RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 TATP17735 454 aaPredicted RBP15.2■□□□□ 0.02
RNF43-208ENST00000584437 MAP2K1Q02750 393 aaPredicted RBP15.2■□□□□ 0.02
RNF43-208ENST00000584437 ADCY5O95622 1261 aa15.2■□□□□ 0.02
RNF43-208ENST00000584437 CDK19Q9BWU1 502 aa15.2■□□□□ 0.02
RNF43-208ENST00000584437 EXOC6BQ9Y2D4 811 aa15.2■□□□□ 0.02
RNF43-208ENST00000584437 BAG4O95429 457 aaKnown RBP15.2■□□□□ 0.02
RNF43-208ENST00000584437 FKBP4Q02790 459 aaKnown RBP eCLIP15.2■□□□□ 0.02
RNF43-208ENST00000584437 POLR3GO15318 223 aaPredicted RBP15.19■□□□□ 0.02
RNF43-208ENST00000584437 ATF3P18847 181 aa15.19■□□□□ 0.02
RNF43-208ENST00000584437 PAFAH1B1P43034 410 aa15.19■□□□□ 0.02
RNF43-208ENST00000584437 FKBP15Q5T1M5 1219 aa15.19■□□□□ 0.02
RNF43-208ENST00000584437 WWC2Q6AWC2 1192 aa15.19■□□□□ 0.02
RNF43-208ENST00000584437 PRPF40BQ6NWY9 871 aaKnown RBP15.19■□□□□ 0.02
RNF43-208ENST00000584437 TMEM132AQ24JP5 1023 aa15.19■□□□□ 0.02
RNF43-208ENST00000584437 SMARCC1Q92922 1105 aaPredicted RBP15.19■□□□□ 0.02
RNF43-208ENST00000584437 PHAXQ9H814 394 aaKnown RBP15.19■□□□□ 0.02
RNF43-208ENST00000584437 CABP1Q9NZU7 370 aa15.19■□□□□ 0.02
RNF43-208ENST00000584437 C20orf194Q5TEA3 1177 aa15.19■□□□□ 0.02
RNF43-208ENST00000584437 ZNF530Q6P9A1 599 aaPredicted RBP15.19■□□□□ 0.02
RNF43-208ENST00000584437 TBC1D32Q96NH3 1257 aa15.19■□□□□ 0.02
RNF43-208ENST00000584437 TDO2P48775 406 aa15.19■□□□□ 0.02
RNF43-208ENST00000584437 STX1AQ16623 288 aa15.19■□□□□ 0.02
RNF43-208ENST00000584437 BMP2KLQ5H9B9 411 aa15.19■□□□□ 0.02
RNF43-208ENST00000584437 CCDC91Q7Z6B0 441 aa15.19■□□□□ 0.02
RNF43-208ENST00000584437 STK11IPQ8N1F8 1099 aa15.19■□□□□ 0.02
RNF43-208ENST00000584437 USO1O60763 962 aaKnown RBP15.18■□□□□ 0.02
RNF43-208ENST00000584437 GTF2F1P35269 517 aaKnown RBP eCLIP15.18■□□□□ 0.025e-8■■■■□ 25.1
RNF43-208ENST00000584437 CETN2P41208 172 aa15.18■□□□□ 0.02
RNF43-208ENST00000584437 NUTM1Q86Y26 1132 aa15.18■□□□□ 0.02
RNF43-208ENST00000584437 SEPT11Q9NVA2 429 aaKnown RBP15.18■□□□□ 0.02
RNF43-208ENST00000584437 SSH1Q8WYL5 1049 aa15.18■□□□□ 0.02
RNF43-208ENST00000584437 RAD54L2Q9Y4B4 1467 aa15.17■□□□□ 0.02
RNF43-208ENST00000584437 RPGRIP1LQ68CZ1 1315 aa15.17■□□□□ 0.02
RNF43-208ENST00000584437 SNW1Q13573 536 aaKnown RBP15.17■□□□□ 0.02
RNF43-208ENST00000584437 LUZP1Q86V48 1076 aa15.17■□□□□ 0.02
RNF43-208ENST00000584437 CCDC171Q6TFL3 1326 aa15.17■□□□□ 0.02
RNF43-208ENST00000584437 C8orf76Q96K31 380 aa15.17■□□□□ 0.02
RNF43-208ENST00000584437 TIGD1Q96MW7 591 aa15.17■□□□□ 0.02
RNF43-208ENST00000584437 UBE2HP62256 183 aa15.17■□□□□ 0.02
RNF43-208ENST00000584437 CCDC150Q8NCX0 1101 aa15.17■□□□□ 0.02
RNF43-208ENST00000584437 CCDC196A0A1B0GTZ2 297 aa15.17■□□□□ 0.02
RNF43-208ENST00000584437 YEATS4O95619 227 aa15.17■□□□□ 0.02
RNF43-208ENST00000584437 SSBP05455 408 aaKnown RBP eCLIP15.17■□□□□ 0.02
RNF43-208ENST00000584437 MAPK8IP2Q13387 824 aaPredicted RBP15.17■□□□□ 0.02
RNF43-208ENST00000584437 KRT222Q8N1A0 295 aa15.17■□□□□ 0.02
RNF43-208ENST00000584437 TIAM1Q13009 1591 aa15.16■□□□□ 0.02
RNF43-208ENST00000584437 PPP1R12BO60237 982 aaPredicted RBP15.16■□□□□ 0.02
RNF43-208ENST00000584437 VPS36Q86VN1 386 aa15.16■□□□□ 0.02
RNF43-208ENST00000584437 TRMT1Q9NXH9 659 aaKnown RBP15.16■□□□□ 0.02
RNF43-208ENST00000584437 NSD3Q9BZ95 1437 aa15.16■□□□□ 0.02
RNF43-208ENST00000584437 FGFR1OPO95684 399 aaKnown RBP15.16■□□□□ 0.02
RNF43-208ENST00000584437 SMC1AQ14683 1233 aaKnown RBP15.16■□□□□ 0.02
RNF43-208ENST00000584437 ZMYND15Q9H091 742 aa15.16■□□□□ 0.02
RNF43-208ENST00000584437 LRSAM1Q6UWE0 723 aa15.16■□□□□ 0.02
RNF43-208ENST00000584437 CKAP2LQ8IYA6 745 aa15.16■□□□□ 0.02
RNF43-208ENST00000584437 NAA15Q9BXJ9 866 aaKnown RBP15.16■□□□□ 0.02
RNF43-208ENST00000584437 CEP135Q66GS9 1140 aa15.15■□□□□ 0.02
RNF43-208ENST00000584437 MPHOSPH8Q99549 860 aa15.15■□□□□ 0.02
RNF43-208ENST00000584437 IFFO1Q0D2I5 559 aa15.15■□□□□ 0.02
RNF43-208ENST00000584437 GCOM1H8Y6P7 765 aaPredicted RBP15.15■□□□□ 0.02
RNF43-208ENST00000584437 STX6O43752 255 aa15.15■□□□□ 0.02
RNF43-208ENST00000584437 MYZAPP0CAP1 466 aa15.15■□□□□ 0.02
RNF43-208ENST00000584437 DESP17661 470 aa15.15■□□□□ 0.02
RNF43-208ENST00000584437 SYNJ2O15056 1496 aa15.15■□□□□ 0.02
RNF43-208ENST00000584437 ZNF165P49910 485 aa15.15■□□□□ 0.02
RNF43-208ENST00000584437 SPG7Q9UQ90 795 aa15.15■□□□□ 0.02
RNF43-208ENST00000584437 CABP4P57796 275 aa15.14■□□□□ 0.01
RNF43-208ENST00000584437 ZSCAN23Q3MJ62 389 aa15.14■□□□□ 0.01
RNF43-208ENST00000584437 ZHX1Q9UKY1 873 aaPredicted RBP15.14■□□□□ 0.01
RNF43-208ENST00000584437 RTEL1-TNFRSF6BF6WH68 1400 aa15.14■□□□□ 0.01
RNF43-208ENST00000584437 GOLGA6L10A0A0M3HER8 536 aa15.14■□□□□ 0.01
RNF43-208ENST00000584437 RNF187Q5TA31 235 aaPredicted RBP15.14■□□□□ 0.01
RNF43-208ENST00000584437 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.14■□□□□ 0.01
RNF43-208ENST00000584437 FSIP1Q8NA03 581 aa15.14■□□□□ 0.01
RNF43-208ENST00000584437 TSG101Q99816 390 aa15.14■□□□□ 0.01
RNF43-208ENST00000584437 RAI14Q9P0K7 980 aa15.14■□□□□ 0.01
RNF43-208ENST00000584437 CACNA2D4Q7Z3S7 1137 aa15.14■□□□□ 0.01
RNF43-208ENST00000584437 RBM42Q9BTD8 480 aaKnown RBP15.14■□□□□ 0.01
RNF43-208ENST00000584437 FAM177BA6PVY3 158 aa15.14■□□□□ 0.01
RNF43-208ENST00000584437 TMC6Q7Z403 805 aa15.14■□□□□ 0.01
RNF43-208ENST00000584437 POTEJP0CG39 1038 aa15.13■□□□□ 0.01
RNF43-208ENST00000584437 AIDAQ96BJ3 306 aa15.13■□□□□ 0.01
RNF43-208ENST00000584437 DAPK1P53355 1430 aa15.13■□□□□ 0.01
RNF43-208ENST00000584437 SMARCA5O60264 1052 aaPredicted RBP15.13■□□□□ 0.01
RNF43-208ENST00000584437 KLHL10Q6JEL2 608 aa15.13■□□□□ 0.01
RNF43-208ENST00000584437 AFAP1Q8N556 730 aa15.13■□□□□ 0.01
RNF43-208ENST00000584437 SLC52A1Q9NWF4 448 aa15.13■□□□□ 0.01
RNF43-208ENST00000584437 CCDC175P0C221 793 aa15.13■□□□□ 0.01
RNF43-208ENST00000584437 DUSP27Q5VZP5 1158 aa15.13■□□□□ 0.01
RNF43-208ENST00000584437 CTR9Q6PD62 1173 aa15.13■□□□□ 0.01
RNF43-208ENST00000584437 TBC1D9Q6ZT07 1266 aa15.13■□□□□ 0.01
RNF43-208ENST00000584437 CNNM3Q8NE01 707 aa15.13■□□□□ 0.01
RNF43-208ENST00000584437 NUP88Q99567 741 aaPredicted RBP15.13■□□□□ 0.01
RNF43-208ENST00000584437 TUBB4AP04350 444 aa15.12■□□□□ 0.01
RNF43-208ENST00000584437 AKAP2Q9Y2D5 859 aa15.12■□□□□ 0.01
RNF43-208ENST00000584437 BTBD11A6QL63 1104 aa15.12■□□□□ 0.01
RNF43-208ENST00000584437 LMAN1P49257 510 aa15.12■□□□□ 0.01
RNF43-208ENST00000584437 DHX37Q8IY37 1157 aaKnown RBP15.12■□□□□ 0.01
RNF43-208ENST00000584437 ALS2CR12Q96Q35 445 aa15.12■□□□□ 0.01
RNF43-208ENST00000584437 ATP2B2Q01814 1243 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms