RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 RNMTO43148 476 aaKnown RBP16.79■□□□□ 0.28
SMARCE1-218ENST00000582955 SIK1P57059 783 aa16.79■□□□□ 0.28
SMARCE1-218ENST00000582955 PHACTR3Q96KR7 559 aa16.79■□□□□ 0.28
SMARCE1-218ENST00000582955 PDGFDQ9GZP0 370 aaPredicted RBP16.79■□□□□ 0.28
SMARCE1-218ENST00000582955 PRKRIP1Q9H875 184 aaPredicted RBP16.79■□□□□ 0.28
SMARCE1-218ENST00000582955 TFCP2L1Q9NZI6 479 aa16.79■□□□□ 0.28
SMARCE1-218ENST00000582955 C5P01031 1676 aa16.78■□□□□ 0.28
SMARCE1-218ENST00000582955 LRP5O75197 1615 aa16.78■□□□□ 0.28
SMARCE1-218ENST00000582955 RBM42Q9BTD8 480 aaKnown RBP16.78■□□□□ 0.28
SMARCE1-218ENST00000582955 CASZ1Q86V15 1759 aa16.77■□□□□ 0.28
SMARCE1-218ENST00000582955 GNAT3A8MTJ3 354 aa16.77■□□□□ 0.28
SMARCE1-218ENST00000582955 NEFMP07197 916 aa16.77■□□□□ 0.28
SMARCE1-218ENST00000582955 HMGB2P26583 209 aaKnown RBP16.77■□□□□ 0.28
SMARCE1-218ENST00000582955 SLC52A2Q9HAB3 445 aa16.77■□□□□ 0.28
SMARCE1-218ENST00000582955 VIRMAQ69YN4 1812 aaKnown RBP16.76■□□□□ 0.27
SMARCE1-218ENST00000582955 ZBTB7AO95365 584 aa16.76■□□□□ 0.27
SMARCE1-218ENST00000582955 ATP6V1AP38606 617 aa16.76■□□□□ 0.27
SMARCE1-218ENST00000582955 SPON1Q9HCB6 807 aa16.76■□□□□ 0.27
SMARCE1-218ENST00000582955 TAF1LQ8IZX4 1826 aa16.75■□□□□ 0.27
SMARCE1-218ENST00000582955 MRC1P22897 1456 aa16.75■□□□□ 0.27
SMARCE1-218ENST00000582955 ADAMTS7Q9UKP4 1686 aa16.75■□□□□ 0.27
SMARCE1-218ENST00000582955 PNPLA7Q6ZV29 1317 aa16.74■□□□□ 0.27
SMARCE1-218ENST00000582955 PTCD1O75127 700 aaKnown RBP16.74■□□□□ 0.27
SMARCE1-218ENST00000582955 TEFQ10587 303 aa16.74■□□□□ 0.27
SMARCE1-218ENST00000582955 AK7Q96M32 723 aa16.74■□□□□ 0.27
SMARCE1-218ENST00000582955 PNNQ9H307 717 aaKnown RBP16.74■□□□□ 0.27
SMARCE1-218ENST00000582955 C4BP0C0L5 1744 aa16.73■□□□□ 0.27
SMARCE1-218ENST00000582955 TUBGCP6Q96RT7 1819 aa16.73■□□□□ 0.27
SMARCE1-218ENST00000582955 ITPK1Q13572 414 aa16.73■□□□□ 0.27
SMARCE1-218ENST00000582955 LINC00116Q8NCU8 138 aa16.73■□□□□ 0.27
SMARCE1-218ENST00000582955 IL17REQ8NFR9 667 aa16.73■□□□□ 0.27
SMARCE1-218ENST00000582955 RTF1Q92541 710 aaKnown RBP16.73■□□□□ 0.27
SMARCE1-218ENST00000582955 ATF5Q9Y2D1 282 aaPredicted RBP16.73■□□□□ 0.27
SMARCE1-218ENST00000582955 QSER1Q2KHR3 1735 aa16.73■□□□□ 0.27
SMARCE1-218ENST00000582955 MAPK8IP3Q9UPT6 1336 aa16.72■□□□□ 0.27
SMARCE1-218ENST00000582955 SLC39A6Q13433 755 aa16.71■□□□□ 0.27
SMARCE1-218ENST00000582955 WDR43Q15061 677 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMARCE1-218ENST00000582955 SLC4A9Q96Q91 983 aa16.71■□□□□ 0.27
SMARCE1-218ENST00000582955 MTFR1LQ9H019 292 aa16.71■□□□□ 0.27
SMARCE1-218ENST00000582955 PPP1R1BQ9UD71 204 aaPredicted RBP16.71■□□□□ 0.27
SMARCE1-218ENST00000582955 PLEKHF1Q96S99 279 aa16.7■□□□□ 0.26
SMARCE1-218ENST00000582955 GNPATO15228 680 aa16.69■□□□□ 0.26
SMARCE1-218ENST00000582955 PHF14O94880 888 aa16.69■□□□□ 0.26
SMARCE1-218ENST00000582955 MCM10Q7L590 875 aa16.69■□□□□ 0.26
SMARCE1-218ENST00000582955 COL23A1Q86Y22 540 aaPredicted RBP16.69■□□□□ 0.26
SMARCE1-218ENST00000582955 SLC16A10Q8TF71 515 aa16.69■□□□□ 0.26
SMARCE1-218ENST00000582955 ZNF831Q5JPB2 1677 aa16.69■□□□□ 0.26
SMARCE1-218ENST00000582955 CEMIPQ8WUJ3 1361 aa16.68■□□□□ 0.26
SMARCE1-218ENST00000582955 ANP32CO43423 234 aa16.68■□□□□ 0.26
SMARCE1-218ENST00000582955 DCTN1Q14203 1278 aa16.68■□□□□ 0.26
SMARCE1-218ENST00000582955 NFE2L2Q16236 605 aa16.68■□□□□ 0.26
SMARCE1-218ENST00000582955 TTC5Q8N0Z6 440 aa16.68■□□□□ 0.26
SMARCE1-218ENST00000582955 FLAD1Q8NFF5 587 aa16.68■□□□□ 0.26
SMARCE1-218ENST00000582955 HTATSF1O43719 755 aaKnown RBP16.67■□□□□ 0.26
SMARCE1-218ENST00000582955 SMIM5Q71RC9 77 aa16.67■□□□□ 0.26
SMARCE1-218ENST00000582955 KCPQ6ZWJ8 1503 aa16.66■□□□□ 0.26
SMARCE1-218ENST00000582955 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.66■□□□□ 0.26
SMARCE1-218ENST00000582955 BTBD11A6QL63 1104 aa16.66■□□□□ 0.26
SMARCE1-218ENST00000582955 COL5A3P25940 1745 aaPredicted RBP16.66■□□□□ 0.26
SMARCE1-218ENST00000582955 SSFA2P28290 1259 aa16.66■□□□□ 0.26
SMARCE1-218ENST00000582955 PTGER2P43116 358 aa16.66■□□□□ 0.26
SMARCE1-218ENST00000582955 UBR3Q6ZT12 1888 aa16.66■□□□□ 0.26
SMARCE1-218ENST00000582955 AMIGO3Q86WK7 504 aa16.66■□□□□ 0.26
SMARCE1-218ENST00000582955 CCDC146Q8IYE0 955 aa16.66■□□□□ 0.26
SMARCE1-218ENST00000582955 SIPA1L3O60292 1781 aaPredicted RBP16.66■□□□□ 0.26
SMARCE1-218ENST00000582955 CNTNAP4Q9C0A0 1308 aa16.66■□□□□ 0.26
SMARCE1-218ENST00000582955 TJP1Q07157 1748 aa16.65■□□□□ 0.26
SMARCE1-218ENST00000582955 ZNF790Q6PG37 636 aa16.65■□□□□ 0.26
SMARCE1-218ENST00000582955 DNAJC10Q8IXB1 793 aa16.65■□□□□ 0.26
SMARCE1-218ENST00000582955 RTCBQ9Y3I0 505 aaKnown RBP16.65■□□□□ 0.26
SMARCE1-218ENST00000582955 DLG5Q8TDM6 1919 aa16.64■□□□□ 0.26
SMARCE1-218ENST00000582955 POLD1P28340 1107 aa16.64■□□□□ 0.25
SMARCE1-218ENST00000582955 RC3H1Q5TC82 1133 aaKnown RBP16.64■□□□□ 0.25
SMARCE1-218ENST00000582955 ADAMTS8Q9UP79 889 aa16.64■□□□□ 0.25
SMARCE1-218ENST00000582955 CICQ96RK0 1608 aaPredicted RBP16.63■□□□□ 0.25
SMARCE1-218ENST00000582955 CRKLP46109 303 aaKnown RBP16.63■□□□□ 0.25
SMARCE1-218ENST00000582955 MSL1Q68DK7 614 aa16.63■□□□□ 0.25
SMARCE1-218ENST00000582955 UBR2Q8IWV8 1755 aa16.63■□□□□ 0.25
SMARCE1-218ENST00000582955 RIPK4P57078 832 aa16.62■□□□□ 0.25
SMARCE1-218ENST00000582955 VSIG10Q8N0Z9 540 aa16.62■□□□□ 0.25
SMARCE1-218ENST00000582955 RUNDC1Q96C34 613 aa16.62■□□□□ 0.25
SMARCE1-218ENST00000582955 ZNF496Q96IT1 587 aaPredicted RBP16.62■□□□□ 0.25
SMARCE1-218ENST00000582955 FMNL2Q96PY5 1086 aa16.62■□□□□ 0.25
SMARCE1-218ENST00000582955 SGIP1Q9BQI5 828 aa16.62■□□□□ 0.25
SMARCE1-218ENST00000582955 RNF39Q9H2S5 420 aa16.62■□□□□ 0.25
SMARCE1-218ENST00000582955 KCNQ3O43525 872 aa16.61■□□□□ 0.25
SMARCE1-218ENST00000582955 RPS6KA4O75676 772 aa16.61■□□□□ 0.25
SMARCE1-218ENST00000582955 TMPOP42166 694 aaKnown RBP16.61■□□□□ 0.25
SMARCE1-218ENST00000582955 TRAPPC3LQ5T215 181 aa16.61■□□□□ 0.25
SMARCE1-218ENST00000582955 ARXQ96QS3 562 aa16.61■□□□□ 0.25
SMARCE1-218ENST00000582955 THUMPD2Q9BTF0 503 aaKnown RBP16.61■□□□□ 0.25
SMARCE1-218ENST00000582955 RRP7AQ9Y3A4 280 aaKnown RBP16.61■□□□□ 0.25
SMARCE1-218ENST00000582955 HEG1Q9ULI3 1381 aa16.61■□□□□ 0.25
SMARCE1-218ENST00000582955 CYP19A1P11511 503 aaPredicted RBP16.6■□□□□ 0.25
SMARCE1-218ENST00000582955 TAF7Q15545 349 aaPredicted RBP16.6■□□□□ 0.25
SMARCE1-218ENST00000582955 NEUROD2Q15784 382 aa16.6■□□□□ 0.25
SMARCE1-218ENST00000582955 CCDC184Q52MB2 194 aa16.6■□□□□ 0.25
SMARCE1-218ENST00000582955 CCDC87Q9NVE4 849 aa16.6■□□□□ 0.25
SMARCE1-218ENST00000582955 MYH14Q7Z406 1995 aaKnown RBP16.6■□□□□ 0.25
SMARCE1-218ENST00000582955 RFC4P35249 363 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms