RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 PRIM1P49642 420 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-220ENST00000581160 BTBD11A6QL63 1104 aa11.91□□□□□ -0.5
CDK5RAP3-220ENST00000581160 DUSP27Q5VZP5 1158 aa11.91□□□□□ -0.5
CDK5RAP3-220ENST00000581160 FAM196AQ6ZSG2 479 aa11.91□□□□□ -0.5
CDK5RAP3-220ENST00000581160 MIS18AQ9NYP9 233 aa11.91□□□□□ -0.5
CDK5RAP3-220ENST00000581160 FAM182BQ5T319 152 aa11.9□□□□□ -0.5
CDK5RAP3-220ENST00000581160 PIGBQ92521 554 aa11.9□□□□□ -0.5
CDK5RAP3-220ENST00000581160 MBIPQ9NS73 344 aa11.9□□□□□ -0.5
CDK5RAP3-220ENST00000581160 TMOD3Q9NYL9 352 aa11.9□□□□□ -0.5
CDK5RAP3-220ENST00000581160 TSPYL4Q9UJ04 414 aa11.9□□□□□ -0.5
CDK5RAP3-220ENST00000581160 VIRMAQ69YN4 1812 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-220ENST00000581160 MRC1P22897 1456 aa11.89□□□□□ -0.51
CDK5RAP3-220ENST00000581160 RGS12O14924 1447 aa11.89□□□□□ -0.51
CDK5RAP3-220ENST00000581160 BRWD3Q6RI45 1802 aa11.89□□□□□ -0.51
CDK5RAP3-220ENST00000581160 TSR2Q969E8 191 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-220ENST00000581160 ACSBG1Q96GR2 724 aa11.89□□□□□ -0.51
CDK5RAP3-220ENST00000581160 FANCIQ9NVI1 1328 aa11.88□□□□□ -0.51
CDK5RAP3-220ENST00000581160 KCNQ2O43526 872 aa11.88□□□□□ -0.51
CDK5RAP3-220ENST00000581160 ZNF790Q6PG37 636 aa11.88□□□□□ -0.51
CDK5RAP3-220ENST00000581160 SYTL4Q96C24 671 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-220ENST00000581160 SIPA1L3O60292 1781 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-220ENST00000581160 KCNQ3O43525 872 aa11.87□□□□□ -0.51
CDK5RAP3-220ENST00000581160 EIF4A1P60842 406 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-220ENST00000581160 EXOSC9Q06265 439 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-220ENST00000581160 SLC39A6Q13433 755 aa11.87□□□□□ -0.51
CDK5RAP3-220ENST00000581160 ATG3Q9NT62 314 aa11.87□□□□□ -0.51
CDK5RAP3-220ENST00000581160 KAT6BQ8WYB5 2073 aa11.87□□□□□ -0.51
CDK5RAP3-220ENST00000581160 TOGARAM1Q9Y4F4 1720 aa11.86□□□□□ -0.51
CDK5RAP3-220ENST00000581160 ITGB4P16144 1822 aa11.86□□□□□ -0.51
CDK5RAP3-220ENST00000581160 TTC5Q8N0Z6 440 aa11.86□□□□□ -0.51
CDK5RAP3-220ENST00000581160 BCL11BQ9C0K0 894 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-220ENST00000581160 ASAP1Q9ULH1 1129 aa11.86□□□□□ -0.51
CDK5RAP3-220ENST00000581160 HEG1Q9ULI3 1381 aa11.85□□□□□ -0.51
CDK5RAP3-220ENST00000581160 CT47B1P0C2W7 299 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-220ENST00000581160 C8orf58Q8NAV2 365 aa11.85□□□□□ -0.51
CDK5RAP3-220ENST00000581160 SMARCC1Q92922 1105 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-220ENST00000581160 FMNL2Q96PY5 1086 aa11.85□□□□□ -0.51
CDK5RAP3-220ENST00000581160 SOS1Q07889 1333 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-220ENST00000581160 DOT1LQ8TEK3 1739 aa11.84□□□□□ -0.51
CDK5RAP3-220ENST00000581160 VAMP4O75379 141 aa11.84□□□□□ -0.51
CDK5RAP3-220ENST00000581160 CENPBP07199 599 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-220ENST00000581160 PTF1AQ7RTS3 328 aa11.84□□□□□ -0.51
CDK5RAP3-220ENST00000581160 ZNF496Q96IT1 587 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-220ENST00000581160 KDM3BQ7LBC6 1761 aa11.84□□□□□ -0.51
CDK5RAP3-220ENST00000581160 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-220ENST00000581160 TWISTNBQ3B726 338 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-220ENST00000581160 VSIG10Q8N0Z9 540 aa11.83□□□□□ -0.52
CDK5RAP3-220ENST00000581160 TSPYL6Q8N831 410 aa11.83□□□□□ -0.52
CDK5RAP3-220ENST00000581160 SBF2Q86WG5 1849 aa11.83□□□□□ -0.52
CDK5RAP3-220ENST00000581160 ELL2O00472 640 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-220ENST00000581160 TRIM37O94972 964 aa11.82□□□□□ -0.52
CDK5RAP3-220ENST00000581160 HOXB7P09629 217 aa11.82□□□□□ -0.52
CDK5RAP3-220ENST00000581160 SNRPA1P09661 255 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-220ENST00000581160 KRT24Q2M2I5 525 aa11.82□□□□□ -0.52
CDK5RAP3-220ENST00000581160 ZNF428Q96B54 188 aa11.82□□□□□ -0.52
CDK5RAP3-220ENST00000581160 CHMP4AQ9BY43 222 aa11.82□□□□□ -0.52
CDK5RAP3-220ENST00000581160 NHSQ6T4R5 1651 aa11.81□□□□□ -0.52
CDK5RAP3-220ENST00000581160 PTCD1O75127 700 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-220ENST00000581160 RBM42Q9BTD8 480 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-220ENST00000581160 TEX13AQ9BXU3 409 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-220ENST00000581160 PAPPAQ13219 1627 aa11.8□□□□□ -0.52
CDK5RAP3-220ENST00000581160 KCPQ6ZWJ8 1503 aa11.8□□□□□ -0.52
CDK5RAP3-220ENST00000581160 PALLDQ8WX93 1383 aa11.79□□□□□ -0.52
CDK5RAP3-220ENST00000581160 LOC102724428A0A0B4J2F2 783 aa11.79□□□□□ -0.52
CDK5RAP3-220ENST00000581160 PLSCR1O15162 318 aa11.79□□□□□ -0.52
CDK5RAP3-220ENST00000581160 RARSP54136 660 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-220ENST00000581160 SIK1P57059 783 aa11.79□□□□□ -0.52
CDK5RAP3-220ENST00000581160 ALDH1L2Q3SY69 923 aa11.79□□□□□ -0.52
CDK5RAP3-220ENST00000581160 SLC4A9Q96Q91 983 aa11.79□□□□□ -0.52
CDK5RAP3-220ENST00000581160 RCAN3Q9UKA8 241 aa11.79□□□□□ -0.52
CDK5RAP3-220ENST00000581160 USP16Q9Y5T5 823 aa11.79□□□□□ -0.52
CDK5RAP3-220ENST00000581160 UBR2Q8IWV8 1755 aa11.78□□□□□ -0.52
CDK5RAP3-220ENST00000581160 PRAMEF22A3QJZ6 481 aa11.78□□□□□ -0.52
CDK5RAP3-220ENST00000581160 APBA3O96018 575 aa11.78□□□□□ -0.52
CDK5RAP3-220ENST00000581160 EIF2S2P20042 333 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-220ENST00000581160 ATP6V1AP38606 617 aa11.78□□□□□ -0.52
CDK5RAP3-220ENST00000581160 CCDC30Q5VVM6 783 aa11.78□□□□□ -0.52
CDK5RAP3-220ENST00000581160 BTAF1O14981 1849 aa11.78□□□□□ -0.52
CDK5RAP3-220ENST00000581160 CCDC125Q86Z20 511 aa11.77□□□□□ -0.53
CDK5RAP3-220ENST00000581160 DNAJC10Q8IXB1 793 aa11.77□□□□□ -0.53
CDK5RAP3-220ENST00000581160 SSH1Q8WYL5 1049 aa11.77□□□□□ -0.53
CDK5RAP3-220ENST00000581160 STARD3NLO95772 234 aa11.76□□□□□ -0.53
CDK5RAP3-220ENST00000581160 CYP19A1P11511 503 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-220ENST00000581160 HMGB2P26583 209 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-220ENST00000581160 BRPF1P55201 1214 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-220ENST00000581160 HDGFL1Q5TGJ6 251 aa11.76□□□□□ -0.53
CDK5RAP3-220ENST00000581160 MRPL50Q8N5N7 158 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-220ENST00000581160 BCAR3O75815 825 aa11.75□□□□□ -0.53
CDK5RAP3-220ENST00000581160 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
CDK5RAP3-220ENST00000581160 ITPK1Q13572 414 aa11.75□□□□□ -0.53
CDK5RAP3-220ENST00000581160 SLC27A3Q5K4L6 730 aa11.75□□□□□ -0.53
CDK5RAP3-220ENST00000581160 NECTIN2Q92692 538 aa11.75□□□□□ -0.53
CDK5RAP3-220ENST00000581160 STK31Q9BXU1 1019 aa11.75□□□□□ -0.53
CDK5RAP3-220ENST00000581160 DDX21Q9NR30 783 aaKnown RBP eCLIP11.75□□□□□ -0.53
CDK5RAP3-220ENST00000581160 DBF4Q9UBU7 674 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-220ENST00000581160 CCNL1Q9UK58 526 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-220ENST00000581160 ERBB4Q15303 1308 aa11.75□□□□□ -0.53
CDK5RAP3-220ENST00000581160 ZNF831Q5JPB2 1677 aa11.75□□□□□ -0.53
CDK5RAP3-220ENST00000581160 TCERG1O14776 1098 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-220ENST00000581160 A1BGP04217 495 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms