RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 IL16Q14005 1332 aa19.22■□□□□ 0.67
ERBB2-214ENST00000583038 ESPNB1AK53 854 aa19.22■□□□□ 0.67
ERBB2-214ENST00000583038 KIF2AO00139 706 aaPredicted RBP19.22■□□□□ 0.67
ERBB2-214ENST00000583038 TMEM132AQ24JP5 1023 aa19.22■□□□□ 0.67
ERBB2-214ENST00000583038 HYPKQ9NX55 129 aa19.21■□□□□ 0.67
ERBB2-214ENST00000583038 DNAAF4Q8WXU2 420 aa19.21■□□□□ 0.67
ERBB2-214ENST00000583038 PHF8Q9UPP1 1060 aa19.21■□□□□ 0.67
ERBB2-214ENST00000583038 PLB1Q6P1J6 1458 aa19.2■□□□□ 0.66
ERBB2-214ENST00000583038 IQCEQ6IPM2 695 aa19.2■□□□□ 0.66
ERBB2-214ENST00000583038 PDCL3Q9H2J4 239 aa19.2■□□□□ 0.66
ERBB2-214ENST00000583038 GRIN2AQ12879 1464 aa19.2■□□□□ 0.66
ERBB2-214ENST00000583038 H0YHG0 523 aa19.2■□□□□ 0.66
ERBB2-214ENST00000583038 CCDC191Q8NCU4 936 aa19.2■□□□□ 0.66
ERBB2-214ENST00000583038 C11orf95C9JLR9 678 aaPredicted RBP19.19■□□□□ 0.66
ERBB2-214ENST00000583038 CCDC181Q5TID7 509 aa19.19■□□□□ 0.66
ERBB2-214ENST00000583038 NME9Q86XW9 330 aa19.19■□□□□ 0.66
ERBB2-214ENST00000583038 EIF3JO75822 258 aaKnown RBP19.19■□□□□ 0.66
ERBB2-214ENST00000583038 LEKR1Q6ZMV7 388 aa19.19■□□□□ 0.66
ERBB2-214ENST00000583038 TANGO6Q9C0B7 1094 aa19.19■□□□□ 0.66
ERBB2-214ENST00000583038 ADGRF5Q8IZF2 1346 aa19.18■□□□□ 0.66
ERBB2-214ENST00000583038 AXDND1Q5T1B0 1012 aaPredicted RBP19.18■□□□□ 0.66
ERBB2-214ENST00000583038 TMOD3Q9NYL9 352 aa19.18■□□□□ 0.66
ERBB2-214ENST00000583038 GOLGA6L10A6NI86 522 aa19.18■□□□□ 0.66
ERBB2-214ENST00000583038 C14orf93Q9H972 538 aaKnown RBP19.18■□□□□ 0.66
ERBB2-214ENST00000583038 ZHX3Q9H4I2 956 aa19.18■□□□□ 0.66
ERBB2-214ENST00000583038 SF3B2Q13435 895 aaKnown RBP19.18■□□□□ 0.66
ERBB2-214ENST00000583038 IDI1Q13907 227 aa19.17■□□□□ 0.66
ERBB2-214ENST00000583038 PRPF40BQ6NWY9 871 aaKnown RBP19.17■□□□□ 0.66
ERBB2-214ENST00000583038 PHAXQ9H814 394 aaKnown RBP19.17■□□□□ 0.66
ERBB2-214ENST00000583038 CAVIN4Q5BKX8 364 aa19.17■□□□□ 0.66
ERBB2-214ENST00000583038 BMP2KLQ5H9B9 411 aa19.17■□□□□ 0.66
ERBB2-214ENST00000583038 ZSCAN30Q86W11 494 aa19.17■□□□□ 0.66
ERBB2-214ENST00000583038 ANO10Q9NW15 660 aa19.17■□□□□ 0.66
ERBB2-214ENST00000583038 MIS18AQ9NYP9 233 aa19.16■□□□□ 0.66
ERBB2-214ENST00000583038 EMILIN1Q9Y6C2 1016 aa19.16■□□□□ 0.66
ERBB2-214ENST00000583038 MAP3K12Q12852 859 aa19.16■□□□□ 0.66
ERBB2-214ENST00000583038 LIMCH1Q9UPQ0 1083 aa19.16■□□□□ 0.66
ERBB2-214ENST00000583038 ANKRD36BQ8N2N9 1353 aa19.16■□□□□ 0.66
ERBB2-214ENST00000583038 CTAGE5O15320 804 aa19.16■□□□□ 0.66
ERBB2-214ENST00000583038 FILIP1Q7Z7B0 1213 aa19.16■□□□□ 0.66
ERBB2-214ENST00000583038 ABCF2Q9UG63 623 aa19.16■□□□□ 0.66
ERBB2-214ENST00000583038 TRIM27P14373 513 aa19.15■□□□□ 0.66
ERBB2-214ENST00000583038 IFIT5Q13325 482 aaKnown RBP19.15■□□□□ 0.66
ERBB2-214ENST00000583038 TMOD2Q9NZR1 351 aa19.15■□□□□ 0.66
ERBB2-214ENST00000583038 CCDC83Q8IWF9 413 aa19.15■□□□□ 0.66
ERBB2-214ENST00000583038 CCDC183Q5T5S1 534 aa19.15■□□□□ 0.66
ERBB2-214ENST00000583038 NAPBQ9H115 298 aa19.15■□□□□ 0.66
ERBB2-214ENST00000583038 RNF41Q9H4P4 317 aaPredicted RBP19.15■□□□□ 0.66
ERBB2-214ENST00000583038 NUTM2BA6NNL0 878 aaPredicted RBP19.15■□□□□ 0.66
ERBB2-214ENST00000583038 NUTM2EB1AL46 878 aaPredicted RBP19.15■□□□□ 0.66
ERBB2-214ENST00000583038 FLIIQ13045 1269 aa19.15■□□□□ 0.66
ERBB2-214ENST00000583038 NUTM2AQ8IVF1 878 aaPredicted RBP19.15■□□□□ 0.66
ERBB2-214ENST00000583038 DDX11Q96FC9 970 aa19.14■□□□□ 0.66
ERBB2-214ENST00000583038 BOLA2Q9H3K6 86 aa19.14■□□□□ 0.66
ERBB2-214ENST00000583038 AMOTL2Q9Y2J4 779 aa19.14■□□□□ 0.66
ERBB2-214ENST00000583038 MYD88Q99836 296 aa19.14■□□□□ 0.65
ERBB2-214ENST00000583038 EPB41L2O43491 1005 aaKnown RBP19.14■□□□□ 0.65
ERBB2-214ENST00000583038 XPCQ01831 940 aaPredicted RBP19.14■□□□□ 0.65
ERBB2-214ENST00000583038 PDCL2Q8N4E4 241 aa19.14■□□□□ 0.65
ERBB2-214ENST00000583038 ECHDC1Q9NTX5 307 aa19.14■□□□□ 0.65
ERBB2-214ENST00000583038 STK11IPQ8N1F8 1099 aa19.14■□□□□ 0.65
ERBB2-214ENST00000583038 ARHGAP45Q92619 1136 aa19.14■□□□□ 0.65
ERBB2-214ENST00000583038 TEX13AQ9BXU3 409 aaPredicted RBP19.14■□□□□ 0.65
ERBB2-214ENST00000583038 ZSCAN29Q8IWY8 852 aaPredicted RBP19.13■□□□□ 0.65
ERBB2-214ENST00000583038 PTCD1O75127 700 aaKnown RBP19.13■□□□□ 0.65
ERBB2-214ENST00000583038 RBM5P52756 815 aaKnown RBP eCLIP19.13■□□□□ 0.652e-9■■■□□ 18.6
ERBB2-214ENST00000583038 C20orf194Q5TEA3 1177 aa19.13■□□□□ 0.65
ERBB2-214ENST00000583038 EVI5LQ96CN4 794 aa19.13■□□□□ 0.65
ERBB2-214ENST00000583038 SSBP05455 408 aaKnown RBP eCLIP19.13■□□□□ 0.65
ERBB2-214ENST00000583038 CFAP100Q494V2 611 aa19.13■□□□□ 0.65
ERBB2-214ENST00000583038 C8orf76Q96K31 380 aa19.13■□□□□ 0.65
ERBB2-214ENST00000583038 LRRFIP2Q9Y608 721 aaKnown RBP19.13■□□□□ 0.65
ERBB2-214ENST00000583038 SFPQP23246 707 aaKnown RBP eCLIP19.12■□□□□ 0.65
ERBB2-214ENST00000583038 EIF5P55010 431 aaKnown RBP19.12■□□□□ 0.65
ERBB2-214ENST00000583038 ARHGAP29Q52LW3 1261 aa19.12■□□□□ 0.65
ERBB2-214ENST00000583038 CTCFLQ8NI51 663 aaPredicted RBP19.12■□□□□ 0.65
ERBB2-214ENST00000583038 FERMT3Q86UX7 667 aa19.12■□□□□ 0.65
ERBB2-214ENST00000583038 IQCA1Q86XH1 822 aa19.12■□□□□ 0.65
ERBB2-214ENST00000583038 SYCE3A1L190 88 aa19.12■□□□□ 0.65
ERBB2-214ENST00000583038 SMARCA5O60264 1052 aaPredicted RBP19.11■□□□□ 0.65
ERBB2-214ENST00000583038 PPP1R12BO60237 982 aaPredicted RBP19.11■□□□□ 0.65
ERBB2-214ENST00000583038 NOS1P29475 1434 aa19.11■□□□□ 0.65
ERBB2-214ENST00000583038 DENND4BO75064 1496 aaPredicted RBP19.11■□□□□ 0.65
ERBB2-214ENST00000583038 SLC5A1P13866 664 aa19.11■□□□□ 0.65
ERBB2-214ENST00000583038 ZNF397Q8NF99 534 aaPredicted RBP19.11■□□□□ 0.65
ERBB2-214ENST00000583038 ZNF76P36508 570 aa19.1■□□□□ 0.65
ERBB2-214ENST00000583038 ANKRD18AQ8IVF6 992 aa19.1■□□□□ 0.65
ERBB2-214ENST00000583038 RAB34Q9BZG1 259 aa19.1■□□□□ 0.65
ERBB2-214ENST00000583038 DDX19AQ9NUU7 478 aaKnown RBP19.1■□□□□ 0.65
ERBB2-214ENST00000583038 SEC63Q9UGP8 760 aaKnown RBP19.1■□□□□ 0.65
ERBB2-214ENST00000583038 PIK3R4Q99570 1358 aa19.1■□□□□ 0.65
ERBB2-214ENST00000583038 ZSCAN12O43309 604 aa19.1■□□□□ 0.65
ERBB2-214ENST00000583038 CCDC85AQ96PX6 553 aaPredicted RBP19.1■□□□□ 0.65
ERBB2-214ENST00000583038 BCL11BQ9C0K0 894 aaPredicted RBP19.1■□□□□ 0.65
ERBB2-214ENST00000583038 GBP3Q9H0R5 595 aa19.1■□□□□ 0.65
ERBB2-214ENST00000583038 TSPYL1Q9H0U9 437 aa19.1■□□□□ 0.65
ERBB2-214ENST00000583038 RALGAPBQ86X10 1494 aa19.1■□□□□ 0.65
ERBB2-214ENST00000583038 DCAF8L1A6NGE4 600 aa19.1■□□□□ 0.65
ERBB2-214ENST00000583038 ZRSR2Q15696 482 aaKnown RBP19.1■□□□□ 0.65
ERBB2-214ENST00000583038 F6X3S4 739 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms