RNA–Protein interactions for RNA: ENST00000583842.1

CCDC84-210, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-210ENST00000583842 SLC52A2Q9HAB3 445 aa14.93□□□□□ -0.02
CCDC84-210ENST00000583842 QSER1Q2KHR3 1735 aa14.92□□□□□ -0.02
CCDC84-210ENST00000583842 RNMTO43148 476 aaKnown RBP14.92□□□□□ -0.02
CCDC84-210ENST00000583842 HMOX1P09601 288 aa14.92□□□□□ -0.02
CCDC84-210ENST00000583842 AK7Q96M32 723 aa14.92□□□□□ -0.02
CCDC84-210ENST00000583842 ZEB1P37275 1124 aaPredicted RBP14.91□□□□□ -0.02
CCDC84-210ENST00000583842 RALBP1Q15311 655 aa14.91□□□□□ -0.02
CCDC84-210ENST00000583842 VSIG10Q8N0Z9 540 aa14.91□□□□□ -0.02
CCDC84-210ENST00000583842 KDM6AO15550 1401 aaPredicted RBP14.91□□□□□ -0.02
CCDC84-210ENST00000583842 ITGB4P16144 1822 aa14.9□□□□□ -0.02
CCDC84-210ENST00000583842 GNAT3A8MTJ3 354 aa14.9□□□□□ -0.02
CCDC84-210ENST00000583842 HTATSF1O43719 755 aaKnown RBP14.9□□□□□ -0.02
CCDC84-210ENST00000583842 RPS6KA4O75676 772 aa14.9□□□□□ -0.02
CCDC84-210ENST00000583842 ITPK1Q13572 414 aa14.9□□□□□ -0.02
CCDC84-210ENST00000583842 LINC00116Q8NCU8 138 aa14.9□□□□□ -0.02
CCDC84-210ENST00000583842 SLC4A9Q96Q91 983 aa14.9□□□□□ -0.02
CCDC84-210ENST00000583842 FHDC1Q9C0D6 1143 aaPredicted RBP14.9□□□□□ -0.02
CCDC84-210ENST00000583842 PNNQ9H307 717 aaKnown RBP14.9□□□□□ -0.02
CCDC84-210ENST00000583842 LGR6Q9HBX8 967 aa14.9□□□□□ -0.02
CCDC84-210ENST00000583842 CNTNAP4Q9C0A0 1308 aa14.9□□□□□ -0.02
CCDC84-210ENST00000583842 COL3A1P02461 1466 aaPredicted RBP14.89□□□□□ -0.03
CCDC84-210ENST00000583842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.89□□□□□ -0.03
CCDC84-210ENST00000583842 U2SURPO15042 1029 aaKnown RBP14.89□□□□□ -0.03
CCDC84-210ENST00000583842 TRAPPC3LQ5T215 181 aa14.89□□□□□ -0.03
CCDC84-210ENST00000583842 RTCBQ9Y3I0 505 aaKnown RBP14.89□□□□□ -0.03
CCDC84-210ENST00000583842 CD2APQ9Y5K6 639 aa14.89□□□□□ -0.03
CCDC84-210ENST00000583842 ZNF831Q5JPB2 1677 aa14.89□□□□□ -0.03
CCDC84-210ENST00000583842 NLGN1Q8N2Q7 840 aa14.88□□□□□ -0.03
CCDC84-210ENST00000583842 RSPH6AQ9H0K4 717 aa14.88□□□□□ -0.03
CCDC84-210ENST00000583842 COL24A1Q17RW2 1714 aa14.87□□□□□ -0.03
CCDC84-210ENST00000583842 TOGARAM1Q9Y4F4 1720 aa14.87□□□□□ -0.03
CCDC84-210ENST00000583842 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
CCDC84-210ENST00000583842 TEX13AQ9BXU3 409 aaPredicted RBP14.87□□□□□ -0.03
CCDC84-210ENST00000583842 MSH5O43196 834 aa14.86□□□□□ -0.03
CCDC84-210ENST00000583842 U2AF1L5P0DN76 240 aaPredicted RBP14.86□□□□□ -0.03
CCDC84-210ENST00000583842 U2AF1Q01081 240 aaKnown RBP eCLIP14.86□□□□□ -0.03
CCDC84-210ENST00000583842 IL17REQ8NFR9 667 aa14.86□□□□□ -0.03
CCDC84-210ENST00000583842 GNPATO15228 680 aa14.85□□□□□ -0.03
CCDC84-210ENST00000583842 PRKAR2BP31323 418 aa14.84□□□□□ -0.03
CCDC84-210ENST00000583842 ARHGEF1Q92888 912 aaKnown RBP14.84□□□□□ -0.03
CCDC84-210ENST00000583842 PHACTR3Q96KR7 559 aa14.84□□□□□ -0.03
CCDC84-210ENST00000583842 CEMIPQ8WUJ3 1361 aa14.84□□□□□ -0.03
CCDC84-210ENST00000583842 C4BP0C0L5 1744 aa14.83□□□□□ -0.03
CCDC84-210ENST00000583842 PTCD1O75127 700 aaKnown RBP14.83□□□□□ -0.04
CCDC84-210ENST00000583842 TAF1LQ8IZX4 1826 aa14.82□□□□□ -0.04
CCDC84-210ENST00000583842 C5P01031 1676 aa14.82□□□□□ -0.04
CCDC84-210ENST00000583842 NEFMP07197 916 aa14.82□□□□□ -0.04
CCDC84-210ENST00000583842 RFC4P35249 363 aa14.82□□□□□ -0.04
CCDC84-210ENST00000583842 CRKLP46109 303 aaKnown RBP14.82□□□□□ -0.04
CCDC84-210ENST00000583842 TEFQ10587 303 aa14.82□□□□□ -0.04
CCDC84-210ENST00000583842 INTS5Q6P9B9 1019 aaKnown RBP14.82□□□□□ -0.04
CCDC84-210ENST00000583842 ZNF790Q6PG37 636 aa14.82□□□□□ -0.04
CCDC84-210ENST00000583842 AMIGO3Q86WK7 504 aa14.82□□□□□ -0.04
CCDC84-210ENST00000583842 STARD3NLO95772 234 aa14.81□□□□□ -0.04
CCDC84-210ENST00000583842 CYP19A1P11511 503 aaPredicted RBP14.81□□□□□ -0.04
CCDC84-210ENST00000583842 MRC1P22897 1456 aa14.81□□□□□ -0.04
CCDC84-210ENST00000583842 GRIN3BO60391 1043 aa14.8□□□□□ -0.04
CCDC84-210ENST00000583842 DDX10Q13206 875 aaKnown RBP14.8□□□□□ -0.04
CCDC84-210ENST00000583842 CNGB1Q14028 1251 aaPredicted RBP14.8□□□□□ -0.04
CCDC84-210ENST00000583842 TTC5Q8N0Z6 440 aa14.8□□□□□ -0.04
CCDC84-210ENST00000583842 RTF1Q92541 710 aaKnown RBP14.8□□□□□ -0.04
CCDC84-210ENST00000583842 PLEKHF1Q96S99 279 aa14.8□□□□□ -0.04
CCDC84-210ENST00000583842 ADAMTS7Q9UKP4 1686 aa14.8□□□□□ -0.04
CCDC84-210ENST00000583842 SCN11AQ9UI33 1791 aa14.8□□□□□ -0.04
CCDC84-210ENST00000583842 PHF14O94880 888 aa14.79□□□□□ -0.04
CCDC84-210ENST00000583842 TGFB2P61812 414 aa14.79□□□□□ -0.04
CCDC84-210ENST00000583842 CCDC87Q9NVE4 849 aa14.79□□□□□ -0.04
CCDC84-210ENST00000583842 GYS1P13807 737 aa14.78□□□□□ -0.04
CCDC84-210ENST00000583842 SLC39A6Q13433 755 aa14.78□□□□□ -0.04
CCDC84-210ENST00000583842 TAF7Q15545 349 aaPredicted RBP14.77□□□□□ -0.05
CCDC84-210ENST00000583842 DNAJC10Q8IXB1 793 aa14.77□□□□□ -0.05
CCDC84-210ENST00000583842 PNISRQ8TF01 805 aaKnown RBP14.77□□□□□ -0.05
CCDC84-210ENST00000583842 FMNL2Q96PY5 1086 aa14.77□□□□□ -0.05
CCDC84-210ENST00000583842 UBR3Q6ZT12 1888 aa14.76□□□□□ -0.05
CCDC84-210ENST00000583842 A0A087WZG4 1122 aa14.76□□□□□ -0.05
CCDC84-210ENST00000583842 BTBD11A6QL63 1104 aa14.76□□□□□ -0.05
CCDC84-210ENST00000583842 RGL2O15211 777 aa14.76□□□□□ -0.05
CCDC84-210ENST00000583842 TM4SF1P30408 202 aa14.76□□□□□ -0.05
CCDC84-210ENST00000583842 GPR162Q16538 588 aa14.76□□□□□ -0.05
CCDC84-210ENST00000583842 ZNF496Q96IT1 587 aaPredicted RBP14.76□□□□□ -0.05
CCDC84-210ENST00000583842 NARFQ9UHQ1 456 aa14.76□□□□□ -0.05
CCDC84-210ENST00000583842 CICQ96RK0 1608 aaPredicted RBP14.76□□□□□ -0.05
CCDC84-210ENST00000583842 HEG1Q9ULI3 1381 aa14.75□□□□□ -0.05
CCDC84-210ENST00000583842 MYBBP1AQ9BQG0 1328 aaKnown RBP14.75□□□□□ -0.05
CCDC84-210ENST00000583842 ZPR1O75312 459 aa14.75□□□□□ -0.05
CCDC84-210ENST00000583842 MMP10P09238 476 aa14.75□□□□□ -0.05
CCDC84-210ENST00000583842 YY1P25490 414 aa14.75□□□□□ -0.05
CCDC84-210ENST00000583842 EIF5P55010 431 aaKnown RBP14.75□□□□□ -0.05
CCDC84-210ENST00000583842 MSL1Q68DK7 614 aa14.75□□□□□ -0.05
CCDC84-210ENST00000583842 BABAM1Q9NWV8 329 aa14.75□□□□□ -0.05
CCDC84-210ENST00000583842 SOS1Q07889 1333 aaPredicted RBP14.74□□□□□ -0.05
CCDC84-210ENST00000583842 USP42Q9H9J4 1324 aaKnown RBP14.74□□□□□ -0.05
CCDC84-210ENST00000583842 TUBGCP6Q96RT7 1819 aa14.74□□□□□ -0.05
CCDC84-210ENST00000583842 IL6STP40189 918 aaPredicted RBP14.74□□□□□ -0.05
CCDC84-210ENST00000583842 SNRPA1P09661 255 aaKnown RBP14.73□□□□□ -0.05
CCDC84-210ENST00000583842 NFE2L2Q16236 605 aa14.73□□□□□ -0.05
CCDC84-210ENST00000583842 SMIM5Q71RC9 77 aa14.73□□□□□ -0.05
CCDC84-210ENST00000583842 PARP3Q9Y6F1 533 aa14.73□□□□□ -0.05
CCDC84-210ENST00000583842 NLGN2Q8NFZ4 835 aa14.72□□□□□ -0.05
CCDC84-210ENST00000583842 PRKRIP1Q9H875 184 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms