RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 ERBB3P21860 1342 aa18.69■□□□□ 0.58
MKS1-211ENST00000581761 MVPQ14764 893 aaKnown RBP18.68■□□□□ 0.58
MKS1-211ENST00000581761 CENPQQ7L2Z9 268 aaPredicted RBP18.68■□□□□ 0.58
MKS1-211ENST00000581761 KDM2BQ8NHM5 1336 aa18.68■□□□□ 0.58
MKS1-211ENST00000581761 FAM98CQ17RN3 349 aaKnown RBP18.67■□□□□ 0.58
MKS1-211ENST00000581761 AMOTQ4VCS5 1084 aa18.67■□□□□ 0.58
MKS1-211ENST00000581761 ZNF530Q6P9A1 599 aaPredicted RBP18.67■□□□□ 0.58
MKS1-211ENST00000581761 IL17REQ8NFR9 667 aa18.67■□□□□ 0.58
MKS1-211ENST00000581761 MIS18AQ9NYP9 233 aa18.67■□□□□ 0.58
MKS1-211ENST00000581761 USP35Q9P2H5 1018 aa18.67■□□□□ 0.58
MKS1-211ENST00000581761 TCERG1O14776 1098 aaKnown RBP18.66■□□□□ 0.58
MKS1-211ENST00000581761 CSB-PGBD3P0DP91 1061 aa18.66■□□□□ 0.58
MKS1-211ENST00000581761 SEPT12Q8IYM1 358 aa18.66■□□□□ 0.58
MKS1-211ENST00000581761 NLRP2Q9NX02 1062 aa18.66■□□□□ 0.58
MKS1-211ENST00000581761 A0A0G2JS52 829 aa18.65■□□□□ 0.58
MKS1-211ENST00000581761 MYT1Q01538 1121 aa18.65■□□□□ 0.58
MKS1-211ENST00000581761 KRT24Q2M2I5 525 aa18.65■□□□□ 0.58
MKS1-211ENST00000581761 AKAP4Q5JQC9 854 aa18.65■□□□□ 0.58
MKS1-211ENST00000581761 WDR17Q8IZU2 1322 aa18.65■□□□□ 0.58
MKS1-211ENST00000581761 ITPRIPQ8IWB1 547 aa18.64■□□□□ 0.57
MKS1-211ENST00000581761 TMEM57Q8N5G2 664 aa18.64■□□□□ 0.57
MKS1-211ENST00000581761 ARHGAP45Q92619 1136 aa18.64■□□□□ 0.57
MKS1-211ENST00000581761 BABAM1Q9NWV8 329 aa18.64■□□□□ 0.57
MKS1-211ENST00000581761 TAF7Q15545 349 aaPredicted RBP18.63■□□□□ 0.57
MKS1-211ENST00000581761 C1orf141Q5JVX7 400 aa18.63■□□□□ 0.57
MKS1-211ENST00000581761 TOM1L2Q6ZVM7 507 aa18.63■□□□□ 0.57
MKS1-211ENST00000581761 DDX19BQ9UMR2 479 aa18.63■□□□□ 0.57
MKS1-211ENST00000581761 FAM208AQ9UK61 1670 aaKnown RBP18.63■□□□□ 0.57
MKS1-211ENST00000581761 BARGINQ6ZT62 677 aa18.62■□□□□ 0.57
MKS1-211ENST00000581761 CEMIPQ8WUJ3 1361 aa18.61■□□□□ 0.57
MKS1-211ENST00000581761 TATP17735 454 aaPredicted RBP18.61■□□□□ 0.57
MKS1-211ENST00000581761 RAPGEF4Q8WZA2 1011 aa18.61■□□□□ 0.57
MKS1-211ENST00000581761 API5Q9BZZ5 524 aaKnown RBP18.61■□□□□ 0.57
MKS1-211ENST00000581761 BRWD3Q6RI45 1802 aa18.6■□□□□ 0.57
MKS1-211ENST00000581761 CARD10Q9BWT7 1032 aa18.6■□□□□ 0.57
MKS1-211ENST00000581761 LGR6Q9HBX8 967 aa18.6■□□□□ 0.57
MKS1-211ENST00000581761 THSD7AQ9UPZ6 1657 aa18.6■□□□□ 0.57
MKS1-211ENST00000581761 RNMTO43148 476 aaKnown RBP18.59■□□□□ 0.57
MKS1-211ENST00000581761 THRAP3Q9Y2W1 955 aaKnown RBP18.59■□□□□ 0.57
MKS1-211ENST00000581761 OVOS2A0A0G2JMS6 1433 aa18.58■□□□□ 0.57
MKS1-211ENST00000581761 IGHDP01880 384 aa18.58■□□□□ 0.56
MKS1-211ENST00000581761 MPRIPQ6WCQ1 1025 aa18.58■□□□□ 0.56
MKS1-211ENST00000581761 KRT27Q7Z3Y8 459 aa18.58■□□□□ 0.56
MKS1-211ENST00000581761 PCDHB15Q9Y5E8 787 aa18.58■□□□□ 0.56
MKS1-211ENST00000581761 ABCC4O15439 1325 aa18.57■□□□□ 0.56
MKS1-211ENST00000581761 TEFQ10587 303 aa18.57■□□□□ 0.56
MKS1-211ENST00000581761 SOS1Q07889 1333 aaPredicted RBP18.56■□□□□ 0.56
MKS1-211ENST00000581761 MEGF6O75095 1541 aa18.56■□□□□ 0.56
MKS1-211ENST00000581761 CCDC125Q86Z20 511 aa18.56■□□□□ 0.56
MKS1-211ENST00000581761 SPG7Q9UQ90 795 aa18.56■□□□□ 0.56
MKS1-211ENST00000581761 PLEKHG2Q9H7P9 1386 aa18.55■□□□□ 0.56
MKS1-211ENST00000581761 FAM182BQ5T319 152 aa18.55■□□□□ 0.56
MKS1-211ENST00000581761 CHMP4BQ9H444 224 aaKnown RBP18.55■□□□□ 0.56
MKS1-211ENST00000581761 RWDD1Q9H446 243 aaPredicted RBP18.55■□□□□ 0.56
MKS1-211ENST00000581761 RBM19Q9Y4C8 960 aaKnown RBP18.55■□□□□ 0.56
MKS1-211ENST00000581761 DISP2A7MBM2 1401 aa18.55■□□□□ 0.56
MKS1-211ENST00000581761 PTPRCP08575 1304 aa18.53■□□□□ 0.56
MKS1-211ENST00000581761 KDM3BQ7LBC6 1761 aa18.53■□□□□ 0.56
MKS1-211ENST00000581761 BTBD11A6QL63 1104 aa18.53■□□□□ 0.56
MKS1-211ENST00000581761 SKAP1Q86WV1 359 aa18.53■□□□□ 0.56
MKS1-211ENST00000581761 STK31Q9BXU1 1019 aa18.53■□□□□ 0.56
MKS1-211ENST00000581761 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.53■□□□□ 0.56
MKS1-211ENST00000581761 SLC4A2P04920 1241 aa18.52■□□□□ 0.56
MKS1-211ENST00000581761 CCDC30Q5VVM6 783 aa18.52■□□□□ 0.56
MKS1-211ENST00000581761 ZBTB40Q9NUA8 1239 aa18.52■□□□□ 0.56
MKS1-211ENST00000581761 EIF4A1P60842 406 aaKnown RBP18.51■□□□□ 0.55
MKS1-211ENST00000581761 SF3B2Q13435 895 aaKnown RBP18.51■□□□□ 0.55
MKS1-211ENST00000581761 VIRMAQ69YN4 1812 aaKnown RBP18.51■□□□□ 0.55
MKS1-211ENST00000581761 ADAMTS7Q9UKP4 1686 aa18.5■□□□□ 0.55
MKS1-211ENST00000581761 SRCAPQ6ZRS2 3230 aa18.5■□□□□ 0.55
MKS1-211ENST00000581761 PHKG2P15735 406 aa18.5■□□□□ 0.55
MKS1-211ENST00000581761 IFNL2Q8IZJ0 200 aa18.5■□□□□ 0.55
MKS1-211ENST00000581761 PKD1L3Q7Z443 1732 aa18.49■□□□□ 0.55
MKS1-211ENST00000581761 ZBTB7BO15156 539 aaPredicted RBP18.49■□□□□ 0.55
MKS1-211ENST00000581761 KCNQ3O43525 872 aa18.49■□□□□ 0.55
MKS1-211ENST00000581761 G2E3Q7L622 706 aa18.49■□□□□ 0.55
MKS1-211ENST00000581761 NECTIN2Q92692 538 aa18.49■□□□□ 0.55
MKS1-211ENST00000581761 PARP4Q9UKK3 1724 aaKnown RBP18.49■□□□□ 0.55
MKS1-211ENST00000581761 HOXB7P09629 217 aa18.48■□□□□ 0.55
MKS1-211ENST00000581761 IL2RBP14784 551 aa18.48■□□□□ 0.55
MKS1-211ENST00000581761 HDAC1Q13547 482 aaPredicted RBP18.48■□□□□ 0.55
MKS1-211ENST00000581761 HDGFL1Q5TGJ6 251 aa18.48■□□□□ 0.55
MKS1-211ENST00000581761 INTS3Q68E01 1043 aaKnown RBP18.48■□□□□ 0.55
MKS1-211ENST00000581761 CDCA7Q9BWT1 371 aaPredicted RBP18.48■□□□□ 0.55
MKS1-211ENST00000581761 KDM6AO15550 1401 aaPredicted RBP18.48■□□□□ 0.55
MKS1-211ENST00000581761 WNK3Q9BYP7 1800 aa18.47■□□□□ 0.55
MKS1-211ENST00000581761 RGS3P49796 1198 aa18.47■□□□□ 0.55
MKS1-211ENST00000581761 DDB1Q16531 1140 aa18.47■□□□□ 0.55
MKS1-211ENST00000581761 CHMP4AQ9BY43 222 aa18.47■□□□□ 0.55
MKS1-211ENST00000581761 SIPA1L3O60292 1781 aaPredicted RBP18.47■□□□□ 0.55
MKS1-211ENST00000581761 HSP90AB1P08238 724 aaKnown RBP18.46■□□□□ 0.55
MKS1-211ENST00000581761 DEFB132Q7Z7B7 95 aa18.46■□□□□ 0.55
MKS1-211ENST00000581761 MARCH10Q8NA82 808 aaPredicted RBP18.46■□□□□ 0.55
MKS1-211ENST00000581761 SCN11AQ9UI33 1791 aa18.45■□□□□ 0.54
MKS1-211ENST00000581761 SLC52A2Q9HAB3 445 aa18.45■□□□□ 0.54
MKS1-211ENST00000581761 EXOC5O00471 708 aa18.44■□□□□ 0.54
MKS1-211ENST00000581761 CYP27B1O15528 508 aa18.44■□□□□ 0.54
MKS1-211ENST00000581761 EIF2S2P20042 333 aaKnown RBP18.44■□□□□ 0.54
MKS1-211ENST00000581761 FLIIQ13045 1269 aa18.44■□□□□ 0.54
MKS1-211ENST00000581761 DCAF5Q96JK2 942 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms