RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 RRP7AQ9Y3A4 280 aaKnown RBP25.69■■□□□ 1.7
CIRBP-220ENST00000588917 CEMIPQ8WUJ3 1361 aa25.69■■□□□ 1.7
CIRBP-220ENST00000588917 MCM10Q7L590 875 aa25.68■■□□□ 1.7
CIRBP-220ENST00000588917 SMARCC1Q92922 1105 aaPredicted RBP25.68■■□□□ 1.7
CIRBP-220ENST00000588917 SBF2Q86WG5 1849 aa25.66■■□□□ 1.7
CIRBP-220ENST00000588917 HMGB2P26583 209 aaKnown RBP25.66■■□□□ 1.7
CIRBP-220ENST00000588917 CCDC27Q2M243 656 aa25.66■■□□□ 1.7
CIRBP-220ENST00000588917 NHSQ6T4R5 1651 aa25.66■■□□□ 1.7
CIRBP-220ENST00000588917 CALD1Q05682 793 aaKnown RBP25.65■■□□□ 1.7
CIRBP-220ENST00000588917 DCTN1Q14203 1278 aa25.65■■□□□ 1.7
CIRBP-220ENST00000588917 TAF7Q15545 349 aaPredicted RBP25.65■■□□□ 1.7
CIRBP-220ENST00000588917 DOT1LQ8TEK3 1739 aa25.64■■□□□ 1.7
CIRBP-220ENST00000588917 TRIM35Q9UPQ4 493 aa25.64■■□□□ 1.7
CIRBP-220ENST00000588917 PROM2Q8N271 834 aa25.63■■□□□ 1.69
CIRBP-220ENST00000588917 PPP1R1BQ9UD71 204 aaPredicted RBP25.63■■□□□ 1.69
CIRBP-220ENST00000588917 SCN11AQ9UI33 1791 aa25.62■■□□□ 1.69
CIRBP-220ENST00000588917 ADAMTS7Q9UKP4 1686 aa25.62■■□□□ 1.69
CIRBP-220ENST00000588917 BTBD11A6QL63 1104 aa25.61■■□□□ 1.69
CIRBP-220ENST00000588917 ANO8Q9HCE9 1232 aaPredicted RBP25.61■■□□□ 1.69
CIRBP-220ENST00000588917 BABAM1Q9NWV8 329 aa25.61■■□□□ 1.69
CIRBP-220ENST00000588917 RGPD3A6NKT7 1758 aaPredicted RBP25.61■■□□□ 1.69
CIRBP-220ENST00000588917 RGPD4Q7Z3J3 1758 aa25.61■■□□□ 1.69
CIRBP-220ENST00000588917 KAT6BQ8WYB5 2073 aa25.6■■□□□ 1.69
CIRBP-220ENST00000588917 ATG3Q9NT62 314 aa25.6■■□□□ 1.69
CIRBP-220ENST00000588917 TOGARAM1Q9Y4F4 1720 aa25.6■■□□□ 1.69
CIRBP-220ENST00000588917 ASAP1Q9ULH1 1129 aa25.59■■□□□ 1.69
CIRBP-220ENST00000588917 MRC1P22897 1456 aa25.59■■□□□ 1.69
CIRBP-220ENST00000588917 TXNRD1Q16881 649 aa25.58■■□□□ 1.69
CIRBP-220ENST00000588917 TTC5Q8N0Z6 440 aa25.58■■□□□ 1.69
CIRBP-220ENST00000588917 SLC27A3Q5K4L6 730 aa25.57■■□□□ 1.68
CIRBP-220ENST00000588917 WWC1Q8IX03 1113 aa25.57■■□□□ 1.68
CIRBP-220ENST00000588917 ITGB4P16144 1822 aa25.57■■□□□ 1.68
CIRBP-220ENST00000588917 DLG5Q8TDM6 1919 aa25.57■■□□□ 1.68
CIRBP-220ENST00000588917 ZNF790Q6PG37 636 aa25.56■■□□□ 1.68
CIRBP-220ENST00000588917 THUMPD2Q9BTF0 503 aaKnown RBP25.56■■□□□ 1.68
CIRBP-220ENST00000588917 PALLDQ8WX93 1383 aa25.56■■□□□ 1.68
CIRBP-220ENST00000588917 WDR63Q8IWG1 891 aa25.55■■□□□ 1.68
CIRBP-220ENST00000588917 SALL2Q9Y467 1007 aaPredicted RBP25.55■■□□□ 1.68
CIRBP-220ENST00000588917 BTAF1O14981 1849 aa25.54■■□□□ 1.68
CIRBP-220ENST00000588917 STK32BQ9NY57 414 aa25.54■■□□□ 1.68
CIRBP-220ENST00000588917 GNAI1P63096 354 aa25.53■■□□□ 1.68
CIRBP-220ENST00000588917 CFAP44Q96MT7 982 aa25.53■■□□□ 1.68
CIRBP-220ENST00000588917 LOC102724428A0A0B4J2F2 783 aa25.52■■□□□ 1.68
CIRBP-220ENST00000588917 DCAF8L1A6NGE4 600 aa25.52■■□□□ 1.68
CIRBP-220ENST00000588917 SIK1P57059 783 aa25.52■■□□□ 1.68
CIRBP-220ENST00000588917 SLC39A6Q13433 755 aa25.52■■□□□ 1.68
CIRBP-220ENST00000588917 RBM42Q9BTD8 480 aaKnown RBP25.52■■□□□ 1.68
CIRBP-220ENST00000588917 PDGFDQ9GZP0 370 aaPredicted RBP25.52■■□□□ 1.68
CIRBP-220ENST00000588917 CCNL1Q9UK58 526 aaPredicted RBP25.52■■□□□ 1.68
CIRBP-220ENST00000588917 PTCD1O75127 700 aaKnown RBP25.51■■□□□ 1.67
CIRBP-220ENST00000588917 SLC15A2Q16348 729 aa25.51■■□□□ 1.67
CIRBP-220ENST00000588917 VSIG10Q8N0Z9 540 aa25.51■■□□□ 1.67
CIRBP-220ENST00000588917 IFT57Q9NWB7 429 aa25.51■■□□□ 1.67
CIRBP-220ENST00000588917 TSPYL4Q9UJ04 414 aa25.51■■□□□ 1.67
CIRBP-220ENST00000588917 IL16Q14005 1332 aa25.51■■□□□ 1.67
CIRBP-220ENST00000588917 SENP3-EIF4A1A0A087X0R7 540 aa25.5■■□□□ 1.67
CIRBP-220ENST00000588917 CHL1O00533 1208 aa25.5■■□□□ 1.67
CIRBP-220ENST00000588917 ZBTB7AO95365 584 aa25.5■■□□□ 1.67
CIRBP-220ENST00000588917 FMNL2Q96PY5 1086 aa25.5■■□□□ 1.67
CIRBP-220ENST00000588917 LAS1LQ9Y4W2 734 aaKnown RBP25.5■■□□□ 1.67
CIRBP-220ENST00000588917 VIRMAQ69YN4 1812 aaKnown RBP25.49■■□□□ 1.67
CIRBP-220ENST00000588917 ATP6V1AP38606 617 aa25.49■■□□□ 1.67
CIRBP-220ENST00000588917 MIS18AQ9NYP9 233 aa25.49■■□□□ 1.67
CIRBP-220ENST00000588917 TEX13AQ9BXU3 409 aaPredicted RBP25.48■■□□□ 1.67
CIRBP-220ENST00000588917 YY1P25490 414 aa25.47■■□□□ 1.67
CIRBP-220ENST00000588917 SIPA1L3O60292 1781 aaPredicted RBP25.46■■□□□ 1.67
CIRBP-220ENST00000588917 ZNF853P0CG23 659 aa25.46■■□□□ 1.67
CIRBP-220ENST00000588917 ATF5Q9Y2D1 282 aaPredicted RBP25.46■■□□□ 1.67
CIRBP-220ENST00000588917 PTGER2P43116 358 aa25.45■■□□□ 1.66
CIRBP-220ENST00000588917 HNRNPUQ00839 825 aaKnown RBP eCLIP25.45■■□□□ 1.66
CIRBP-220ENST00000588917 ZNF496Q96IT1 587 aaPredicted RBP25.45■■□□□ 1.66
CIRBP-220ENST00000588917 CASZ1Q86V15 1759 aa25.45■■□□□ 1.66
CIRBP-220ENST00000588917 KCNQ3O43525 872 aa25.44■■□□□ 1.66
CIRBP-220ENST00000588917 LRRC4BQ9NT99 713 aa25.44■■□□□ 1.66
CIRBP-220ENST00000588917 SNRPA1P09661 255 aaKnown RBP25.43■■□□□ 1.66
CIRBP-220ENST00000588917 EIF4A1P60842 406 aaKnown RBP25.43■■□□□ 1.66
CIRBP-220ENST00000588917 GOLGA2Q08379 1002 aa25.43■■□□□ 1.66
CIRBP-220ENST00000588917 HEG1Q9ULI3 1381 aa25.43■■□□□ 1.66
CIRBP-220ENST00000588917 ZNF521Q96K83 1311 aa25.42■■□□□ 1.66
CIRBP-220ENST00000588917 MTFR1LQ9H019 292 aa25.42■■□□□ 1.66
CIRBP-220ENST00000588917 LY75O60449 1722 aa25.42■■□□□ 1.66
CIRBP-220ENST00000588917 STARD3NLO95772 234 aa25.41■■□□□ 1.66
CIRBP-220ENST00000588917 SLC4A9Q96Q91 983 aa25.41■■□□□ 1.66
CIRBP-220ENST00000588917 MYH16Q9H6N6 1097 aa25.41■■□□□ 1.66
CIRBP-220ENST00000588917 MBIPQ9NS73 344 aa25.41■■□□□ 1.66
CIRBP-220ENST00000588917 PAPPAQ13219 1627 aa25.41■■□□□ 1.66
CIRBP-220ENST00000588917 KCNQ4P56696 695 aa25.39■■□□□ 1.66
CIRBP-220ENST00000588917 CHMP4AQ9BY43 222 aa25.39■■□□□ 1.66
CIRBP-220ENST00000588917 KCPQ6ZWJ8 1503 aa25.38■■□□□ 1.65
CIRBP-220ENST00000588917 ITPK1Q13572 414 aa25.38■■□□□ 1.65
CIRBP-220ENST00000588917 RC3H1Q5TC82 1133 aaKnown RBP25.38■■□□□ 1.65
CIRBP-220ENST00000588917 ZNF831Q5JPB2 1677 aa25.38■■□□□ 1.65
CIRBP-220ENST00000588917 E9PSI1 815 aa25.37■■□□□ 1.65
CIRBP-220ENST00000588917 GIGYF1O75420 1035 aaPredicted RBP25.37■■□□□ 1.65
CIRBP-220ENST00000588917 DNAJC10Q8IXB1 793 aa25.37■■□□□ 1.65
CIRBP-220ENST00000588917 HOXB7P09629 217 aa25.35■■□□□ 1.65
CIRBP-220ENST00000588917 LINC00116Q8NCU8 138 aa25.35■■□□□ 1.65
CIRBP-220ENST00000588917 SGIP1Q9BQI5 828 aa25.35■■□□□ 1.65
CIRBP-220ENST00000588917 UBR2Q8IWV8 1755 aa25.35■■□□□ 1.65
CIRBP-220ENST00000588917 SOS1Q07889 1333 aaPredicted RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms