RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 INTS3Q68E01 1043 aaKnown RBP7.97□□□□□ -1.13
PPP4R1-217ENST00000580583 SMC5Q8IY18 1101 aa7.97□□□□□ -1.13
PPP4R1-217ENST00000580583 MIS18AQ9NYP9 233 aa7.97□□□□□ -1.13
PPP4R1-217ENST00000580583 PDZRN3Q9UPQ7 1066 aa7.97□□□□□ -1.13
PPP4R1-217ENST00000580583 ZBTB7BO15156 539 aaPredicted RBP7.96□□□□□ -1.14
PPP4R1-217ENST00000580583 HOXB7P09629 217 aa7.96□□□□□ -1.14
PPP4R1-217ENST00000580583 ZC3H6P61129 1189 aaKnown RBP7.96□□□□□ -1.14
PPP4R1-217ENST00000580583 TEFQ10587 303 aa7.96□□□□□ -1.14
PPP4R1-217ENST00000580583 CCDC30Q5VVM6 783 aa7.96□□□□□ -1.14
PPP4R1-217ENST00000580583 AXIN2Q9Y2T1 843 aa7.96□□□□□ -1.14
PPP4R1-217ENST00000580583 SOS2Q07890 1332 aaPredicted RBP7.96□□□□□ -1.14
PPP4R1-217ENST00000580583 COL5A2P05997 1499 aaPredicted RBP7.95□□□□□ -1.14
PPP4R1-217ENST00000580583 SCN11AQ9UI33 1791 aa7.95□□□□□ -1.14
PPP4R1-217ENST00000580583 SLC4A2P04920 1241 aa7.95□□□□□ -1.14
PPP4R1-217ENST00000580583 CCT4P50991 539 aaKnown RBP7.95□□□□□ -1.14
PPP4R1-217ENST00000580583 ERICH6Q7L0X2 663 aa7.95□□□□□ -1.14
PPP4R1-217ENST00000580583 NPM2Q86SE8 214 aaKnown RBP7.95□□□□□ -1.14
PPP4R1-217ENST00000580583 RAPGEF4Q8WZA2 1011 aa7.95□□□□□ -1.14
PPP4R1-217ENST00000580583 C1orf115Q9H7X2 142 aa7.95□□□□□ -1.14
PPP4R1-217ENST00000580583 NLRP2Q9NX02 1062 aa7.95□□□□□ -1.14
PPP4R1-217ENST00000580583 AHDC1Q5TGY3 1603 aaPredicted RBP7.95□□□□□ -1.14
PPP4R1-217ENST00000580583 KDM6AO15550 1401 aaPredicted RBP7.95□□□□□ -1.14
PPP4R1-217ENST00000580583 CACNA1FO60840 1977 aa7.94□□□□□ -1.14
PPP4R1-217ENST00000580583 COL22A1Q8NFW1 1626 aaPredicted RBP7.94□□□□□ -1.14
PPP4R1-217ENST00000580583 RNMTO43148 476 aaKnown RBP7.94□□□□□ -1.14
PPP4R1-217ENST00000580583 CSB-PGBD3P0DP91 1061 aa7.94□□□□□ -1.14
PPP4R1-217ENST00000580583 TATP17735 454 aaPredicted RBP7.94□□□□□ -1.14
PPP4R1-217ENST00000580583 FLIIQ13045 1269 aa7.94□□□□□ -1.14
PPP4R1-217ENST00000580583 HDGFL1Q5TGJ6 251 aa7.94□□□□□ -1.14
PPP4R1-217ENST00000580583 CABLES1Q8TDN4 633 aa7.94□□□□□ -1.14
PPP4R1-217ENST00000580583 GCC1Q96CN9 775 aa7.94□□□□□ -1.14
PPP4R1-217ENST00000580583 IPO9Q96P70 1041 aaKnown RBP7.94□□□□□ -1.14
PPP4R1-217ENST00000580583 CHMP4AQ9BY43 222 aa7.94□□□□□ -1.14
PPP4R1-217ENST00000580583 PRDM11Q9NQV5 511 aa7.94□□□□□ -1.14
PPP4R1-217ENST00000580583 SLAIN2Q9P270 581 aa7.94□□□□□ -1.14
PPP4R1-217ENST00000580583 C5P01031 1676 aa7.93□□□□□ -1.14
PPP4R1-217ENST00000580583 ROBO1Q9Y6N7 1651 aa7.93□□□□□ -1.14
PPP4R1-217ENST00000580583 LAMB4A4D0S4 1761 aa7.93□□□□□ -1.14
PPP4R1-217ENST00000580583 NUCB1Q02818 461 aa7.93□□□□□ -1.14
PPP4R1-217ENST00000580583 MPRIPQ6WCQ1 1025 aa7.93□□□□□ -1.14
PPP4R1-217ENST00000580583 G2E3Q7L622 706 aa7.93□□□□□ -1.14
PPP4R1-217ENST00000580583 PLSCR2Q9NRY7 297 aa7.93□□□□□ -1.14
PPP4R1-217ENST00000580583 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.93□□□□□ -1.141e-7■■□□□ 12
PPP4R1-217ENST00000580583 SPG7Q9UQ90 795 aa7.93□□□□□ -1.14
PPP4R1-217ENST00000580583 NOP58Q9Y2X3 529 aaKnown RBP7.93□□□□□ -1.14
PPP4R1-217ENST00000580583 GLI3P10071 1580 aa7.93□□□□□ -1.14
PPP4R1-217ENST00000580583 PLCH1Q4KWH8 1693 aa7.92□□□□□ -1.14
PPP4R1-217ENST00000580583 BTBD11A6QL63 1104 aa7.92□□□□□ -1.14
PPP4R1-217ENST00000580583 EIF4A1P60842 406 aaKnown RBP7.92□□□□□ -1.14
PPP4R1-217ENST00000580583 FKBP5Q13451 457 aaPredicted RBP7.92□□□□□ -1.14
PPP4R1-217ENST00000580583 CHRNA2Q15822 529 aa7.92□□□□□ -1.14
PPP4R1-217ENST00000580583 DDRGK1Q96HY6 314 aa7.92□□□□□ -1.14
PPP4R1-217ENST00000580583 LGR6Q9HBX8 967 aa7.92□□□□□ -1.14
PPP4R1-217ENST00000580583 WDR17Q8IZU2 1322 aa7.92□□□□□ -1.14
PPP4R1-217ENST00000580583 PAPPAQ13219 1627 aa7.92□□□□□ -1.14
PPP4R1-217ENST00000580583 COL14A1Q05707 1796 aaKnown RBP7.92□□□□□ -1.14
PPP4R1-217ENST00000580583 PHKG2P15735 406 aa7.91□□□□□ -1.14
PPP4R1-217ENST00000580583 CHD1LQ86WJ1 897 aa7.91□□□□□ -1.14
PPP4R1-217ENST00000580583 ANKRD44Q8N8A2 993 aa7.91□□□□□ -1.14
PPP4R1-217ENST00000580583 MEIS3Q99687 375 aa7.91□□□□□ -1.14
PPP4R1-217ENST00000580583 HEG1Q9ULI3 1381 aa7.91□□□□□ -1.14
PPP4R1-217ENST00000580583 LTBP4Q8N2S1 1624 aa7.91□□□□□ -1.14
PPP4R1-217ENST00000580583 SHANK3Q9BYB0 1731 aa7.91□□□□□ -1.14
PPP4R1-217ENST00000580583 COL16A1Q07092 1604 aaPredicted RBP7.9□□□□□ -1.14
PPP4R1-217ENST00000580583 PCDH11XQ9BZA7 1347 aa7.9□□□□□ -1.14
PPP4R1-217ENST00000580583 PCDH11YQ9BZA8 1340 aa7.9□□□□□ -1.14
PPP4R1-217ENST00000580583 F6X3S4 739 aa7.9□□□□□ -1.14
PPP4R1-217ENST00000580583 HMMRO75330 724 aa7.9□□□□□ -1.14
PPP4R1-217ENST00000580583 CEP85Q6P2H3 762 aa7.9□□□□□ -1.14
PPP4R1-217ENST00000580583 SLC4A10Q6U841 1118 aa7.9□□□□□ -1.14
PPP4R1-217ENST00000580583 SIRT2Q8IXJ6 389 aa7.9□□□□□ -1.14
PPP4R1-217ENST00000580583 RPAP2Q8IXW5 612 aaPredicted RBP7.9□□□□□ -1.14
PPP4R1-217ENST00000580583 IFNL2Q8IZJ0 200 aa7.9□□□□□ -1.14
PPP4R1-217ENST00000580583 NECTIN2Q92692 538 aa7.9□□□□□ -1.14
PPP4R1-217ENST00000580583 LNPKQ9C0E8 428 aa7.9□□□□□ -1.14
PPP4R1-217ENST00000580583 WNK3Q9BYP7 1800 aa7.89□□□□□ -1.15
PPP4R1-217ENST00000580583 UBR2Q8IWV8 1755 aa7.89□□□□□ -1.15
PPP4R1-217ENST00000580583 KCNQ3O43525 872 aa7.89□□□□□ -1.15
PPP4R1-217ENST00000580583 HSP90AB1P08238 724 aaKnown RBP7.89□□□□□ -1.15
PPP4R1-217ENST00000580583 GNAI3P08754 354 aa7.89□□□□□ -1.15
PPP4R1-217ENST00000580583 SLC52A2Q9HAB3 445 aa7.89□□□□□ -1.15
PPP4R1-217ENST00000580583 UPF2Q9HAU5 1272 aaKnown RBP7.89□□□□□ -1.15
PPP4R1-217ENST00000580583 CHPF2Q9P2E5 772 aa7.89□□□□□ -1.15
PPP4R1-217ENST00000580583 ADCY9O60503 1353 aa7.88□□□□□ -1.15
PPP4R1-217ENST00000580583 NPM3O75607 178 aaKnown RBP7.88□□□□□ -1.15
PPP4R1-217ENST00000580583 GNAI2P04899 355 aa7.88□□□□□ -1.15
PPP4R1-217ENST00000580583 EIF2S2P20042 333 aaKnown RBP7.88□□□□□ -1.15
PPP4R1-217ENST00000580583 BMP2KLQ5H9B9 411 aa7.88□□□□□ -1.15
PPP4R1-217ENST00000580583 ANKRD45Q5TZF3 282 aa7.88□□□□□ -1.15
PPP4R1-217ENST00000580583 TOM1L2Q6ZVM7 507 aa7.88□□□□□ -1.15
PPP4R1-217ENST00000580583 DCAF5Q96JK2 942 aa7.88□□□□□ -1.15
PPP4R1-217ENST00000580583 ANP32EQ9BTT0 268 aa7.88□□□□□ -1.15
PPP4R1-217ENST00000580583 DCTPP1Q9H773 170 aa7.88□□□□□ -1.15
PPP4R1-217ENST00000580583 DBF4Q9UBU7 674 aaPredicted RBP7.88□□□□□ -1.15
PPP4R1-217ENST00000580583 ZBTB47Q9UFB7 747 aaPredicted RBP7.88□□□□□ -1.15
PPP4R1-217ENST00000580583 TOGARAM1Q9Y4F4 1720 aa7.88□□□□□ -1.15
PPP4R1-217ENST00000580583 CYP27B1O15528 508 aa7.87□□□□□ -1.15
PPP4R1-217ENST00000580583 GIGYF1O75420 1035 aaPredicted RBP7.87□□□□□ -1.15
PPP4R1-217ENST00000580583 DSG3P32926 999 aa7.87□□□□□ -1.15
PPP4R1-217ENST00000580583 CARD10Q9BWT7 1032 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms