RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PDE3BQ13370 1112 aa13.72□□□□□ -0.21
CCDC47-203ENST00000580986 CCDC27Q2M243 656 aa13.72□□□□□ -0.21
CCDC47-203ENST00000580986 C1orf141Q5JVX7 400 aa13.72□□□□□ -0.21
CCDC47-203ENST00000580986 ZNF530Q6P9A1 599 aaPredicted RBP13.72□□□□□ -0.21
CCDC47-203ENST00000580986 CEMIPQ8WUJ3 1361 aa13.71□□□□□ -0.21
CCDC47-203ENST00000580986 GNAT3A8MTJ3 354 aa13.71□□□□□ -0.21
CCDC47-203ENST00000580986 DCAF5Q96JK2 942 aa13.71□□□□□ -0.21
CCDC47-203ENST00000580986 TOGARAM1Q9Y4F4 1720 aa13.7□□□□□ -0.22
CCDC47-203ENST00000580986 A0A0G2JS52 829 aa13.7□□□□□ -0.22
CCDC47-203ENST00000580986 APAF1O14727 1248 aa13.7□□□□□ -0.22
CCDC47-203ENST00000580986 MYT1Q01538 1121 aa13.7□□□□□ -0.22
CCDC47-203ENST00000580986 KRT27Q7Z3Y8 459 aa13.7□□□□□ -0.22
CCDC47-203ENST00000580986 CCDC146Q8IYE0 955 aa13.7□□□□□ -0.22
CCDC47-203ENST00000580986 KDM6AO15550 1401 aaPredicted RBP13.7□□□□□ -0.22
CCDC47-203ENST00000580986 NHSQ6T4R5 1651 aa13.69□□□□□ -0.22
CCDC47-203ENST00000580986 SIPA1L3O60292 1781 aaPredicted RBP13.69□□□□□ -0.22
CCDC47-203ENST00000580986 MARCH10Q8NA82 808 aaPredicted RBP13.69□□□□□ -0.22
CCDC47-203ENST00000580986 DOT1LQ8TEK3 1739 aa13.69□□□□□ -0.22
CCDC47-203ENST00000580986 SBF2Q86WG5 1849 aa13.69□□□□□ -0.22
CCDC47-203ENST00000580986 EP400Q96L91 3159 aa13.68□□□□□ -0.22
CCDC47-203ENST00000580986 ERVV-2B6SEH9 535 aa13.67□□□□□ -0.22
CCDC47-203ENST00000580986 RIPK4P57078 832 aa13.67□□□□□ -0.22
CCDC47-203ENST00000580986 FAM196AQ6ZSG2 479 aa13.67□□□□□ -0.22
CCDC47-203ENST00000580986 DDX54Q8TDD1 881 aaKnown RBP13.67□□□□□ -0.22
CCDC47-203ENST00000580986 RTF1Q92541 710 aaKnown RBP13.67□□□□□ -0.22
CCDC47-203ENST00000580986 RNMTO43148 476 aaKnown RBP13.66□□□□□ -0.22
CCDC47-203ENST00000580986 CALD1Q05682 793 aaKnown RBP13.66□□□□□ -0.22
CCDC47-203ENST00000580986 TRIM35Q9UPQ4 493 aa13.66□□□□□ -0.22
CCDC47-203ENST00000580986 ITGB4P16144 1822 aa13.66□□□□□ -0.22
CCDC47-203ENST00000580986 ZNF521Q96K83 1311 aa13.65□□□□□ -0.22
CCDC47-203ENST00000580986 BABAM1Q9NWV8 329 aa13.65□□□□□ -0.22
CCDC47-203ENST00000580986 IL16Q14005 1332 aa13.64□□□□□ -0.23
CCDC47-203ENST00000580986 PAPPAQ13219 1627 aa13.64□□□□□ -0.23
CCDC47-203ENST00000580986 IL17REQ8NFR9 667 aa13.64□□□□□ -0.23
CCDC47-203ENST00000580986 RGPD3A6NKT7 1758 aaPredicted RBP13.63□□□□□ -0.23
CCDC47-203ENST00000580986 RGPD4Q7Z3J3 1758 aa13.63□□□□□ -0.23
CCDC47-203ENST00000580986 MPRIPQ6WCQ1 1025 aa13.63□□□□□ -0.23
CCDC47-203ENST00000580986 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
CCDC47-203ENST00000580986 WWC1Q8IX03 1113 aa13.63□□□□□ -0.23
CCDC47-203ENST00000580986 SLC52A2Q9HAB3 445 aa13.63□□□□□ -0.23
CCDC47-203ENST00000580986 RRP7AQ9Y3A4 280 aaKnown RBP13.62□□□□□ -0.23
CCDC47-203ENST00000580986 FARP1Q9Y4F1 1045 aaPredicted RBP13.62□□□□□ -0.23
CCDC47-203ENST00000580986 KDM3BQ7LBC6 1761 aa13.62□□□□□ -0.23
CCDC47-203ENST00000580986 ZNF831Q5JPB2 1677 aa13.62□□□□□ -0.23
CCDC47-203ENST00000580986 ZBED9Q6R2W3 1325 aa13.62□□□□□ -0.23
CCDC47-203ENST00000580986 TNS1Q9HBL0 1735 aaKnown RBP13.61□□□□□ -0.23
CCDC47-203ENST00000580986 CICQ96RK0 1608 aaPredicted RBP13.61□□□□□ -0.23
CCDC47-203ENST00000580986 UBR2Q8IWV8 1755 aa13.61□□□□□ -0.23
CCDC47-203ENST00000580986 TEFQ10587 303 aa13.61□□□□□ -0.23
CCDC47-203ENST00000580986 NEUROD2Q15784 382 aa13.61□□□□□ -0.23
CCDC47-203ENST00000580986 LGR6Q9HBX8 967 aa13.61□□□□□ -0.23
CCDC47-203ENST00000580986 BTAF1O14981 1849 aa13.61□□□□□ -0.23
CCDC47-203ENST00000580986 CD44P16070 742 aaKnown RBP13.6□□□□□ -0.23
CCDC47-203ENST00000580986 CABP4P57796 275 aa13.6□□□□□ -0.23
CCDC47-203ENST00000580986 HNRNPUQ00839 825 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCDC47-203ENST00000580986 MCM10Q7L590 875 aa13.6□□□□□ -0.23
CCDC47-203ENST00000580986 BCL11BQ9C0K0 894 aaPredicted RBP13.6□□□□□ -0.23
CCDC47-203ENST00000580986 TMOD3Q9NYL9 352 aa13.6□□□□□ -0.23
CCDC47-203ENST00000580986 ZNF853P0CG23 659 aa13.59□□□□□ -0.23
CCDC47-203ENST00000580986 TAF7Q15545 349 aaPredicted RBP13.59□□□□□ -0.23
CCDC47-203ENST00000580986 CFAP44Q96MT7 982 aa13.59□□□□□ -0.23
CCDC47-203ENST00000580986 IFT57Q9NWB7 429 aa13.59□□□□□ -0.23
CCDC47-203ENST00000580986 PRIM1P49642 420 aaKnown RBP13.58□□□□□ -0.24
CCDC47-203ENST00000580986 GNAI1P63096 354 aa13.58□□□□□ -0.24
CCDC47-203ENST00000580986 DCTN1Q14203 1278 aa13.58□□□□□ -0.24
CCDC47-203ENST00000580986 CCDC125Q86Z20 511 aa13.58□□□□□ -0.24
CCDC47-203ENST00000580986 NFATC2IPQ8NCF5 419 aa13.58□□□□□ -0.24
CCDC47-203ENST00000580986 LY75O60449 1722 aa13.58□□□□□ -0.24
CCDC47-203ENST00000580986 CHL1O00533 1208 aa13.57□□□□□ -0.24
CCDC47-203ENST00000580986 PIGBQ92521 554 aa13.57□□□□□ -0.24
CCDC47-203ENST00000580986 KCPQ6ZWJ8 1503 aa13.56□□□□□ -0.24
CCDC47-203ENST00000580986 GOLGA2Q08379 1002 aa13.56□□□□□ -0.24
CCDC47-203ENST00000580986 FAM182BQ5T319 152 aa13.56□□□□□ -0.24
CCDC47-203ENST00000580986 SMARCC1Q92922 1105 aaPredicted RBP13.56□□□□□ -0.24
CCDC47-203ENST00000580986 THUMPD2Q9BTF0 503 aaKnown RBP13.56□□□□□ -0.24
CCDC47-203ENST00000580986 BTBD11A6QL63 1104 aa13.55□□□□□ -0.24
CCDC47-203ENST00000580986 E9PSI1 815 aa13.55□□□□□ -0.24
CCDC47-203ENST00000580986 PLSCR1O15162 318 aa13.55□□□□□ -0.24
CCDC47-203ENST00000580986 KCNQ2O43526 872 aa13.55□□□□□ -0.24
CCDC47-203ENST00000580986 HMGB2P26583 209 aaKnown RBP13.55□□□□□ -0.24
CCDC47-203ENST00000580986 ZNF790Q6PG37 636 aa13.55□□□□□ -0.24
CCDC47-203ENST00000580986 ACSBG1Q96GR2 724 aa13.55□□□□□ -0.24
CCDC47-203ENST00000580986 SOS1Q07889 1333 aaPredicted RBP13.55□□□□□ -0.24
CCDC47-203ENST00000580986 HEG1Q9ULI3 1381 aa13.55□□□□□ -0.24
CCDC47-203ENST00000580986 KAT6BQ8WYB5 2073 aa13.54□□□□□ -0.24
CCDC47-203ENST00000580986 TRMT2AQ8IZ69 625 aaKnown RBP13.54□□□□□ -0.24
CCDC47-203ENST00000580986 SYTL4Q96C24 671 aaPredicted RBP13.54□□□□□ -0.24
CCDC47-203ENST00000580986 MYH16Q9H6N6 1097 aa13.54□□□□□ -0.24
CCDC47-203ENST00000580986 TRIM37O94972 964 aa13.53□□□□□ -0.24
CCDC47-203ENST00000580986 VSIG10Q8N0Z9 540 aa13.53□□□□□ -0.24
CCDC47-203ENST00000580986 ATG3Q9NT62 314 aa13.53□□□□□ -0.24
CCDC47-203ENST00000580986 TSPYL4Q9UJ04 414 aa13.53□□□□□ -0.24
CCDC47-203ENST00000580986 PALLDQ8WX93 1383 aa13.53□□□□□ -0.24
CCDC47-203ENST00000580986 HOXB7P09629 217 aa13.52□□□□□ -0.25
CCDC47-203ENST00000580986 SLFN5Q08AF3 891 aa13.52□□□□□ -0.25
CCDC47-203ENST00000580986 LHX8Q68G74 356 aa13.52□□□□□ -0.25
CCDC47-203ENST00000580986 TTC5Q8N0Z6 440 aa13.52□□□□□ -0.25
CCDC47-203ENST00000580986 SALL2Q9Y467 1007 aaPredicted RBP13.52□□□□□ -0.25
CCDC47-203ENST00000580986 LAMB4A4D0S4 1761 aa13.52□□□□□ -0.25
CCDC47-203ENST00000580986 C5P01031 1676 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms