RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 DCAF8L1A6NGE4 600 aa17.86■□□□□ 0.45
H3F3B-205ENST00000587171 FLAD1Q8NFF5 587 aa17.86■□□□□ 0.45
H3F3B-205ENST00000587171 C1orf141Q5JVX7 400 aa17.85■□□□□ 0.45
H3F3B-205ENST00000587171 LINC00116Q8NCU8 138 aa17.85■□□□□ 0.45
H3F3B-205ENST00000587171 AK7Q96M32 723 aa17.85■□□□□ 0.45
H3F3B-205ENST00000587171 COL5A3P25940 1745 aaPredicted RBP17.84■□□□□ 0.45
H3F3B-205ENST00000587171 MSH5O43196 834 aa17.84■□□□□ 0.45
H3F3B-205ENST00000587171 DIAPH1O60610 1272 aaKnown RBP17.84■□□□□ 0.45
H3F3B-205ENST00000587171 AMIGO3Q86WK7 504 aa17.84■□□□□ 0.45
H3F3B-205ENST00000587171 ATP6V1AP38606 617 aa17.83■□□□□ 0.44
H3F3B-205ENST00000587171 ITPK1Q13572 414 aa17.83■□□□□ 0.44
H3F3B-205ENST00000587171 HMOX1P09601 288 aa17.82■□□□□ 0.44
H3F3B-205ENST00000587171 CABP4P57796 275 aa17.82■□□□□ 0.44
H3F3B-205ENST00000587171 ADAMTS7Q9UKP4 1686 aa17.81■□□□□ 0.44
H3F3B-205ENST00000587171 SSFA2P28290 1259 aa17.81■□□□□ 0.44
H3F3B-205ENST00000587171 CNGB1Q14028 1251 aaPredicted RBP17.81■□□□□ 0.44
H3F3B-205ENST00000587171 AKAP4Q5JQC9 854 aa17.81■□□□□ 0.44
H3F3B-205ENST00000587171 SLC4A9Q96Q91 983 aa17.81■□□□□ 0.44
H3F3B-205ENST00000587171 MYH14Q7Z406 1995 aaKnown RBP17.8■□□□□ 0.44
H3F3B-205ENST00000587171 CHD4Q14839 1912 aa17.8■□□□□ 0.44
H3F3B-205ENST00000587171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.8■□□□□ 0.44
H3F3B-205ENST00000587171 MSL1Q68DK7 614 aa17.8■□□□□ 0.44
H3F3B-205ENST00000587171 CICQ96RK0 1608 aaPredicted RBP17.8■□□□□ 0.44
H3F3B-205ENST00000587171 PHF14O94880 888 aa17.79■□□□□ 0.44
H3F3B-205ENST00000587171 NFATC2IPQ8NCF5 419 aa17.79■□□□□ 0.44
H3F3B-205ENST00000587171 MRC1P22897 1456 aa17.79■□□□□ 0.44
H3F3B-205ENST00000587171 GNPATO15228 680 aa17.78■□□□□ 0.44
H3F3B-205ENST00000587171 YY1P25490 414 aa17.78■□□□□ 0.44
H3F3B-205ENST00000587171 SMIM5Q71RC9 77 aa17.78■□□□□ 0.44
H3F3B-205ENST00000587171 KLHL34Q8N239 644 aa17.78■□□□□ 0.44
H3F3B-205ENST00000587171 RBM42Q9BTD8 480 aaKnown RBP17.78■□□□□ 0.44
H3F3B-205ENST00000587171 MTHFSDQ2M296 383 aaKnown RBP17.77■□□□□ 0.44
H3F3B-205ENST00000587171 TJP1Q07157 1748 aa17.77■□□□□ 0.44
H3F3B-205ENST00000587171 SLC52A2Q9HAB3 445 aa17.76■□□□□ 0.43
H3F3B-205ENST00000587171 CNTNAP4Q9C0A0 1308 aa17.75■□□□□ 0.43
H3F3B-205ENST00000587171 U2SURPO15042 1029 aaKnown RBP17.75■□□□□ 0.43
H3F3B-205ENST00000587171 RC3H1Q5TC82 1133 aaKnown RBP17.75■□□□□ 0.43
H3F3B-205ENST00000587171 NLGN2Q8NFZ4 835 aa17.75■□□□□ 0.43
H3F3B-205ENST00000587171 LGR6Q9HBX8 967 aa17.75■□□□□ 0.43
H3F3B-205ENST00000587171 RNMTO43148 476 aaKnown RBP17.74■□□□□ 0.43
H3F3B-205ENST00000587171 PTCD1O75127 700 aaKnown RBP17.74■□□□□ 0.43
H3F3B-205ENST00000587171 C4AP0C0L4 1744 aa17.74■□□□□ 0.43
H3F3B-205ENST00000587171 CFAP53Q96M91 514 aa17.73■□□□□ 0.43
H3F3B-205ENST00000587171 RTCBQ9Y3I0 505 aaKnown RBP17.73■□□□□ 0.43
H3F3B-205ENST00000587171 UBR2Q8IWV8 1755 aa17.72■□□□□ 0.43
H3F3B-205ENST00000587171 ADRA2BP18089 450 aa17.72■□□□□ 0.43
H3F3B-205ENST00000587171 PPP2R1AP30153 589 aa17.72■□□□□ 0.43
H3F3B-205ENST00000587171 RPS6KA4O75676 772 aa17.71■□□□□ 0.43
H3F3B-205ENST00000587171 TRAPPC3LQ5T215 181 aa17.71■□□□□ 0.43
H3F3B-205ENST00000587171 CD2APQ9Y5K6 639 aa17.71■□□□□ 0.43
H3F3B-205ENST00000587171 KCPQ6ZWJ8 1503 aa17.71■□□□□ 0.43
H3F3B-205ENST00000587171 SIPA1L3O60292 1781 aaPredicted RBP17.71■□□□□ 0.43
H3F3B-205ENST00000587171 GPR162Q16538 588 aa17.7■□□□□ 0.42
H3F3B-205ENST00000587171 GAS2L2Q8NHY3 880 aa17.7■□□□□ 0.42
H3F3B-205ENST00000587171 CRKLP46109 303 aaKnown RBP17.69■□□□□ 0.42
H3F3B-205ENST00000587171 ARHGEF1Q92888 912 aaKnown RBP17.69■□□□□ 0.42
H3F3B-205ENST00000587171 RSPH6AQ9H0K4 717 aa17.69■□□□□ 0.42
H3F3B-205ENST00000587171 KIF13BQ9NQT8 1826 aa17.68■□□□□ 0.42
H3F3B-205ENST00000587171 SLC39A6Q13433 755 aa17.68■□□□□ 0.42
H3F3B-205ENST00000587171 NUDCQ9Y266 331 aa17.68■□□□□ 0.42
H3F3B-205ENST00000587171 GNAT3A8MTJ3 354 aa17.67■□□□□ 0.42
H3F3B-205ENST00000587171 PRKAR2BP31323 418 aa17.67■□□□□ 0.42
H3F3B-205ENST00000587171 MMP10P09238 476 aa17.66■□□□□ 0.42
H3F3B-205ENST00000587171 RFC4P35249 363 aa17.66■□□□□ 0.42
H3F3B-205ENST00000587171 DNAJC10Q8IXB1 793 aa17.66■□□□□ 0.42
H3F3B-205ENST00000587171 PELP1Q8IZL8 1130 aaKnown RBP17.66■□□□□ 0.42
H3F3B-205ENST00000587171 NLGN1Q8N2Q7 840 aa17.66■□□□□ 0.42
H3F3B-205ENST00000587171 IL17REQ8NFR9 667 aa17.66■□□□□ 0.42
H3F3B-205ENST00000587171 PHACTR3Q96KR7 559 aa17.66■□□□□ 0.42
H3F3B-205ENST00000587171 GYS1P13807 737 aa17.65■□□□□ 0.42
H3F3B-205ENST00000587171 YBX3P16989 372 aaKnown RBP eCLIP17.65■□□□□ 0.42
H3F3B-205ENST00000587171 INTS5Q6P9B9 1019 aaKnown RBP17.65■□□□□ 0.42
H3F3B-205ENST00000587171 CEMIPQ8WUJ3 1361 aa17.65■□□□□ 0.42
H3F3B-205ENST00000587171 U2AF1L5P0DN76 240 aaPredicted RBP17.64■□□□□ 0.41
H3F3B-205ENST00000587171 U2AF1Q01081 240 aaKnown RBP eCLIP17.64■□□□□ 0.41
H3F3B-205ENST00000587171 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.41
H3F3B-205ENST00000587171 KIAA1551Q9HCM1 1747 aa17.64■□□□□ 0.41
H3F3B-205ENST00000587171 FCHSD2O94868 740 aa17.63■□□□□ 0.41
H3F3B-205ENST00000587171 CYP19A1P11511 503 aaPredicted RBP17.63■□□□□ 0.41
H3F3B-205ENST00000587171 TEFQ10587 303 aa17.63■□□□□ 0.41
H3F3B-205ENST00000587171 CCDC87Q9NVE4 849 aa17.63■□□□□ 0.41
H3F3B-205ENST00000587171 GRIN3BO60391 1043 aa17.62■□□□□ 0.41
H3F3B-205ENST00000587171 USP42Q9H9J4 1324 aaKnown RBP17.62■□□□□ 0.41
H3F3B-205ENST00000587171 TTC5Q8N0Z6 440 aa17.61■□□□□ 0.41
H3F3B-205ENST00000587171 ZNF784Q8NCA9 323 aaPredicted RBP17.61■□□□□ 0.41
H3F3B-205ENST00000587171 SOS1Q07889 1333 aaPredicted RBP17.61■□□□□ 0.41
H3F3B-205ENST00000587171 C10orf71Q711Q0 1435 aa17.61■□□□□ 0.41
H3F3B-205ENST00000587171 N4BP2Q86UW6 1770 aaPredicted RBP17.61■□□□□ 0.41
H3F3B-205ENST00000587171 ZNF790Q6PG37 636 aa17.6■□□□□ 0.41
H3F3B-205ENST00000587171 SRP68Q9UHB9 627 aaKnown RBP17.6■□□□□ 0.41
H3F3B-205ENST00000587171 DLG5Q8TDM6 1919 aa17.6■□□□□ 0.41
H3F3B-205ENST00000587171 PXDNLA1KZ92 1463 aa17.59■□□□□ 0.41
H3F3B-205ENST00000587171 ZNF496Q96IT1 587 aaPredicted RBP17.59■□□□□ 0.41
H3F3B-205ENST00000587171 ZBTB1Q9Y2K1 713 aa17.59■□□□□ 0.41
H3F3B-205ENST00000587171 BRCA1P38398 1863 aaKnown RBP17.58■□□□□ 0.41
H3F3B-205ENST00000587171 COL15A1P39059 1388 aa17.58■□□□□ 0.4
H3F3B-205ENST00000587171 HEG1Q9ULI3 1381 aa17.58■□□□□ 0.4
H3F3B-205ENST00000587171 FKBP8Q14318 412 aa17.58■□□□□ 0.4
H3F3B-205ENST00000587171 PARP3Q9Y6F1 533 aa17.57■□□□□ 0.4
H3F3B-205ENST00000587171 STARD3NLO95772 234 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms