RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 ATG3Q9NT62 314 aa24.59■■□□□ 1.53
HMG20B-216ENST00000585900 MSL1Q68DK7 614 aa24.58■■□□□ 1.53
HMG20B-216ENST00000585900 KDM6AO15550 1401 aaPredicted RBP24.58■■□□□ 1.53
HMG20B-216ENST00000585900 PHF14O94880 888 aa24.57■■□□□ 1.52
HMG20B-216ENST00000585900 CNGB1Q14028 1251 aaPredicted RBP24.57■■□□□ 1.52
HMG20B-216ENST00000585900 DIAPH1O60610 1272 aaKnown RBP24.56■■□□□ 1.52
HMG20B-216ENST00000585900 SSFA2P28290 1259 aa24.56■■□□□ 1.52
HMG20B-216ENST00000585900 LINC00116Q8NCU8 138 aa24.56■■□□□ 1.52
HMG20B-216ENST00000585900 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.54■■□□□ 1.52
HMG20B-216ENST00000585900 GNPATO15228 680 aa24.54■■□□□ 1.52
HMG20B-216ENST00000585900 ITPK1Q13572 414 aa24.54■■□□□ 1.52
HMG20B-216ENST00000585900 RBM42Q9BTD8 480 aaKnown RBP24.54■■□□□ 1.52
HMG20B-216ENST00000585900 HMOX1P09601 288 aa24.53■■□□□ 1.52
HMG20B-216ENST00000585900 AKAP4Q5JQC9 854 aa24.52■■□□□ 1.52
HMG20B-216ENST00000585900 UBR3Q6ZT12 1888 aa24.51■■□□□ 1.51
HMG20B-216ENST00000585900 GPR162Q16538 588 aa24.51■■□□□ 1.51
HMG20B-216ENST00000585900 AMIGO3Q86WK7 504 aa24.49■■□□□ 1.51
HMG20B-216ENST00000585900 ZNF831Q5JPB2 1677 aa24.49■■□□□ 1.51
HMG20B-216ENST00000585900 PELP1Q8IZL8 1130 aaKnown RBP24.48■■□□□ 1.51
HMG20B-216ENST00000585900 NFATC2IPQ8NCF5 419 aa24.48■■□□□ 1.51
HMG20B-216ENST00000585900 U2SURPO15042 1029 aaKnown RBP24.47■■□□□ 1.51
HMG20B-216ENST00000585900 NLGN2Q8NFZ4 835 aa24.47■■□□□ 1.51
HMG20B-216ENST00000585900 CFAP53Q96M91 514 aa24.47■■□□□ 1.51
HMG20B-216ENST00000585900 RTCBQ9Y3I0 505 aaKnown RBP24.47■■□□□ 1.51
HMG20B-216ENST00000585900 COL3A1P02461 1466 aaPredicted RBP24.46■■□□□ 1.51
HMG20B-216ENST00000585900 PTCD1O75127 700 aaKnown RBP24.46■■□□□ 1.51
HMG20B-216ENST00000585900 SMIM5Q71RC9 77 aa24.46■■□□□ 1.51
HMG20B-216ENST00000585900 CNTNAP4Q9C0A0 1308 aa24.45■■□□□ 1.5
HMG20B-216ENST00000585900 SLC4A9Q96Q91 983 aa24.45■■□□□ 1.5
HMG20B-216ENST00000585900 RC3H1Q5TC82 1133 aaKnown RBP24.44■■□□□ 1.5
HMG20B-216ENST00000585900 SLC52A2Q9HAB3 445 aa24.44■■□□□ 1.5
HMG20B-216ENST00000585900 CD2APQ9Y5K6 639 aa24.44■■□□□ 1.5
HMG20B-216ENST00000585900 SCN11AQ9UI33 1791 aa24.44■■□□□ 1.5
HMG20B-216ENST00000585900 ADRA2BP18089 450 aa24.43■■□□□ 1.5
HMG20B-216ENST00000585900 TRAPPC3LQ5T215 181 aa24.43■■□□□ 1.5
HMG20B-216ENST00000585900 RNMTO43148 476 aaKnown RBP24.42■■□□□ 1.5
HMG20B-216ENST00000585900 MTHFSDQ2M296 383 aaKnown RBP24.42■■□□□ 1.5
HMG20B-216ENST00000585900 COL5A3P25940 1745 aaPredicted RBP24.41■■□□□ 1.5
HMG20B-216ENST00000585900 MRC1P22897 1456 aa24.41■■□□□ 1.5
HMG20B-216ENST00000585900 LGR6Q9HBX8 967 aa24.4■■□□□ 1.5
HMG20B-216ENST00000585900 RPS6KA4O75676 772 aa24.39■■□□□ 1.49
HMG20B-216ENST00000585900 GAS2L2Q8NHY3 880 aa24.39■■□□□ 1.49
HMG20B-216ENST00000585900 NUDCQ9Y266 331 aa24.39■■□□□ 1.49
HMG20B-216ENST00000585900 RFC4P35249 363 aa24.38■■□□□ 1.49
HMG20B-216ENST00000585900 GRIN3BO60391 1043 aa24.37■■□□□ 1.49
HMG20B-216ENST00000585900 CRKLP46109 303 aaKnown RBP24.37■■□□□ 1.49
HMG20B-216ENST00000585900 UTRNP46939 3433 aa24.36■■□□□ 1.49
HMG20B-216ENST00000585900 CICQ96RK0 1608 aaPredicted RBP24.36■■□□□ 1.49
HMG20B-216ENST00000585900 MMP10P09238 476 aa24.36■■□□□ 1.49
HMG20B-216ENST00000585900 NLGN1Q8N2Q7 840 aa24.36■■□□□ 1.49
HMG20B-216ENST00000585900 ARHGEF1Q92888 912 aaKnown RBP24.36■■□□□ 1.49
HMG20B-216ENST00000585900 CHD4Q14839 1912 aa24.35■■□□□ 1.49
HMG20B-216ENST00000585900 ADAMTS7Q9UKP4 1686 aa24.34■■□□□ 1.49
HMG20B-216ENST00000585900 PPP2R1AP30153 589 aa24.34■■□□□ 1.49
HMG20B-216ENST00000585900 TJP1Q07157 1748 aa24.34■■□□□ 1.49
HMG20B-216ENST00000585900 GNAT3A8MTJ3 354 aa24.33■■□□□ 1.49
HMG20B-216ENST00000585900 TEFQ10587 303 aa24.33■■□□□ 1.49
HMG20B-216ENST00000585900 YBX3P16989 372 aaKnown RBP eCLIP24.32■■□□□ 1.486e-7■■□□□ 13.5
HMG20B-216ENST00000585900 PRKAR2BP31323 418 aa24.32■■□□□ 1.48
HMG20B-216ENST00000585900 SLC39A6Q13433 755 aa24.32■■□□□ 1.48
HMG20B-216ENST00000585900 TTC5Q8N0Z6 440 aa24.32■■□□□ 1.48
HMG20B-216ENST00000585900 ZNF784Q8NCA9 323 aaPredicted RBP24.32■■□□□ 1.48
HMG20B-216ENST00000585900 DNAJC10Q8IXB1 793 aa24.31■■□□□ 1.48
HMG20B-216ENST00000585900 U2AF1L5P0DN76 240 aaPredicted RBP24.3■■□□□ 1.48
HMG20B-216ENST00000585900 GYS1P13807 737 aa24.3■■□□□ 1.48
HMG20B-216ENST00000585900 U2AF1Q01081 240 aaKnown RBP eCLIP24.3■■□□□ 1.48
HMG20B-216ENST00000585900 CCDC87Q9NVE4 849 aa24.3■■□□□ 1.48
HMG20B-216ENST00000585900 KCPQ6ZWJ8 1503 aa24.3■■□□□ 1.48
HMG20B-216ENST00000585900 VIRMAQ69YN4 1812 aaKnown RBP24.29■■□□□ 1.48
HMG20B-216ENST00000585900 RSPH6AQ9H0K4 717 aa24.29■■□□□ 1.48
HMG20B-216ENST00000585900 C4AP0C0L4 1744 aa24.29■■□□□ 1.48
HMG20B-216ENST00000585900 MYH14Q7Z406 1995 aaKnown RBP24.29■■□□□ 1.48
HMG20B-216ENST00000585900 VSIG10Q8N0Z9 540 aa24.28■■□□□ 1.48
HMG20B-216ENST00000585900 PARP3Q9Y6F1 533 aa24.28■■□□□ 1.48
HMG20B-216ENST00000585900 INTS5Q6P9B9 1019 aaKnown RBP24.27■■□□□ 1.48
HMG20B-216ENST00000585900 GOLGB1Q14789 3259 aaKnown RBP24.27■■□□□ 1.48
HMG20B-216ENST00000585900 USP42Q9H9J4 1324 aaKnown RBP24.27■■□□□ 1.48
HMG20B-216ENST00000585900 ZPR1O75312 459 aa24.25■■□□□ 1.47
HMG20B-216ENST00000585900 CYP19A1P11511 503 aaPredicted RBP24.25■■□□□ 1.47
HMG20B-216ENST00000585900 IL17REQ8NFR9 667 aa24.25■■□□□ 1.47
HMG20B-216ENST00000585900 C10orf71Q711Q0 1435 aa24.25■■□□□ 1.47
HMG20B-216ENST00000585900 FCHSD2O94868 740 aa24.24■■□□□ 1.47
HMG20B-216ENST00000585900 PHACTR3Q96KR7 559 aa24.24■■□□□ 1.47
HMG20B-216ENST00000585900 SRP68Q9UHB9 627 aaKnown RBP24.24■■□□□ 1.47
HMG20B-216ENST00000585900 STARD3NLO95772 234 aa24.23■■□□□ 1.47
HMG20B-216ENST00000585900 RTF1Q92541 710 aaKnown RBP24.23■■□□□ 1.47
HMG20B-216ENST00000585900 WWC3Q9ULE0 1092 aa24.23■■□□□ 1.47
HMG20B-216ENST00000585900 SOS1Q07889 1333 aaPredicted RBP24.23■■□□□ 1.47
HMG20B-216ENST00000585900 UBR2Q8IWV8 1755 aa24.23■■□□□ 1.47
HMG20B-216ENST00000585900 COL15A1P39059 1388 aa24.22■■□□□ 1.47
HMG20B-216ENST00000585900 CEMIPQ8WUJ3 1361 aa24.22■■□□□ 1.47
HMG20B-216ENST00000585900 NEFMP07197 916 aa24.22■■□□□ 1.47
HMG20B-216ENST00000585900 TGFB2P61812 414 aa24.22■■□□□ 1.47
HMG20B-216ENST00000585900 ZNF790Q6PG37 636 aa24.22■■□□□ 1.47
HMG20B-216ENST00000585900 PXDNLA1KZ92 1463 aa24.21■■□□□ 1.47
HMG20B-216ENST00000585900 FKBP8Q14318 412 aa24.21■■□□□ 1.47
HMG20B-216ENST00000585900 ZBTB1Q9Y2K1 713 aa24.21■■□□□ 1.47
HMG20B-216ENST00000585900 TEX13AQ9BXU3 409 aaPredicted RBP24.2■■□□□ 1.46
HMG20B-216ENST00000585900 KIF13BQ9NQT8 1826 aa24.19■■□□□ 1.46
HMG20B-216ENST00000585900 HEG1Q9ULI3 1381 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms