RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 U2AF1L5P0DN76 240 aaPredicted RBP25.69■■□□□ 1.7
CIRBP-217ENST00000588230 U2AF1Q01081 240 aaKnown RBP eCLIP25.69■■□□□ 1.7
CIRBP-217ENST00000588230 AKAP4Q5JQC9 854 aa25.69■■□□□ 1.7
CIRBP-217ENST00000588230 UBR3Q6ZT12 1888 aa25.68■■□□□ 1.7
CIRBP-217ENST00000588230 CABP4P57796 275 aa25.68■■□□□ 1.7
CIRBP-217ENST00000588230 ITPK1Q13572 414 aa25.68■■□□□ 1.7
CIRBP-217ENST00000588230 MTHFSDQ2M296 383 aaKnown RBP25.68■■□□□ 1.7
CIRBP-217ENST00000588230 LINC00116Q8NCU8 138 aa25.68■■□□□ 1.7
CIRBP-217ENST00000588230 ZNF831Q5JPB2 1677 aa25.68■■□□□ 1.7
CIRBP-217ENST00000588230 SCN11AQ9UI33 1791 aa25.67■■□□□ 1.7
CIRBP-217ENST00000588230 SLC4A9Q96Q91 983 aa25.66■■□□□ 1.7
CIRBP-217ENST00000588230 FHDC1Q9C0D6 1143 aaPredicted RBP25.66■■□□□ 1.7
CIRBP-217ENST00000588230 MAP3K5Q99683 1374 aa25.66■■□□□ 1.7
CIRBP-217ENST00000588230 ADAMTS7Q9UKP4 1686 aa25.65■■□□□ 1.7
CIRBP-217ENST00000588230 HMGB2P26583 209 aaKnown RBP25.65■■□□□ 1.7
CIRBP-217ENST00000588230 ARXQ96QS3 562 aa25.65■■□□□ 1.7
CIRBP-217ENST00000588230 UTRNP46939 3433 aa25.65■■□□□ 1.7
CIRBP-217ENST00000588230 PRKAR2BP31323 418 aa25.64■■□□□ 1.7
CIRBP-217ENST00000588230 SYT17Q9BSW7 474 aa25.64■■□□□ 1.7
CIRBP-217ENST00000588230 RSPH6AQ9H0K4 717 aa25.64■■□□□ 1.7
CIRBP-217ENST00000588230 MRC1P22897 1456 aa25.64■■□□□ 1.69
CIRBP-217ENST00000588230 ZNF316A6NFI3 1004 aaPredicted RBP25.63■■□□□ 1.69
CIRBP-217ENST00000588230 GAS2L2Q8NHY3 880 aa25.63■■□□□ 1.69
CIRBP-217ENST00000588230 FCHSD2O94868 740 aa25.62■■□□□ 1.69
CIRBP-217ENST00000588230 COL5A3P25940 1745 aaPredicted RBP25.62■■□□□ 1.69
CIRBP-217ENST00000588230 ATP6V1AP38606 617 aa25.61■■□□□ 1.69
CIRBP-217ENST00000588230 SMIM5Q71RC9 77 aa25.61■■□□□ 1.69
CIRBP-217ENST00000588230 NFATC2IPQ8NCF5 419 aa25.61■■□□□ 1.69
CIRBP-217ENST00000588230 RNMTO43148 476 aaKnown RBP25.6■■□□□ 1.69
CIRBP-217ENST00000588230 AK7Q96M32 723 aa25.6■■□□□ 1.69
CIRBP-217ENST00000588230 LGR6Q9HBX8 967 aa25.6■■□□□ 1.69
CIRBP-217ENST00000588230 MYBBP1AQ9BQG0 1328 aaKnown RBP25.6■■□□□ 1.69
CIRBP-217ENST00000588230 VIRMAQ69YN4 1812 aaKnown RBP25.59■■□□□ 1.69
CIRBP-217ENST00000588230 FLAD1Q8NFF5 587 aa25.59■■□□□ 1.69
CIRBP-217ENST00000588230 PHACTR3Q96KR7 559 aa25.59■■□□□ 1.69
CIRBP-217ENST00000588230 CICQ96RK0 1608 aaPredicted RBP25.59■■□□□ 1.69
CIRBP-217ENST00000588230 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.57■■□□□ 1.68
CIRBP-217ENST00000588230 GNAT3A8MTJ3 354 aa25.57■■□□□ 1.68
CIRBP-217ENST00000588230 MSH5O43196 834 aa25.57■■□□□ 1.68
CIRBP-217ENST00000588230 POLD1P28340 1107 aa25.57■■□□□ 1.68
CIRBP-217ENST00000588230 MSL1Q68DK7 614 aa25.57■■□□□ 1.68
CIRBP-217ENST00000588230 SLC52A2Q9HAB3 445 aa25.57■■□□□ 1.68
CIRBP-217ENST00000588230 SSFA2P28290 1259 aa25.56■■□□□ 1.68
CIRBP-217ENST00000588230 RBM42Q9BTD8 480 aaKnown RBP25.56■■□□□ 1.68
CIRBP-217ENST00000588230 TJP1Q07157 1748 aa25.55■■□□□ 1.68
CIRBP-217ENST00000588230 GOLGB1Q14789 3259 aaKnown RBP25.55■■□□□ 1.68
CIRBP-217ENST00000588230 NEFMP07197 916 aa25.55■■□□□ 1.68
CIRBP-217ENST00000588230 PRKRIP1Q9H875 184 aaPredicted RBP25.55■■□□□ 1.68
CIRBP-217ENST00000588230 PHF14O94880 888 aa25.54■■□□□ 1.68
CIRBP-217ENST00000588230 MYH14Q7Z406 1995 aaKnown RBP25.54■■□□□ 1.68
CIRBP-217ENST00000588230 GNPATO15228 680 aa25.53■■□□□ 1.68
CIRBP-217ENST00000588230 CNTNAP4Q9C0A0 1308 aa25.52■■□□□ 1.68
CIRBP-217ENST00000588230 PTCD1O75127 700 aaKnown RBP25.51■■□□□ 1.67
CIRBP-217ENST00000588230 PNNQ9H307 717 aaKnown RBP25.51■■□□□ 1.67
CIRBP-217ENST00000588230 KCPQ6ZWJ8 1503 aa25.51■■□□□ 1.67
CIRBP-217ENST00000588230 TEFQ10587 303 aa25.5■■□□□ 1.67
CIRBP-217ENST00000588230 RC3H1Q5TC82 1133 aaKnown RBP25.5■■□□□ 1.67
CIRBP-217ENST00000588230 IL17REQ8NFR9 667 aa25.5■■□□□ 1.67
CIRBP-217ENST00000588230 NLGN2Q8NFZ4 835 aa25.48■■□□□ 1.67
CIRBP-217ENST00000588230 RTF1Q92541 710 aaKnown RBP25.48■■□□□ 1.67
CIRBP-217ENST00000588230 SIPA1L3O60292 1781 aaPredicted RBP25.47■■□□□ 1.67
CIRBP-217ENST00000588230 UBR2Q8IWV8 1755 aa25.47■■□□□ 1.67
CIRBP-217ENST00000588230 SLC39A6Q13433 755 aa25.46■■□□□ 1.67
CIRBP-217ENST00000588230 C4AP0C0L4 1744 aa25.46■■□□□ 1.67
CIRBP-217ENST00000588230 MAPK8IP3Q9UPT6 1336 aa25.45■■□□□ 1.66
CIRBP-217ENST00000588230 PLEKHF1Q96S99 279 aa25.45■■□□□ 1.66
CIRBP-217ENST00000588230 RTCBQ9Y3I0 505 aaKnown RBP25.45■■□□□ 1.66
CIRBP-217ENST00000588230 CEMIPQ8WUJ3 1361 aa25.44■■□□□ 1.66
CIRBP-217ENST00000588230 RPS6KA4O75676 772 aa25.44■■□□□ 1.66
CIRBP-217ENST00000588230 KLHL34Q8N239 644 aa25.44■■□□□ 1.66
CIRBP-217ENST00000588230 HTATSF1O43719 755 aaKnown RBP25.43■■□□□ 1.66
CIRBP-217ENST00000588230 CRKLP46109 303 aaKnown RBP25.43■■□□□ 1.66
CIRBP-217ENST00000588230 WDR43Q15061 677 aaKnown RBP eCLIP25.43■■□□□ 1.66
CIRBP-217ENST00000588230 DCAF8L1A6NGE4 600 aa25.42■■□□□ 1.66
CIRBP-217ENST00000588230 ADRA2BP18089 450 aa25.42■■□□□ 1.66
CIRBP-217ENST00000588230 DNAJC10Q8IXB1 793 aa25.42■■□□□ 1.66
CIRBP-217ENST00000588230 TTC5Q8N0Z6 440 aa25.42■■□□□ 1.66
CIRBP-217ENST00000588230 ARHGEF1Q92888 912 aaKnown RBP25.42■■□□□ 1.66
CIRBP-217ENST00000588230 TRAPPC3LQ5T215 181 aa25.41■■□□□ 1.66
CIRBP-217ENST00000588230 INTS5Q6P9B9 1019 aaKnown RBP25.41■■□□□ 1.66
CIRBP-217ENST00000588230 MCM10Q7L590 875 aa25.41■■□□□ 1.66
CIRBP-217ENST00000588230 NFE2L2Q16236 605 aa25.4■■□□□ 1.66
CIRBP-217ENST00000588230 DCTN1Q14203 1278 aa25.39■■□□□ 1.66
CIRBP-217ENST00000588230 CD2APQ9Y5K6 639 aa25.39■■□□□ 1.66
CIRBP-217ENST00000588230 YY1P25490 414 aa25.38■■□□□ 1.65
CIRBP-217ENST00000588230 BTBD11A6QL63 1104 aa25.37■■□□□ 1.65
CIRBP-217ENST00000588230 CYP19A1P11511 503 aaPredicted RBP25.37■■□□□ 1.65
CIRBP-217ENST00000588230 GYS1P13807 737 aa25.37■■□□□ 1.65
CIRBP-217ENST00000588230 ZNF790Q6PG37 636 aa25.37■■□□□ 1.65
CIRBP-217ENST00000588230 VSIG10Q8N0Z9 540 aa25.36■■□□□ 1.65
CIRBP-217ENST00000588230 ANP32CO43423 234 aa25.35■■□□□ 1.65
CIRBP-217ENST00000588230 MMP10P09238 476 aa25.35■■□□□ 1.65
CIRBP-217ENST00000588230 CCDC87Q9NVE4 849 aa25.35■■□□□ 1.65
CIRBP-217ENST00000588230 ZNF496Q96IT1 587 aaPredicted RBP25.34■■□□□ 1.65
CIRBP-217ENST00000588230 ADAMTS8Q9UP79 889 aa25.34■■□□□ 1.65
CIRBP-217ENST00000588230 SOS1Q07889 1333 aaPredicted RBP25.34■■□□□ 1.65
CIRBP-217ENST00000588230 USP42Q9H9J4 1324 aaKnown RBP25.34■■□□□ 1.65
CIRBP-217ENST00000588230 KIF13BQ9NQT8 1826 aa25.33■■□□□ 1.65
CIRBP-217ENST00000588230 YBX3P16989 372 aaKnown RBP eCLIP25.33■■□□□ 1.65
CIRBP-217ENST00000588230 RFC4P35249 363 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms