RNA–Protein interactions for RNA: ENST00000581920.1

TYMS-205, Transcript of thymidylate synthetase, humanhuman

TSL 5

Gene TYMS, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-205ENST00000581920 ST18O60284 1047 aa11.32□□□□□ -0.6
TYMS-205ENST00000581920 YBX3P16989 372 aaKnown RBP eCLIP11.32□□□□□ -0.62e-8■■□□□ 13
TYMS-205ENST00000581920 AMER1Q5JTC6 1135 aaPredicted RBP11.32□□□□□ -0.6
TYMS-205ENST00000581920 ARHGEF25Q86VW2 580 aa11.32□□□□□ -0.6
TYMS-205ENST00000581920 PNPLA7Q6ZV29 1317 aa11.32□□□□□ -0.6
TYMS-205ENST00000581920 ADCY9O60503 1353 aa11.31□□□□□ -0.6
TYMS-205ENST00000581920 POTEMA6NI47 508 aa11.31□□□□□ -0.6
TYMS-205ENST00000581920 POTEGQ6S5H5 508 aa11.31□□□□□ -0.6
TYMS-205ENST00000581920 TFCP2L1Q9NZI6 479 aa11.31□□□□□ -0.6
TYMS-205ENST00000581920 LRRC4BQ9NT99 713 aa11.3□□□□□ -0.6
TYMS-205ENST00000581920 COL18A1P39060 1754 aa11.3□□□□□ -0.6
TYMS-205ENST00000581920 GOLGB1Q14789 3259 aaKnown RBP11.3□□□□□ -0.6
TYMS-205ENST00000581920 IL2RBP14784 551 aa11.29□□□□□ -0.6
TYMS-205ENST00000581920 APLP1P51693 650 aa11.29□□□□□ -0.6
TYMS-205ENST00000581920 QSER1Q2KHR3 1735 aa11.29□□□□□ -0.6
TYMS-205ENST00000581920 CABP1Q9NZU7 370 aa11.28□□□□□ -0.6
TYMS-205ENST00000581920 COL24A1Q17RW2 1714 aa11.28□□□□□ -0.6
TYMS-205ENST00000581920 CENPJQ9HC77 1338 aaPredicted RBP11.28□□□□□ -0.6
TYMS-205ENST00000581920 QRICH2Q9H0J4 1663 aa11.27□□□□□ -0.6
TYMS-205ENST00000581920 ZNF526Q8TF50 670 aaPredicted RBP11.27□□□□□ -0.61
TYMS-205ENST00000581920 CD2APQ9Y5K6 639 aa11.27□□□□□ -0.61
TYMS-205ENST00000581920 ERBB3P21860 1342 aa11.27□□□□□ -0.61
TYMS-205ENST00000581920 TTC21AQ8NDW8 1320 aa11.27□□□□□ -0.61
TYMS-205ENST00000581920 PIK3C2AO00443 1686 aa11.27□□□□□ -0.61
TYMS-205ENST00000581920 BTAF1O14981 1849 aa11.26□□□□□ -0.61
TYMS-205ENST00000581920 NLRP2Q9NX02 1062 aa11.26□□□□□ -0.61
TYMS-205ENST00000581920 HOXB3P14651 431 aaPredicted RBP11.25□□□□□ -0.61
TYMS-205ENST00000581920 HMGB2P26583 209 aaKnown RBP11.25□□□□□ -0.61
TYMS-205ENST00000581920 SNPHO15079 494 aa11.24□□□□□ -0.61
TYMS-205ENST00000581920 TTC21BQ7Z4L5 1316 aa11.24□□□□□ -0.61
TYMS-205ENST00000581920 NFAT5O94916 1531 aa11.24□□□□□ -0.61
TYMS-205ENST00000581920 KIF3CO14782 793 aa11.23□□□□□ -0.61
TYMS-205ENST00000581920 MARVELD3Q96A59 401 aa11.23□□□□□ -0.61
TYMS-205ENST00000581920 KIAA1210Q9ULL0 1709 aa11.23□□□□□ -0.61
TYMS-205ENST00000581920 GTPBP6O43824 516 aaPredicted RBP11.22□□□□□ -0.61
TYMS-205ENST00000581920 EVC2Q86UK5 1308 aa11.22□□□□□ -0.61
TYMS-205ENST00000581920 FLAD1Q8NFF5 587 aa11.22□□□□□ -0.61
TYMS-205ENST00000581920 CCNL1Q9UK58 526 aaPredicted RBP11.22□□□□□ -0.61
TYMS-205ENST00000581920 ANKRD36BQ8N2N9 1353 aa11.21□□□□□ -0.61
TYMS-205ENST00000581920 C2orf72A6NCS6 295 aa11.21□□□□□ -0.61
TYMS-205ENST00000581920 TOMM70O94826 608 aa11.21□□□□□ -0.61
TYMS-205ENST00000581920 SYTL4Q96C24 671 aaPredicted RBP11.21□□□□□ -0.61
TYMS-205ENST00000581920 RAB3GAP2Q9H2M9 1393 aa11.2□□□□□ -0.62
TYMS-205ENST00000581920 MSL1Q68DK7 614 aa11.2□□□□□ -0.62
TYMS-205ENST00000581920 COL23A1Q86Y22 540 aaPredicted RBP11.2□□□□□ -0.62
TYMS-205ENST00000581920 DDX54Q8TDD1 881 aaKnown RBP11.2□□□□□ -0.62
TYMS-205ENST00000581920 DNAJC5GQ8N7S2 189 aa11.19□□□□□ -0.62
TYMS-205ENST00000581920 ANKRD24Q8TF21 1146 aa11.19□□□□□ -0.62
TYMS-205ENST00000581920 RGPD5Q99666 1765 aa11.18□□□□□ -0.62
TYMS-205ENST00000581920 USP31Q70CQ4 1352 aa11.18□□□□□ -0.62
TYMS-205ENST00000581920 KTN1Q86UP2 1357 aaKnown RBP11.18□□□□□ -0.62
TYMS-205ENST00000581920 USP47Q96K76 1375 aa11.18□□□□□ -0.62
TYMS-205ENST00000581920 IGSF1Q8N6C5 1336 aa11.18□□□□□ -0.62
TYMS-205ENST00000581920 PRIM1P49642 420 aaKnown RBP11.18□□□□□ -0.62
TYMS-205ENST00000581920 PRELPP51888 382 aa11.18□□□□□ -0.62
TYMS-205ENST00000581920 KCNQ4P56696 695 aa11.18□□□□□ -0.62
TYMS-205ENST00000581920 TNS4Q8IZW8 715 aa11.18□□□□□ -0.62
TYMS-205ENST00000581920 TUBGCP6Q96RT7 1819 aa11.17□□□□□ -0.62
TYMS-205ENST00000581920 NBPF1Q3BBV0 1214 aa11.17□□□□□ -0.62
TYMS-205ENST00000581920 COL13A1Q5TAT6 717 aaPredicted RBP11.17□□□□□ -0.62
TYMS-205ENST00000581920 NSD2O96028 1365 aa11.16□□□□□ -0.62
TYMS-205ENST00000581920 JMYQ8N9B5 988 aa11.16□□□□□ -0.62
TYMS-205ENST00000581920 KLRG1Q96E93 195 aa11.16□□□□□ -0.62
TYMS-205ENST00000581920 NSD3Q9BZ95 1437 aa11.16□□□□□ -0.62
TYMS-205ENST00000581920 CICQ96RK0 1608 aaPredicted RBP11.15□□□□□ -0.62
TYMS-205ENST00000581920 LY75O60449 1722 aa11.15□□□□□ -0.63
TYMS-205ENST00000581920 C16orf71Q8IYS4 520 aaPredicted RBP11.14□□□□□ -0.63
TYMS-205ENST00000581920 RBM46Q8TBY0 533 aaKnown RBP11.14□□□□□ -0.63
TYMS-205ENST00000581920 KAT6BQ8WYB5 2073 aa11.13□□□□□ -0.63
TYMS-205ENST00000581920 DOK7Q18PE1 504 aa11.13□□□□□ -0.63
TYMS-205ENST00000581920 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.13□□□□□ -0.63
TYMS-205ENST00000581920 ZNF710Q8N1W2 664 aa11.13□□□□□ -0.63
TYMS-205ENST00000581920 TMC2Q8TDI7 906 aa11.13□□□□□ -0.63
TYMS-205ENST00000581920 DOT1LQ8TEK3 1739 aa11.12□□□□□ -0.63
TYMS-205ENST00000581920 FSTL1Q12841 308 aa11.12□□□□□ -0.63
TYMS-205ENST00000581920 AK7Q96M32 723 aa11.12□□□□□ -0.63
TYMS-205ENST00000581920 USP54Q70EL1 1684 aa11.11□□□□□ -0.63
TYMS-205ENST00000581920 FAM208AQ9UK61 1670 aaKnown RBP11.11□□□□□ -0.63
TYMS-205ENST00000581920 POTEB3A0JP26 581 aa11.11□□□□□ -0.63
TYMS-205ENST00000581920 POTEBQ6S5H4 581 aa11.11□□□□□ -0.63
TYMS-205ENST00000581920 ZCRB1Q8TBF4 217 aaKnown RBP11.11□□□□□ -0.63
TYMS-205ENST00000581920 IP6K1Q92551 441 aa11.11□□□□□ -0.63
TYMS-205ENST00000581920 KHSRPQ92945 711 aaKnown RBP eCLIP11.11□□□□□ -0.63
TYMS-205ENST00000581920 WWC3Q9ULE0 1092 aa11.11□□□□□ -0.63
TYMS-205ENST00000581920 PLEKHG2Q9H7P9 1386 aa11.11□□□□□ -0.63
TYMS-205ENST00000581920 CGNL1Q0VF96 1302 aa11.1□□□□□ -0.63
TYMS-205ENST00000581920 WDR90Q96KV7 1748 aa11.1□□□□□ -0.63
TYMS-205ENST00000581920 EMP3P54852 163 aa11.1□□□□□ -0.63
TYMS-205ENST00000581920 NME9Q86XW9 330 aa11.1□□□□□ -0.63
TYMS-205ENST00000581920 PALLDQ8WX93 1383 aa11.1□□□□□ -0.63
TYMS-205ENST00000581920 MON2Q7Z3U7 1717 aa11.09□□□□□ -0.63
TYMS-205ENST00000581920 SBNO2Q9Y2G9 1366 aa11.09□□□□□ -0.63
TYMS-205ENST00000581920 SSFA2P28290 1259 aa11.09□□□□□ -0.63
TYMS-205ENST00000581920 HDGFL2Q7Z4V5 671 aaPredicted RBP11.09□□□□□ -0.63
TYMS-205ENST00000581920 LTV1Q96GA3 475 aaPredicted RBP11.09□□□□□ -0.63
TYMS-205ENST00000581920 NMRK2Q9NPI5 230 aa11.09□□□□□ -0.63
TYMS-205ENST00000581920 LTN1O94822 1766 aa11.08□□□□□ -0.64
TYMS-205ENST00000581920 C5P01031 1676 aa11.08□□□□□ -0.64
TYMS-205ENST00000581920 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.08□□□□□ -0.64
TYMS-205ENST00000581920 FAM205CA6NFA0 338 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms