RNA–Protein interactions for RNA: ENST00000588162.1

TXNL4A-208, Transcript of thioredoxin like 4A, human

TSL 2 BASIC

Gene TXNL4A, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TXNL4A-208	ENST00000588162	SYT17	Q9BSW7	474 aa		33.43	■■■□□ 2.94
TXNL4A-208	ENST00000588162	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33.43	■■■□□ 2.94
TXNL4A-208	ENST00000588162	MPRIP	Q6WCQ1	1025 aa		33.42	■■■□□ 2.94
TXNL4A-208	ENST00000588162	MTFR1L	Q9H019	292 aa		33.42	■■■□□ 2.94
TXNL4A-208	ENST00000588162	LMOD3	Q0VAK6	560 aa		33.41	■■■□□ 2.94
TXNL4A-208	ENST00000588162	VIRMA	Q69YN4	1812 aa	Known RBP	33.4	■■■□□ 2.94
TXNL4A-208	ENST00000588162	SCN11A	Q9UI33	1791 aa		33.39	■■■□□ 2.94
TXNL4A-208	ENST00000588162	ERVV-2	B6SEH9	535 aa		33.39	■■■□□ 2.94
TXNL4A-208	ENST00000588162	NEUROD2	Q15784	382 aa		33.39	■■■□□ 2.94
TXNL4A-208	ENST00000588162	SGIP1	Q9BQI5	828 aa		33.38	■■■□□ 2.93
TXNL4A-208	ENST00000588162	RRP7A	Q9Y3A4	280 aa	Known RBP	33.38	■■■□□ 2.93
TXNL4A-208	ENST00000588162	DOT1L	Q8TEK3	1739 aa		33.38	■■■□□ 2.93
TXNL4A-208	ENST00000588162	RNMT	O43148	476 aa	Known RBP	33.37	■■■□□ 2.93
TXNL4A-208	ENST00000588162	ACSBG1	Q96GR2	724 aa		33.36	■■■□□ 2.93
TXNL4A-208	ENST00000588162	LGR6	Q9HBX8	967 aa		33.35	■■■□□ 2.93
TXNL4A-208	ENST00000588162	KDM6A	O15550	1401 aa	Predicted RBP	33.35	■■■□□ 2.93
TXNL4A-208	ENST00000588162	PRIM1	P49642	420 aa	Known RBP	33.34	■■■□□ 2.93
TXNL4A-208	ENST00000588162	CABP4	P57796	275 aa		33.34	■■■□□ 2.93
TXNL4A-208	ENST00000588162	NCBP3	Q53F19	620 aa	Known RBP	33.34	■■■□□ 2.93
TXNL4A-208	ENST00000588162	NGEF	Q8N5V2	710 aa		33.34	■■■□□ 2.93
TXNL4A-208	ENST00000588162	SYTL4	Q96C24	671 aa	Predicted RBP	33.34	■■■□□ 2.93
TXNL4A-208	ENST00000588162	NHS	Q6T4R5	1651 aa		33.33	■■■□□ 2.93
TXNL4A-208	ENST00000588162	ADAMTS7	Q9UKP4	1686 aa		33.33	■■■□□ 2.93
TXNL4A-208	ENST00000588162	ITGB4	P16144	1822 aa		33.33	■■■□□ 2.93
TXNL4A-208	ENST00000588162	IL17RE	Q8NFR9	667 aa		33.33	■■■□□ 2.93
TXNL4A-208	ENST00000588162	TOGARAM1	Q9Y4F4	1720 aa		33.33	■■■□□ 2.93
TXNL4A-208	ENST00000588162	UTRN	P46939	3433 aa		33.33	■■■□□ 2.93
TXNL4A-208	ENST00000588162	TMOD3	Q9NYL9	352 aa		33.32	■■■□□ 2.92
TXNL4A-208	ENST00000588162	TEF	Q10587	303 aa		33.31	■■■□□ 2.92
TXNL4A-208	ENST00000588162	MCM10	Q7L590	875 aa		33.31	■■■□□ 2.92
TXNL4A-208	ENST00000588162	ARX	Q96QS3	562 aa		33.3	■■■□□ 2.92
TXNL4A-208	ENST00000588162	DCTN1	Q14203	1278 aa		33.28	■■■□□ 2.92
TXNL4A-208	ENST00000588162	SLC52A2	Q9HAB3	445 aa		33.28	■■■□□ 2.92
TXNL4A-208	ENST00000588162	CEMIP	Q8WUJ3	1361 aa		33.28	■■■□□ 2.92
TXNL4A-208	ENST00000588162	CCDC27	Q2M243	656 aa		33.27	■■■□□ 2.92
TXNL4A-208	ENST00000588162	NFATC2IP	Q8NCF5	419 aa		33.27	■■■□□ 2.92
TXNL4A-208	ENST00000588162	TRIM35	Q9UPQ4	493 aa		33.27	■■■□□ 2.92
TXNL4A-208	ENST00000588162	CALD1	Q05682	793 aa	Known RBP	33.24	■■■□□ 2.91
TXNL4A-208	ENST00000588162	MRC1	P22897	1456 aa		33.24	■■■□□ 2.91
TXNL4A-208	ENST00000588162	PAPPA	Q13219	1627 aa		33.24	■■■□□ 2.91
TXNL4A-208	ENST00000588162	PIGB	Q92521	554 aa		33.23	■■■□□ 2.91
TXNL4A-208	ENST00000588162	SENP3-EIF4A1	A0A087X0R7	540 aa		33.22	■■■□□ 2.91
TXNL4A-208	ENST00000588162	SALL2	Q9Y467	1007 aa	Predicted RBP	33.22	■■■□□ 2.91
TXNL4A-208	ENST00000588162	BTAF1	O14981	1849 aa		33.22	■■■□□ 2.91
TXNL4A-208	ENST00000588162	TAF7	Q15545	349 aa	Predicted RBP	33.21	■■■□□ 2.91
TXNL4A-208	ENST00000588162	ZNF827	Q17R98	1081 aa		33.21	■■■□□ 2.91
TXNL4A-208	ENST00000588162	SIPA1L3	O60292	1781 aa	Predicted RBP	33.2	■■■□□ 2.91
TXNL4A-208	ENST00000588162	THUMPD2	Q9BTF0	503 aa	Known RBP	33.2	■■■□□ 2.91
TXNL4A-208	ENST00000588162	CHD4	Q14839	1912 aa		33.2	■■■□□ 2.9
TXNL4A-208	ENST00000588162	C1QTNF8	P60827	252 aa		33.19	■■■□□ 2.9
TXNL4A-208	ENST00000588162	WWC1	Q8IX03	1113 aa		33.18	■■■□□ 2.9
TXNL4A-208	ENST00000588162	SMARCC1	Q92922	1105 aa	Predicted RBP	33.18	■■■□□ 2.9
TXNL4A-208	ENST00000588162	LRRC4B	Q9NT99	713 aa		33.18	■■■□□ 2.9
TXNL4A-208	ENST00000588162	BTBD11	A6QL63	1104 aa		33.16	■■■□□ 2.9
TXNL4A-208	ENST00000588162	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.14	■■■□□ 2.9
TXNL4A-208	ENST00000588162	GPR162	Q16538	588 aa		33.14	■■■□□ 2.9
TXNL4A-208	ENST00000588162	WDR63	Q8IWG1	891 aa		33.14	■■■□□ 2.9
TXNL4A-208	ENST00000588162	BABAM1	Q9NWV8	329 aa		33.14	■■■□□ 2.9
TXNL4A-208	ENST00000588162	TTC5	Q8N0Z6	440 aa		33.12	■■■□□ 2.89
TXNL4A-208	ENST00000588162	SLC16A10	Q8TF71	515 aa		33.12	■■■□□ 2.89
TXNL4A-208	ENST00000588162	AKT1S1	Q96B36	256 aa		33.12	■■■□□ 2.89
TXNL4A-208	ENST00000588162	ATG3	Q9NT62	314 aa		33.12	■■■□□ 2.89
TXNL4A-208	ENST00000588162	ASAP1	Q9ULH1	1129 aa		33.12	■■■□□ 2.89
TXNL4A-208	ENST00000588162	GNAI1	P63096	354 aa		33.1	■■■□□ 2.89
TXNL4A-208	ENST00000588162	LAS1L	Q9Y4W2	734 aa	Known RBP	33.1	■■■□□ 2.89
TXNL4A-208	ENST00000588162	IL16	Q14005	1332 aa		33.09	■■■□□ 2.89
TXNL4A-208	ENST00000588162	SLC27A3	Q5K4L6	730 aa		33.09	■■■□□ 2.89
TXNL4A-208	ENST00000588162	ZNF790	Q6PG37	636 aa		33.08	■■■□□ 2.89
TXNL4A-208	ENST00000588162	CFAP44	Q96MT7	982 aa		33.08	■■■□□ 2.89
TXNL4A-208	ENST00000588162	IFT57	Q9NWB7	429 aa		33.08	■■■□□ 2.89
TXNL4A-208	ENST00000588162	PALLD	Q8WX93	1383 aa		33.08	■■■□□ 2.89
TXNL4A-208	ENST00000588162	POLD1	P28340	1107 aa		33.07	■■■□□ 2.88
TXNL4A-208	ENST00000588162	SLC39A6	Q13433	755 aa		33.07	■■■□□ 2.88
TXNL4A-208	ENST00000588162	KLHL34	Q8N239	644 aa		33.07	■■■□□ 2.88
TXNL4A-208	ENST00000588162	TSPYL4	Q9UJ04	414 aa		33.07	■■■□□ 2.88
TXNL4A-208	ENST00000588162	MIS18A	Q9NYP9	233 aa		33.06	■■■□□ 2.88
TXNL4A-208	ENST00000588162	CHL1	O00533	1208 aa		33.05	■■■□□ 2.88
TXNL4A-208	ENST00000588162	LY75	O60449	1722 aa		33.05	■■■□□ 2.88
TXNL4A-208	ENST00000588162	PNPLA7	Q6ZV29	1317 aa		33.04	■■■□□ 2.88
TXNL4A-208	ENST00000588162	KDM3B	Q7LBC6	1761 aa		33.04	■■■□□ 2.88
TXNL4A-208	ENST00000588162	HMGB2	P26583	209 aa	Known RBP	33.04	■■■□□ 2.88
TXNL4A-208	ENST00000588162	ZNF521	Q96K83	1311 aa		33.03	■■■□□ 2.88
TXNL4A-208	ENST00000588162	RBM42	Q9BTD8	480 aa	Known RBP	33.03	■■■□□ 2.88
TXNL4A-208	ENST00000588162	ZNF853	P0CG23	659 aa		33.02	■■■□□ 2.88
TXNL4A-208	ENST00000588162	UBR2	Q8IWV8	1755 aa		33.01	■■■□□ 2.88
TXNL4A-208	ENST00000588162	PTCD1	O75127	700 aa	Known RBP	33.01	■■■□□ 2.87
TXNL4A-208	ENST00000588162	GOLGA2	Q08379	1002 aa		33.01	■■■□□ 2.87
TXNL4A-208	ENST00000588162	FMNL2	Q96PY5	1086 aa		33.01	■■■□□ 2.87
TXNL4A-208	ENST00000588162	TFCP2L1	Q9NZI6	479 aa		33.01	■■■□□ 2.87
TXNL4A-208	ENST00000588162	QSER1	Q2KHR3	1735 aa		33	■■■□□ 2.87
TXNL4A-208	ENST00000588162	LOC102724428	A0A0B4J2F2	783 aa		33	■■■□□ 2.87
TXNL4A-208	ENST00000588162	SIK1	P57059	783 aa		33	■■■□□ 2.87
TXNL4A-208	ENST00000588162	PELP1	Q8IZL8	1130 aa	Known RBP	33	■■■□□ 2.87
TXNL4A-208	ENST00000588162	GIGYF1	O75420	1035 aa	Predicted RBP	32.99	■■■□□ 2.87
TXNL4A-208	ENST00000588162	KCNQ3	O43525	872 aa		32.98	■■■□□ 2.87
TXNL4A-208	ENST00000588162	KCNQ4	P56696	695 aa		32.98	■■■□□ 2.87
TXNL4A-208	ENST00000588162	MYH16	Q9H6N6	1097 aa		32.98	■■■□□ 2.87
TXNL4A-208	ENST00000588162	CCNL1	Q9UK58	526 aa	Predicted RBP	32.98	■■■□□ 2.87
TXNL4A-208	ENST00000588162	COL24A1	Q17RW2	1714 aa		32.97	■■■□□ 2.87
TXNL4A-208	ENST00000588162	VSIG10	Q8N0Z9	540 aa		32.97	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms