RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 PAPPAQ13219 1627 aa11.89□□□□□ -0.51
SDF2-207ENST00000588472 PNPLA7Q6ZV29 1317 aa11.88□□□□□ -0.51
SDF2-207ENST00000588472 LOC102724428A0A0B4J2F2 783 aa11.88□□□□□ -0.51
SDF2-207ENST00000588472 ATP6V1AP38606 617 aa11.88□□□□□ -0.51
SDF2-207ENST00000588472 SIK1P57059 783 aa11.88□□□□□ -0.51
SDF2-207ENST00000588472 MTHFSDQ2M296 383 aaKnown RBP11.88□□□□□ -0.51
SDF2-207ENST00000588472 PELP1Q8IZL8 1130 aaKnown RBP11.88□□□□□ -0.51
SDF2-207ENST00000588472 KLHL34Q8N239 644 aa11.88□□□□□ -0.51
SDF2-207ENST00000588472 NFATC2IPQ8NCF5 419 aa11.88□□□□□ -0.51
SDF2-207ENST00000588472 AK7Q96M32 723 aa11.88□□□□□ -0.51
SDF2-207ENST00000588472 KDRP35968 1356 aa11.88□□□□□ -0.51
SDF2-207ENST00000588472 PHF14O94880 888 aa11.87□□□□□ -0.51
SDF2-207ENST00000588472 POLD1P28340 1107 aa11.87□□□□□ -0.51
SDF2-207ENST00000588472 AKAP4Q5JQC9 854 aa11.87□□□□□ -0.51
SDF2-207ENST00000588472 COL23A1Q86Y22 540 aaPredicted RBP11.87□□□□□ -0.51
SDF2-207ENST00000588472 LGR6Q9HBX8 967 aa11.87□□□□□ -0.51
SDF2-207ENST00000588472 KDM6AO15550 1401 aaPredicted RBP11.86□□□□□ -0.51
SDF2-207ENST00000588472 PTCD1O75127 700 aaKnown RBP11.86□□□□□ -0.51
SDF2-207ENST00000588472 U2AF1L5P0DN76 240 aaPredicted RBP11.86□□□□□ -0.51
SDF2-207ENST00000588472 U2AF1Q01081 240 aaKnown RBP eCLIP11.86□□□□□ -0.51
SDF2-207ENST00000588472 ITPK1Q13572 414 aa11.86□□□□□ -0.51
SDF2-207ENST00000588472 MSL1Q68DK7 614 aa11.86□□□□□ -0.51
SDF2-207ENST00000588472 LINC00116Q8NCU8 138 aa11.86□□□□□ -0.51
SDF2-207ENST00000588472 NUDCQ9Y266 331 aa11.86□□□□□ -0.51
SDF2-207ENST00000588472 COL3A1P02461 1466 aaPredicted RBP11.85□□□□□ -0.51
SDF2-207ENST00000588472 PLEKHG2Q9H7P9 1386 aa11.85□□□□□ -0.51
SDF2-207ENST00000588472 SLC16A10Q8TF71 515 aa11.85□□□□□ -0.51
SDF2-207ENST00000588472 C5P01031 1676 aa11.84□□□□□ -0.51
SDF2-207ENST00000588472 RNMTO43148 476 aaKnown RBP11.84□□□□□ -0.51
SDF2-207ENST00000588472 PRKAR2BP31323 418 aa11.84□□□□□ -0.51
SDF2-207ENST00000588472 AMIGO3Q86WK7 504 aa11.84□□□□□ -0.51
SDF2-207ENST00000588472 CHD4Q14839 1912 aa11.84□□□□□ -0.51
SDF2-207ENST00000588472 TUBGCP6Q96RT7 1819 aa11.83□□□□□ -0.51
SDF2-207ENST00000588472 GNPATO15228 680 aa11.83□□□□□ -0.52
SDF2-207ENST00000588472 HMGB2P26583 209 aaKnown RBP11.83□□□□□ -0.52
SDF2-207ENST00000588472 SLC39A6Q13433 755 aa11.83□□□□□ -0.52
SDF2-207ENST00000588472 PHACTR3Q96KR7 559 aa11.83□□□□□ -0.52
SDF2-207ENST00000588472 SLC4A9Q96Q91 983 aa11.83□□□□□ -0.52
SDF2-207ENST00000588472 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
SDF2-207ENST00000588472 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.82□□□□□ -0.52
SDF2-207ENST00000588472 FLAD1Q8NFF5 587 aa11.82□□□□□ -0.52
SDF2-207ENST00000588472 GAS2L2Q8NHY3 880 aa11.82□□□□□ -0.52
SDF2-207ENST00000588472 RSPH6AQ9H0K4 717 aa11.82□□□□□ -0.52
SDF2-207ENST00000588472 SLC52A2Q9HAB3 445 aa11.82□□□□□ -0.52
SDF2-207ENST00000588472 TAF1LQ8IZX4 1826 aa11.81□□□□□ -0.52
SDF2-207ENST00000588472 GNAT3A8MTJ3 354 aa11.81□□□□□ -0.52
SDF2-207ENST00000588472 GRIN3BO60391 1043 aa11.81□□□□□ -0.52
SDF2-207ENST00000588472 ZEB1P37275 1124 aaPredicted RBP11.81□□□□□ -0.52
SDF2-207ENST00000588472 TEFQ10587 303 aa11.8□□□□□ -0.52
SDF2-207ENST00000588472 RTCBQ9Y3I0 505 aaKnown RBP11.8□□□□□ -0.52
SDF2-207ENST00000588472 QSER1Q2KHR3 1735 aa11.8□□□□□ -0.52
SDF2-207ENST00000588472 SCN11AQ9UI33 1791 aa11.79□□□□□ -0.52
SDF2-207ENST00000588472 IL17REQ8NFR9 667 aa11.79□□□□□ -0.52
SDF2-207ENST00000588472 NLGN2Q8NFZ4 835 aa11.79□□□□□ -0.52
SDF2-207ENST00000588472 FCHSD2O94868 740 aa11.78□□□□□ -0.52
SDF2-207ENST00000588472 SSFA2P28290 1259 aa11.78□□□□□ -0.52
SDF2-207ENST00000588472 RALBP1Q15311 655 aa11.78□□□□□ -0.52
SDF2-207ENST00000588472 TRAPPC3LQ5T215 181 aa11.78□□□□□ -0.52
SDF2-207ENST00000588472 NEFMP07197 916 aa11.77□□□□□ -0.53
SDF2-207ENST00000588472 CRKLP46109 303 aaKnown RBP11.77□□□□□ -0.53
SDF2-207ENST00000588472 DCTN1Q14203 1278 aa11.77□□□□□ -0.53
SDF2-207ENST00000588472 MCM10Q7L590 875 aa11.77□□□□□ -0.53
SDF2-207ENST00000588472 DNAJC10Q8IXB1 793 aa11.77□□□□□ -0.53
SDF2-207ENST00000588472 TTC5Q8N0Z6 440 aa11.77□□□□□ -0.53
SDF2-207ENST00000588472 RTF1Q92541 710 aaKnown RBP11.77□□□□□ -0.53
SDF2-207ENST00000588472 YBX3P16989 372 aaKnown RBP eCLIP11.76□□□□□ -0.531e-6■□□□□ 8.7
SDF2-207ENST00000588472 RFC4P35249 363 aa11.76□□□□□ -0.53
SDF2-207ENST00000588472 RC3H1Q5TC82 1133 aaKnown RBP11.76□□□□□ -0.53
SDF2-207ENST00000588472 ARHGEF1Q92888 912 aaKnown RBP11.76□□□□□ -0.53
SDF2-207ENST00000588472 VIRMAQ69YN4 1812 aaKnown RBP11.76□□□□□ -0.53
SDF2-207ENST00000588472 GOLGB1Q14789 3259 aaKnown RBP11.76□□□□□ -0.53
SDF2-207ENST00000588472 UBR3Q6ZT12 1888 aa11.76□□□□□ -0.53
SDF2-207ENST00000588472 BTBD11A6QL63 1104 aa11.75□□□□□ -0.53
SDF2-207ENST00000588472 RPS6KA4O75676 772 aa11.75□□□□□ -0.53
SDF2-207ENST00000588472 GPBP1L1Q9HC44 474 aaPredicted RBP11.75□□□□□ -0.53
SDF2-207ENST00000588472 CNTNAP4Q9C0A0 1308 aa11.75□□□□□ -0.53
SDF2-207ENST00000588472 ATP10DQ9P241 1426 aa11.75□□□□□ -0.53
SDF2-207ENST00000588472 KCNQ3O43525 872 aa11.74□□□□□ -0.53
SDF2-207ENST00000588472 INTS5Q6P9B9 1019 aaKnown RBP11.74□□□□□ -0.53
SDF2-207ENST00000588472 MMP10P09238 476 aa11.73□□□□□ -0.53
SDF2-207ENST00000588472 CYP19A1P11511 503 aaPredicted RBP11.73□□□□□ -0.53
SDF2-207ENST00000588472 HSPA6P17066 643 aa11.73□□□□□ -0.53
SDF2-207ENST00000588472 MRC1P22897 1456 aa11.73□□□□□ -0.53
SDF2-207ENST00000588472 CANXP27824 592 aaKnown RBP11.73□□□□□ -0.53
SDF2-207ENST00000588472 ZNF790Q6PG37 636 aa11.73□□□□□ -0.53
SDF2-207ENST00000588472 ZNF496Q96IT1 587 aaPredicted RBP11.73□□□□□ -0.53
SDF2-207ENST00000588472 MYBBP1AQ9BQG0 1328 aaKnown RBP11.73□□□□□ -0.53
SDF2-207ENST00000588472 CCDC87Q9NVE4 849 aa11.73□□□□□ -0.53
SDF2-207ENST00000588472 SRP68Q9UHB9 627 aaKnown RBP11.73□□□□□ -0.53
SDF2-207ENST00000588472 WWC3Q9ULE0 1092 aa11.73□□□□□ -0.53
SDF2-207ENST00000588472 MAPK8IP3Q9UPT6 1336 aa11.73□□□□□ -0.53
SDF2-207ENST00000588472 PNNQ9H307 717 aaKnown RBP11.72□□□□□ -0.53
SDF2-207ENST00000588472 MIS18AQ9NYP9 233 aa11.72□□□□□ -0.53
SDF2-207ENST00000588472 ZNF330Q9Y3S2 320 aaPredicted RBP11.72□□□□□ -0.53
SDF2-207ENST00000588472 COL5A3P25940 1745 aaPredicted RBP11.72□□□□□ -0.53
SDF2-207ENST00000588472 TJP1Q07157 1748 aa11.72□□□□□ -0.53
SDF2-207ENST00000588472 ZNF831Q5JPB2 1677 aa11.71□□□□□ -0.53
SDF2-207ENST00000588472 KCPQ6ZWJ8 1503 aa11.71□□□□□ -0.53
SDF2-207ENST00000588472 MYH14Q7Z406 1995 aaKnown RBP11.71□□□□□ -0.53
SDF2-207ENST00000588472 STARD3NLO95772 234 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms