RNA–Protein interactions for RNA: ENST00000581671.1

CTC1-208, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-208ENST00000581671 LINC00116Q8NCU8 138 aa13.79□□□□□ -0.2
CTC1-208ENST00000581671 TIAM2Q8IVF5 1701 aa13.78□□□□□ -0.2
CTC1-208ENST00000581671 TMEM88BA6NKF7 163 aa13.78□□□□□ -0.2
CTC1-208ENST00000581671 GNPATO15228 680 aa13.78□□□□□ -0.2
CTC1-208ENST00000581671 MPRIPQ6WCQ1 1025 aa13.78□□□□□ -0.2
CTC1-208ENST00000581671 TMF1P82094 1093 aa13.77□□□□□ -0.21
CTC1-208ENST00000581671 ZNF692Q9BU19 519 aaPredicted RBP13.77□□□□□ -0.21
CTC1-208ENST00000581671 FAM208AQ9UK61 1670 aaKnown RBP13.76□□□□□ -0.21
CTC1-208ENST00000581671 MEGF6O75095 1541 aa13.76□□□□□ -0.21
CTC1-208ENST00000581671 SMARCC1Q92922 1105 aaPredicted RBP13.76□□□□□ -0.21
CTC1-208ENST00000581671 LTV1Q96GA3 475 aaPredicted RBP13.76□□□□□ -0.21
CTC1-208ENST00000581671 PARP3Q9Y6F1 533 aa13.76□□□□□ -0.21
CTC1-208ENST00000581671 CASP8AP2Q9UKL3 1982 aa13.76□□□□□ -0.21
CTC1-208ENST00000581671 MAP2P11137 1827 aaKnown RBP13.76□□□□□ -0.21
CTC1-208ENST00000581671 WDR33Q9C0J8 1336 aaKnown RBP13.75□□□□□ -0.21
CTC1-208ENST00000581671 RASSF10A6NK89 507 aa13.75□□□□□ -0.21
CTC1-208ENST00000581671 CHRNA5P30532 468 aa13.75□□□□□ -0.21
CTC1-208ENST00000581671 DEFB115Q30KQ5 88 aa13.75□□□□□ -0.21
CTC1-208ENST00000581671 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
CTC1-208ENST00000581671 ITGB4P16144 1822 aa13.74□□□□□ -0.21
CTC1-208ENST00000581671 RAB3GAP2Q9H2M9 1393 aa13.73□□□□□ -0.21
CTC1-208ENST00000581671 TSKSQ9UJT2 592 aa13.73□□□□□ -0.21
CTC1-208ENST00000581671 RGPD2P0DJD1 1756 aa13.73□□□□□ -0.21
CTC1-208ENST00000581671 USP31Q70CQ4 1352 aa13.72□□□□□ -0.21
CTC1-208ENST00000581671 CENPJQ9HC77 1338 aaPredicted RBP13.72□□□□□ -0.21
CTC1-208ENST00000581671 LOC102724428A0A0B4J2F2 783 aa13.72□□□□□ -0.21
CTC1-208ENST00000581671 ITGBL1O95965 494 aaPredicted RBP13.72□□□□□ -0.21
CTC1-208ENST00000581671 GYS1P13807 737 aa13.72□□□□□ -0.21
CTC1-208ENST00000581671 SIK1P57059 783 aa13.72□□□□□ -0.21
CTC1-208ENST00000581671 ITPK1Q13572 414 aa13.72□□□□□ -0.21
CTC1-208ENST00000581671 TRAPPC3LQ5T215 181 aa13.72□□□□□ -0.21
CTC1-208ENST00000581671 STAC3Q96MF2 364 aa13.72□□□□□ -0.21
CTC1-208ENST00000581671 BEGAINQ9BUH8 593 aa13.72□□□□□ -0.21
CTC1-208ENST00000581671 IP6K1Q92551 441 aa13.71□□□□□ -0.21
CTC1-208ENST00000581671 SOX10P56693 466 aa13.7□□□□□ -0.22
CTC1-208ENST00000581671 DGKZQ13574 1117 aa13.7□□□□□ -0.22
CTC1-208ENST00000581671 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.7□□□□□ -0.22
CTC1-208ENST00000581671 KTN1Q86UP2 1357 aaKnown RBP13.7□□□□□ -0.22
CTC1-208ENST00000581671 THSD7BQ9C0I4 1608 aa13.69□□□□□ -0.22
CTC1-208ENST00000581671 LDHDQ86WU2 507 aa13.69□□□□□ -0.22
CTC1-208ENST00000581671 PIGBQ92521 554 aa13.69□□□□□ -0.22
CTC1-208ENST00000581671 NME9Q86XW9 330 aa13.68□□□□□ -0.22
CTC1-208ENST00000581671 ARHGEF1Q92888 912 aaKnown RBP13.68□□□□□ -0.22
CTC1-208ENST00000581671 RTCBQ9Y3I0 505 aaKnown RBP13.68□□□□□ -0.22
CTC1-208ENST00000581671 DICER1Q9UPY3 1922 aaKnown RBP13.68□□□□□ -0.22
CTC1-208ENST00000581671 CUL9Q8IWT3 2517 aa13.67□□□□□ -0.22
CTC1-208ENST00000581671 NFKBIEO00221 500 aa13.67□□□□□ -0.22
CTC1-208ENST00000581671 ATP6V1AP38606 617 aa13.67□□□□□ -0.22
CTC1-208ENST00000581671 GCC1Q96CN9 775 aa13.67□□□□□ -0.22
CTC1-208ENST00000581671 LTBP1Q14766 1721 aa13.67□□□□□ -0.22
CTC1-208ENST00000581671 CGNL1Q0VF96 1302 aa13.66□□□□□ -0.22
CTC1-208ENST00000581671 ZNF219Q9P2Y4 722 aaPredicted RBP13.66□□□□□ -0.22
CTC1-208ENST00000581671 ABT1Q9ULW3 272 aaKnown RBP13.66□□□□□ -0.22
CTC1-208ENST00000581671 MON2Q7Z3U7 1717 aa13.65□□□□□ -0.22
CTC1-208ENST00000581671 DDNO94850 711 aaPredicted RBP13.65□□□□□ -0.22
CTC1-208ENST00000581671 RFC4P35249 363 aa13.65□□□□□ -0.22
CTC1-208ENST00000581671 DDR1Q08345 913 aa13.65□□□□□ -0.22
CTC1-208ENST00000581671 NBPF1Q3BBV0 1214 aa13.65□□□□□ -0.22
CTC1-208ENST00000581671 HABP4Q5JVS0 413 aaKnown RBP13.65□□□□□ -0.22
CTC1-208ENST00000581671 PCDH11XQ9BZA7 1347 aa13.64□□□□□ -0.23
CTC1-208ENST00000581671 PCDH11YQ9BZA8 1340 aa13.64□□□□□ -0.23
CTC1-208ENST00000581671 ADRA2BP18089 450 aa13.64□□□□□ -0.23
CTC1-208ENST00000581671 ERFEQ4G0M1 354 aa13.64□□□□□ -0.23
CTC1-208ENST00000581671 CAPNS2Q96L46 248 aa13.64□□□□□ -0.23
CTC1-208ENST00000581671 GPR101Q96P66 508 aaPredicted RBP13.64□□□□□ -0.23
CTC1-208ENST00000581671 CD163L1Q9NR16 1453 aa13.63□□□□□ -0.23
CTC1-208ENST00000581671 SCN4AP35499 1836 aa13.63□□□□□ -0.23
CTC1-208ENST00000581671 DLL1O00548 723 aa13.63□□□□□ -0.23
CTC1-208ENST00000581671 CYP27B1O15528 508 aa13.63□□□□□ -0.23
CTC1-208ENST00000581671 RAPGEF4Q8WZA2 1011 aa13.63□□□□□ -0.23
CTC1-208ENST00000581671 TAF1DQ9H5J8 278 aaPredicted RBP13.63□□□□□ -0.23
CTC1-208ENST00000581671 EVC2Q86UK5 1308 aa13.63□□□□□ -0.23
CTC1-208ENST00000581671 IQCA1LA6NCM1 817 aa13.62□□□□□ -0.23
CTC1-208ENST00000581671 GRM1Q13255 1194 aa13.62□□□□□ -0.23
CTC1-208ENST00000581671 NBPF6Q5VWK0 638 aa13.62□□□□□ -0.23
CTC1-208ENST00000581671 PAXIP1Q6ZW49 1069 aaPredicted RBP13.62□□□□□ -0.23
CTC1-208ENST00000581671 USHBP1Q8N6Y0 703 aa13.62□□□□□ -0.23
CTC1-208ENST00000581671 NBPF4Q96M43 638 aa13.62□□□□□ -0.23
CTC1-208ENST00000581671 ASAP1Q9ULH1 1129 aa13.62□□□□□ -0.23
CTC1-208ENST00000581671 TATP17735 454 aaPredicted RBP13.61□□□□□ -0.23
CTC1-208ENST00000581671 ECE1P42892 770 aa13.61□□□□□ -0.23
CTC1-208ENST00000581671 EAPPQ56P03 285 aaPredicted RBP13.61□□□□□ -0.23
CTC1-208ENST00000581671 CYP4F22Q6NT55 531 aa13.61□□□□□ -0.23
CTC1-208ENST00000581671 SBNO2Q9Y2G9 1366 aa13.6□□□□□ -0.23
CTC1-208ENST00000581671 HOXC9P31274 260 aa13.6□□□□□ -0.23
CTC1-208ENST00000581671 FKBP8Q14318 412 aa13.6□□□□□ -0.23
CTC1-208ENST00000581671 CNTROBQ8N137 903 aa13.6□□□□□ -0.23
CTC1-208ENST00000581671 TTLL6Q8N841 843 aa13.6□□□□□ -0.23
CTC1-208ENST00000581671 CLEC11AQ9Y240 323 aa13.6□□□□□ -0.23
CTC1-208ENST00000581671 DLEC1Q9Y238 1755 aa13.6□□□□□ -0.23
CTC1-208ENST00000581671 CA12O43570 354 aa13.59□□□□□ -0.23
CTC1-208ENST00000581671 ADAMTSL1Q8N6G6 1762 aa13.58□□□□□ -0.23
CTC1-208ENST00000581671 MYH14Q7Z406 1995 aaKnown RBP13.58□□□□□ -0.24
CTC1-208ENST00000581671 POLRMTO00411 1230 aaKnown RBP13.58□□□□□ -0.24
CTC1-208ENST00000581671 AOC2O75106 756 aa13.58□□□□□ -0.24
CTC1-208ENST00000581671 RPS6KA4O75676 772 aa13.58□□□□□ -0.24
CTC1-208ENST00000581671 RC3H1Q5TC82 1133 aaKnown RBP13.58□□□□□ -0.24
CTC1-208ENST00000581671 MAP1SQ66K74 1059 aaPredicted RBP13.58□□□□□ -0.24
CTC1-208ENST00000581671 L3MBTL3Q96JM7 780 aaPredicted RBP13.58□□□□□ -0.24
CTC1-208ENST00000581671 SRP68Q9UHB9 627 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms