP1-214ENST00000589575 U2AF1L5P0DN76 240 aaPredicted RBP17.51■□□□□ 0.39
PTBP1-214ENST00000589575 U2AF1Q01081 240 aaKnown RBP eCLIP17.51■□□□□ 0.39
PTBP1-214ENST00000589575 AMIGO3Q86WK7 504 aa17.51■□□□□ 0.39
PTBP1-214ENST00000589575 GAS2L2Q8NHY3 880 aa17.51■□□□□ 0.39
PTBP1-214ENST00000589575 SLC52A2Q9HAB3 445 aa17.51■□□□□ 0.39
PTBP1-214ENST00000589575 RTCBQ9Y3I0 505 aaKnown RBP17.51■□□□□ 0.39
PTBP1-214ENST00000589575 QSER1Q2KHR3 1735 aa17.5■□□□□ 0.39
PTBP1-214ENST00000589575 SLC4A9Q96Q91 983 aa17.5■□□□□ 0.39
PTBP1-214ENST00000589575 PRKAR2BP31323 418 aa17.49■□□□□ 0.39
PTBP1-214ENST00000589575 PELP1Q8IZL8 1130 aaKnown RBP17.49■□□□□ 0.39
PTBP1-214ENST00000589575 YY1P25490 414 aa17.48■□□□□ 0.39
PTBP1-214ENST00000589575 TRAPPC3LQ5T215 181 aa17.48■□□□□ 0.39
PTBP1-214ENST00000589575 TUBGCP6Q96RT7 1819 aa17.48■□□□□ 0.39
PTBP1-214ENST00000589575 MAP3K5Q99683 1374 aa17.48■□□□□ 0.39
PTBP1-214ENST00000589575 GNAT3A8MTJ3 354 aa17.47■□□□□ 0.39
PTBP1-214ENST00000589575 SLC39A6Q13433 755 aa17.47■□□□□ 0.39
PTBP1-214ENST00000589575 GPR162Q16538 588 aa17.47■□□□□ 0.39
PTBP1-214ENST00000589575 RC3H1Q5TC82 1133 aaKnown RBP17.47■□□□□ 0.39
PTBP1-214ENST00000589575 CNTNAP4Q9C0A0 1308 aa17.47■□□□□ 0.39
PTBP1-214ENST00000589575 TEFQ10587 303 aa17.46■□□□□ 0.39
PTBP1-214ENST00000589575 RSPH6AQ9H0K4 717 aa17.46■□□□□ 0.39
PTBP1-214ENST00000589575 RFC4P35249 363 aa17.45■□□□□ 0.38
PTBP1-214ENST00000589575 DDX10Q13206 875 aaKnown RBP17.45■□□□□ 0.38
PTBP1-214ENST00000589575 TTC5Q8N0Z6 440 aa17.45■□□□□ 0.38
PTBP1-214ENST00000589575 NLGN2Q8NFZ4 835 aa17.45■□□□□ 0.38
PTBP1-214ENST00000589575 TAF1LQ8IZX4 1826 aa17.44■□□□□ 0.38
PTBP1-214ENST00000589575 RPS6KA4O75676 772 aa17.44■□□□□ 0.38
PTBP1-214ENST00000589575 NEFMP07197 916 aa17.44■□□□□ 0.38
PTBP1-214ENST00000589575 ADRA2BP18089 450 aa17.44■□□□□ 0.38
PTBP1-214ENST00000589575 CRKLP46109 303 aaKnown RBP17.44■□□□□ 0.38
PTBP1-214ENST00000589575 PHACTR3Q96KR7 559 aa17.44■□□□□ 0.38
PTBP1-214ENST00000589575 FCHSD2O94868 740 aa17.43■□□□□ 0.38
PTBP1-214ENST00000589575 DNAJC10Q8IXB1 793 aa17.43■□□□□ 0.38
PTBP1-214ENST00000589575 ARHGEF1Q92888 912 aaKnown RBP17.43■□□□□ 0.38
PTBP1-214ENST00000589575 IL17REQ8NFR9 667 aa17.42■□□□□ 0.38
PTBP1-214ENST00000589575 RTF1Q92541 710 aaKnown RBP17.42■□□□□ 0.38
PTBP1-214ENST00000589575 CD2APQ9Y5K6 639 aa17.41■□□□□ 0.38
PTBP1-214ENST00000589575 MRC1P22897 1456 aa17.41■□□□□ 0.38
PTBP1-214ENST00000589575 MMP10P09238 476 aa17.4■□□□□ 0.38
PTBP1-214ENST00000589575 NLGN1Q8N2Q7 840 aa17.4■□□□□ 0.38
PTBP1-214ENST00000589575 CCDC87Q9NVE4 849 aa17.4■□□□□ 0.38
PTBP1-214ENST00000589575 SCN11AQ9UI33 1791 aa17.39■□□□□ 0.37
PTBP1-214ENST00000589575 RALBP1Q15311 655 aa17.39■□□□□ 0.37
PTBP1-214ENST00000589575 UBR3Q6ZT12 1888 aa17.39■□□□□ 0.37
PTBP1-214ENST00000589575 CYP19A1P11511 503 aaPredicted RBP17.38■□□□□ 0.37
PTBP1-214ENST00000589575 INTS5Q6P9B9 1019 aaKnown RBP17.38■□□□□ 0.37
PTBP1-214ENST00000589575 BTBD11A6QL63 1104 aa17.37■□□□□ 0.37
PTBP1-214ENST00000589575 STARD3NLO95772 234 aa17.37■□□□□ 0.37
PTBP1-214ENST00000589575 GYS1P13807 737 aa17.37■□□□□ 0.37
PTBP1-214ENST00000589575 ZNF790Q6PG37 636 aa17.37■□□□□ 0.37
PTBP1-214ENST00000589575 VSIG10Q8N0Z9 540 aa17.37■□□□□ 0.37
PTBP1-214ENST00000589575 SRP68Q9UHB9 627 aaKnown RBP17.37■□□□□ 0.37
PTBP1-214ENST00000589575 COL24A1Q17RW2 1714 aa17.36■□□□□ 0.37
PTBP1-214ENST00000589575 ZPR1O75312 459 aa17.36■□□□□ 0.37
PTBP1-214ENST00000589575 MCM10Q7L590 875 aa17.36■□□□□ 0.37
PTBP1-214ENST00000589575 PNNQ9H307 717 aaKnown RBP17.36■□□□□ 0.37
PTBP1-214ENST00000589575 PARP3Q9Y6F1 533 aa17.36■□□□□ 0.37
PTBP1-214ENST00000589575 ZNF831Q5JPB2 1677 aa17.36■□□□□ 0.37
PTBP1-214ENST00000589575 CANXP27824 592 aaKnown RBP17.35■□□□□ 0.37
PTBP1-214ENST00000589575 ZNF496Q96IT1 587 aaPredicted RBP17.35■□□□□ 0.37
PTBP1-214ENST00000589575 FMNL2Q96PY5 1086 aa17.35■□□□□ 0.37
PTBP1-214ENST00000589575 WWC3Q9ULE0 1092 aa17.35■□□□□ 0.37
PTBP1-214ENST00000589575 GRIN3BO60391 1043 aa17.34■□□□□ 0.37
PTBP1-214ENST00000589575 ZEB1P37275 1124 aaPredicted RBP17.34■□□□□ 0.37
PTBP1-214ENST00000589575 DCTN1Q14203 1278 aa17.34■□□□□ 0.37
PTBP1-214ENST00000589575 KCPQ6ZWJ8 1503 aa17.34■□□□□ 0.37
PTBP1-214ENST00000589575 CEMIPQ8WUJ3 1361 aa17.34■□□□□ 0.37
PTBP1-214ENST00000589575 USP42Q9H9J4 1324 aaKnown RBP17.34■□□□□ 0.37
PTBP1-214ENST00000589575 MAPK8IP3Q9UPT6 1336 aa17.34■□□□□ 0.37
PTBP1-214ENST00000589575 ZBTB1Q9Y2K1 713 aa17.34■□□□□ 0.37
PTBP1-214ENST00000589575 SOS1Q07889 1333 aaPredicted RBP17.33■□□□□ 0.36
PTBP1-214ENST00000589575 HTATSF1O43719 755 aaKnown RBP17.33■□□□□ 0.36
PTBP1-214ENST00000589575 YBX3P16989 372 aaKnown RBP eCLIP17.33■□□□□ 0.367e-13■□□□□ 9.8
PTBP1-214ENST00000589575 FKBP8Q14318 412 aa17.33■□□□□ 0.36
PTBP1-214ENST00000589575 NPM2Q86SE8 214 aaKnown RBP17.33■□□□□ 0.36
PTBP1-214ENST00000589575 TEX13AQ9BXU3 409 aaPredicted RBP17.33■□□□□ 0.36
PTBP1-214ENST00000589575 ZNF330Q9Y3S2 320 aaPredicted RBP17.33■□□□□ 0.36
PTBP1-214ENST00000589575 COL5A3P25940 1745 aaPredicted RBP17.33■□□□□ 0.36
PTBP1-214ENST00000589575 ADAMTS7Q9UKP4 1686 aa17.32■□□□□ 0.36
PTBP1-214ENST00000589575 HEG1Q9ULI3 1381 aa17.32■□□□□ 0.36
PTBP1-214ENST00000589575 USPL1Q5W0Q7 1092 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms