RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 QSER1Q2KHR3 1735 aa11.89□□□□□ -0.51
CDK5RAP3-221ENST00000581662 ADGRF5Q8IZF2 1346 aa11.88□□□□□ -0.51
CDK5RAP3-221ENST00000581662 ZNF687Q8N1G0 1237 aa11.88□□□□□ -0.51
CDK5RAP3-221ENST00000581662 RBM46Q8TBY0 533 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-221ENST00000581662 PNPLA7Q6ZV29 1317 aa11.87□□□□□ -0.51
CDK5RAP3-221ENST00000581662 MMRN1Q13201 1228 aa11.87□□□□□ -0.51
CDK5RAP3-221ENST00000581662 TMEM132EQ6IEE7 984 aa11.87□□□□□ -0.51
CDK5RAP3-221ENST00000581662 PRR36Q9H6K5 1346 aa11.86□□□□□ -0.51
CDK5RAP3-221ENST00000581662 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-221ENST00000581662 LRRC4BQ9NT99 713 aa11.85□□□□□ -0.51
CDK5RAP3-221ENST00000581662 PIK3C2GO75747 1445 aa11.85□□□□□ -0.51
CDK5RAP3-221ENST00000581662 NHSQ6T4R5 1651 aa11.84□□□□□ -0.51
CDK5RAP3-221ENST00000581662 BRD4O60885 1362 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-221ENST00000581662 TBC1D12O60347 775 aa11.84□□□□□ -0.51
CDK5RAP3-221ENST00000581662 PDE4AP27815 886 aa11.84□□□□□ -0.51
CDK5RAP3-221ENST00000581662 LHX6Q9UPM6 363 aa11.84□□□□□ -0.51
CDK5RAP3-221ENST00000581662 WNK3Q9BYP7 1800 aa11.83□□□□□ -0.51
CDK5RAP3-221ENST00000581662 ANKRD30BQ9BXX2 1392 aa11.83□□□□□ -0.52
CDK5RAP3-221ENST00000581662 FSTL1Q12841 308 aa11.83□□□□□ -0.52
CDK5RAP3-221ENST00000581662 NMRK2Q9NPI5 230 aa11.83□□□□□ -0.52
CDK5RAP3-221ENST00000581662 USP19O94966 1318 aa11.83□□□□□ -0.52
CDK5RAP3-221ENST00000581662 AKAP12Q02952 1782 aa11.82□□□□□ -0.52
CDK5RAP3-221ENST00000581662 PTCD2Q8WV60 388 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-221ENST00000581662 CD2APQ9Y5K6 639 aa11.82□□□□□ -0.52
CDK5RAP3-221ENST00000581662 FAM50AQ14320 339 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-221ENST00000581662 CRISPLD2Q9H0B8 497 aa11.81□□□□□ -0.52
CDK5RAP3-221ENST00000581662 RTN4Q9NQC3 1192 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-221ENST00000581662 PPP1R15BQ5SWA1 713 aa11.8□□□□□ -0.52
CDK5RAP3-221ENST00000581662 PRAM1Q96QH2 718 aa11.8□□□□□ -0.52
CDK5RAP3-221ENST00000581662 TUBGCP6Q96RT7 1819 aa11.8□□□□□ -0.52
CDK5RAP3-221ENST00000581662 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-221ENST00000581662 NUTM2GQ5VZR2 741 aa11.79□□□□□ -0.52
CDK5RAP3-221ENST00000581662 LARP6Q9BRS8 491 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-221ENST00000581662 CDCA7Q9BWT1 371 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-221ENST00000581662 KIAA1210Q9ULL0 1709 aa11.79□□□□□ -0.52
CDK5RAP3-221ENST00000581662 SAFB2Q14151 953 aaKnown RBP eCLIP11.78□□□□□ -0.52
CDK5RAP3-221ENST00000581662 ANKRD13DQ6ZTN6 518 aa11.78□□□□□ -0.52
CDK5RAP3-221ENST00000581662 NGDNQ8NEJ9 315 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-221ENST00000581662 BBXQ8WY36 941 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-221ENST00000581662 C10orf71Q711Q0 1435 aa11.77□□□□□ -0.52
CDK5RAP3-221ENST00000581662 TRPM1Q7Z4N2 1603 aa11.76□□□□□ -0.53
CDK5RAP3-221ENST00000581662 RGS19P49795 217 aa11.76□□□□□ -0.53
CDK5RAP3-221ENST00000581662 USP6P35125 1406 aa11.76□□□□□ -0.53
CDK5RAP3-221ENST00000581662 BTAF1O14981 1849 aa11.75□□□□□ -0.53
CDK5RAP3-221ENST00000581662 MLLT1Q03111 559 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-221ENST00000581662 SLC27A3Q5K4L6 730 aa11.75□□□□□ -0.53
CDK5RAP3-221ENST00000581662 PRDM10Q9NQV6 1147 aa11.75□□□□□ -0.53
CDK5RAP3-221ENST00000581662 TFCP2L1Q9NZI6 479 aa11.75□□□□□ -0.53
CDK5RAP3-221ENST00000581662 IGSF1Q8N6C5 1336 aa11.75□□□□□ -0.53
CDK5RAP3-221ENST00000581662 SPATA31E1Q6ZUB1 1445 aa11.75□□□□□ -0.53
CDK5RAP3-221ENST00000581662 DDX27Q96GQ7 796 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-221ENST00000581662 ABCC6O95255 1503 aa11.74□□□□□ -0.53
CDK5RAP3-221ENST00000581662 POLR3AO14802 1390 aaPredicted RBP11.73□□□□□ -0.53
CDK5RAP3-221ENST00000581662 GCP02774 474 aa11.73□□□□□ -0.53
CDK5RAP3-221ENST00000581662 TOM1L2Q6ZVM7 507 aa11.73□□□□□ -0.53
CDK5RAP3-221ENST00000581662 WDR17Q8IZU2 1322 aa11.73□□□□□ -0.53
CDK5RAP3-221ENST00000581662 ACSBG1Q96GR2 724 aa11.73□□□□□ -0.53
CDK5RAP3-221ENST00000581662 PXDNLA1KZ92 1463 aa11.72□□□□□ -0.53
CDK5RAP3-221ENST00000581662 PBX2P40425 430 aa11.72□□□□□ -0.53
CDK5RAP3-221ENST00000581662 MSL1Q68DK7 614 aa11.72□□□□□ -0.53
CDK5RAP3-221ENST00000581662 C16orf71Q8IYS4 520 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-221ENST00000581662 OXER1Q8TDS5 423 aa11.72□□□□□ -0.53
CDK5RAP3-221ENST00000581662 ABHD8Q96I13 439 aa11.72□□□□□ -0.53
CDK5RAP3-221ENST00000581662 HIRIP3Q9BW71 556 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-221ENST00000581662 C14orf93Q9H972 538 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-221ENST00000581662 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-221ENST00000581662 AXIN2Q9Y2T1 843 aa11.72□□□□□ -0.53
CDK5RAP3-221ENST00000581662 WASLO00401 505 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-221ENST00000581662 FOXN1O15353 648 aa11.71□□□□□ -0.53
CDK5RAP3-221ENST00000581662 LSM11P83369 360 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDK5RAP3-221ENST00000581662 COL23A1Q86Y22 540 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-221ENST00000581662 COL18A1P39060 1754 aa11.7□□□□□ -0.54
CDK5RAP3-221ENST00000581662 EXOC5O00471 708 aa11.7□□□□□ -0.54
CDK5RAP3-221ENST00000581662 SMC1BQ8NDV3 1235 aa11.69□□□□□ -0.54
CDK5RAP3-221ENST00000581662 POGKQ9P215 609 aa11.69□□□□□ -0.54
CDK5RAP3-221ENST00000581662 PPP4R3BQ5MIZ7 849 aa11.68□□□□□ -0.54
CDK5RAP3-221ENST00000581662 ABTB2Q8N961 1025 aa11.68□□□□□ -0.54
CDK5RAP3-221ENST00000581662 SPRYD3Q8NCJ5 442 aa11.68□□□□□ -0.54
CDK5RAP3-221ENST00000581662 CARD10Q9BWT7 1032 aa11.68□□□□□ -0.54
CDK5RAP3-221ENST00000581662 SLIT3O75094 1523 aa11.68□□□□□ -0.54
CDK5RAP3-221ENST00000581662 ITSN1Q15811 1721 aa11.68□□□□□ -0.54
CDK5RAP3-221ENST00000581662 PPIP5K1Q6PFW1 1433 aa11.68□□□□□ -0.54
CDK5RAP3-221ENST00000581662 PLEKHG2Q9H7P9 1386 aa11.67□□□□□ -0.54
CDK5RAP3-221ENST00000581662 MINK1Q8N4C8 1332 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-221ENST00000581662 KCPQ6ZWJ8 1503 aa11.67□□□□□ -0.54
CDK5RAP3-221ENST00000581662 KCNQ4P56696 695 aa11.67□□□□□ -0.54
CDK5RAP3-221ENST00000581662 QRICH2Q9H0J4 1663 aa11.67□□□□□ -0.54
CDK5RAP3-221ENST00000581662 ADGRB1O14514 1584 aa11.67□□□□□ -0.54
CDK5RAP3-221ENST00000581662 PIK3C2AO00443 1686 aa11.66□□□□□ -0.54
CDK5RAP3-221ENST00000581662 ARHGAP33O14559 1287 aa11.66□□□□□ -0.54
CDK5RAP3-221ENST00000581662 CFAP70Q5T0N1 1121 aa11.66□□□□□ -0.54
CDK5RAP3-221ENST00000581662 RNF166Q96A37 237 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-221ENST00000581662 MAP3K9P80192 1104 aa11.65□□□□□ -0.54
CDK5RAP3-221ENST00000581662 MFSD10Q14728 455 aa11.65□□□□□ -0.54
CDK5RAP3-221ENST00000581662 CCDC7Q96M83 1385 aa11.65□□□□□ -0.55
CDK5RAP3-221ENST00000581662 ACEP12821 1306 aa11.64□□□□□ -0.55
CDK5RAP3-221ENST00000581662 PDE4DIPQ5VU43 2346 aa11.64□□□□□ -0.55
CDK5RAP3-221ENST00000581662 CPSF1Q10570 1443 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-221ENST00000581662 RGL3Q3MIN7 710 aa11.64□□□□□ -0.55
CDK5RAP3-221ENST00000581662 POTEEQ6S8J3 1075 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms