RNA–Protein interactions for RNA: ENST00000578993.5

LIMD2-206, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-206ENST00000578993 MSH5O43196 834 aa27.57■■■□□ 2
LIMD2-206ENST00000578993 HSP90AB1P08238 724 aaKnown RBP27.57■■■□□ 2
LIMD2-206ENST00000578993 COL5A3P25940 1745 aaPredicted RBP27.56■■■□□ 2
LIMD2-206ENST00000578993 CNGB1Q14028 1251 aaPredicted RBP27.56■■■□□ 2
LIMD2-206ENST00000578993 POLD1P28340 1107 aa27.55■■■□□ 2
LIMD2-206ENST00000578993 SLC4A9Q96Q91 983 aa27.55■■■□□ 2
LIMD2-206ENST00000578993 MSL1Q68DK7 614 aa27.54■■■□□ 2
LIMD2-206ENST00000578993 HMOX1P09601 288 aa27.53■■■□□ 2
LIMD2-206ENST00000578993 ATP6V1AP38606 617 aa27.53■■■□□ 2
LIMD2-206ENST00000578993 AK7Q96M32 723 aa27.53■■■□□ 2
LIMD2-206ENST00000578993 DIAPH1O60610 1272 aaKnown RBP27.52■■■□□ 2
LIMD2-206ENST00000578993 HMGB2P26583 209 aaKnown RBP27.52■■■□□ 2
LIMD2-206ENST00000578993 GOLGB1Q14789 3259 aaKnown RBP27.52■■■□□ 2
LIMD2-206ENST00000578993 C1orf141Q5JVX7 400 aa27.51■■□□□ 1.99
LIMD2-206ENST00000578993 FLAD1Q8NFF5 587 aa27.51■■□□□ 1.99
LIMD2-206ENST00000578993 MYH14Q7Z406 1995 aaKnown RBP27.51■■□□□ 1.99
LIMD2-206ENST00000578993 CABP4P57796 275 aa27.5■■□□□ 1.99
LIMD2-206ENST00000578993 ADAMTS7Q9UKP4 1686 aa27.49■■□□□ 1.99
LIMD2-206ENST00000578993 DCAF8L1A6NGE4 600 aa27.49■■□□□ 1.99
LIMD2-206ENST00000578993 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.48■■□□□ 1.99
LIMD2-206ENST00000578993 PHF14O94880 888 aa27.48■■□□□ 1.99
LIMD2-206ENST00000578993 NFATC2IPQ8NCF5 419 aa27.48■■□□□ 1.99
LIMD2-206ENST00000578993 TJP1Q07157 1748 aa27.47■■□□□ 1.99
LIMD2-206ENST00000578993 KLHL34Q8N239 644 aa27.47■■□□□ 1.99
LIMD2-206ENST00000578993 NLGN2Q8NFZ4 835 aa27.47■■□□□ 1.99
LIMD2-206ENST00000578993 CHD4Q14839 1912 aa27.47■■□□□ 1.99
LIMD2-206ENST00000578993 YY1P25490 414 aa27.46■■□□□ 1.99
LIMD2-206ENST00000578993 SSFA2P28290 1259 aa27.46■■□□□ 1.99
LIMD2-206ENST00000578993 AKAP4Q5JQC9 854 aa27.46■■□□□ 1.99
LIMD2-206ENST00000578993 RBM42Q9BTD8 480 aaKnown RBP27.46■■□□□ 1.99
LIMD2-206ENST00000578993 CICQ96RK0 1608 aaPredicted RBP27.45■■□□□ 1.99
LIMD2-206ENST00000578993 GNPATO15228 680 aa27.45■■□□□ 1.98
LIMD2-206ENST00000578993 LGR6Q9HBX8 967 aa27.45■■□□□ 1.98
LIMD2-206ENST00000578993 MRC1P22897 1456 aa27.44■■□□□ 1.98
LIMD2-206ENST00000578993 MTHFSDQ2M296 383 aaKnown RBP27.44■■□□□ 1.98
LIMD2-206ENST00000578993 C4AP0C0L4 1744 aa27.41■■□□□ 1.98
LIMD2-206ENST00000578993 RNMTO43148 476 aaKnown RBP27.4■■□□□ 1.98
LIMD2-206ENST00000578993 PTCD1O75127 700 aaKnown RBP27.4■■□□□ 1.98
LIMD2-206ENST00000578993 SLC52A2Q9HAB3 445 aa27.39■■□□□ 1.98
LIMD2-206ENST00000578993 CNTNAP4Q9C0A0 1308 aa27.39■■□□□ 1.97
LIMD2-206ENST00000578993 U2SURPO15042 1029 aaKnown RBP27.38■■□□□ 1.97
LIMD2-206ENST00000578993 RC3H1Q5TC82 1133 aaKnown RBP27.38■■□□□ 1.97
LIMD2-206ENST00000578993 SIPA1L3O60292 1781 aaPredicted RBP27.36■■□□□ 1.97
LIMD2-206ENST00000578993 UBR2Q8IWV8 1755 aa27.36■■□□□ 1.97
LIMD2-206ENST00000578993 PPP2R1AP30153 589 aa27.36■■□□□ 1.97
LIMD2-206ENST00000578993 RTCBQ9Y3I0 505 aaKnown RBP27.35■■□□□ 1.97
LIMD2-206ENST00000578993 KCPQ6ZWJ8 1503 aa27.35■■□□□ 1.97
LIMD2-206ENST00000578993 GPR162Q16538 588 aa27.34■■□□□ 1.97
LIMD2-206ENST00000578993 RPS6KA4O75676 772 aa27.33■■□□□ 1.97
LIMD2-206ENST00000578993 SLC39A6Q13433 755 aa27.33■■□□□ 1.97
LIMD2-206ENST00000578993 TRAPPC3LQ5T215 181 aa27.33■■□□□ 1.97
LIMD2-206ENST00000578993 ARHGEF1Q92888 912 aaKnown RBP27.33■■□□□ 1.97
LIMD2-206ENST00000578993 CD2APQ9Y5K6 639 aa27.33■■□□□ 1.97
LIMD2-206ENST00000578993 YBX3P16989 372 aaKnown RBP eCLIP27.31■■□□□ 1.96
LIMD2-206ENST00000578993 CRKLP46109 303 aaKnown RBP27.31■■□□□ 1.96
LIMD2-206ENST00000578993 KIF13BQ9NQT8 1826 aa27.31■■□□□ 1.96
LIMD2-206ENST00000578993 PHACTR3Q96KR7 559 aa27.3■■□□□ 1.96
LIMD2-206ENST00000578993 RSPH6AQ9H0K4 717 aa27.3■■□□□ 1.96
LIMD2-206ENST00000578993 ADRA2BP18089 450 aa27.29■■□□□ 1.96
LIMD2-206ENST00000578993 PELP1Q8IZL8 1130 aaKnown RBP27.29■■□□□ 1.96
LIMD2-206ENST00000578993 CFAP53Q96M91 514 aa27.29■■□□□ 1.96
LIMD2-206ENST00000578993 KIAA1551Q9HCM1 1747 aa27.29■■□□□ 1.96
LIMD2-206ENST00000578993 DNAJC10Q8IXB1 793 aa27.28■■□□□ 1.96
LIMD2-206ENST00000578993 IL17REQ8NFR9 667 aa27.28■■□□□ 1.96
LIMD2-206ENST00000578993 MMP10P09238 476 aa27.27■■□□□ 1.96
LIMD2-206ENST00000578993 INTS5Q6P9B9 1019 aaKnown RBP27.27■■□□□ 1.96
LIMD2-206ENST00000578993 GYS1P13807 737 aa27.26■■□□□ 1.95
LIMD2-206ENST00000578993 PRKAR2BP31323 418 aa27.26■■□□□ 1.95
LIMD2-206ENST00000578993 GNAT3A8MTJ3 354 aa27.25■■□□□ 1.95
LIMD2-206ENST00000578993 GAS2L2Q8NHY3 880 aa27.25■■□□□ 1.95
LIMD2-206ENST00000578993 RFC4P35249 363 aa27.24■■□□□ 1.95
LIMD2-206ENST00000578993 N4BP2Q86UW6 1770 aaPredicted RBP27.24■■□□□ 1.95
LIMD2-206ENST00000578993 CYP19A1P11511 503 aaPredicted RBP27.23■■□□□ 1.95
LIMD2-206ENST00000578993 NLGN1Q8N2Q7 840 aa27.23■■□□□ 1.95
LIMD2-206ENST00000578993 ZNF784Q8NCA9 323 aaPredicted RBP27.22■■□□□ 1.95
LIMD2-206ENST00000578993 SRP68Q9UHB9 627 aaKnown RBP27.22■■□□□ 1.95
LIMD2-206ENST00000578993 CEMIPQ8WUJ3 1361 aa27.22■■□□□ 1.95
LIMD2-206ENST00000578993 U2AF1L5P0DN76 240 aaPredicted RBP27.21■■□□□ 1.95
LIMD2-206ENST00000578993 U2AF1Q01081 240 aaKnown RBP eCLIP27.21■■□□□ 1.95
LIMD2-206ENST00000578993 CCDC87Q9NVE4 849 aa27.21■■□□□ 1.95
LIMD2-206ENST00000578993 NUDCQ9Y266 331 aa27.21■■□□□ 1.95
LIMD2-206ENST00000578993 SOS1Q07889 1333 aaPredicted RBP27.19■■□□□ 1.94
LIMD2-206ENST00000578993 USP42Q9H9J4 1324 aaKnown RBP27.19■■□□□ 1.94
LIMD2-206ENST00000578993 DLG5Q8TDM6 1919 aa27.18■■□□□ 1.94
LIMD2-206ENST00000578993 VSIG10Q8N0Z9 540 aa27.18■■□□□ 1.94
LIMD2-206ENST00000578993 C10orf71Q711Q0 1435 aa27.17■■□□□ 1.94
LIMD2-206ENST00000578993 FCHSD2O94868 740 aa27.17■■□□□ 1.94
LIMD2-206ENST00000578993 TEFQ10587 303 aa27.17■■□□□ 1.94
LIMD2-206ENST00000578993 FKBP8Q14318 412 aa27.17■■□□□ 1.94
LIMD2-206ENST00000578993 ZNF496Q96IT1 587 aaPredicted RBP27.17■■□□□ 1.94
LIMD2-206ENST00000578993 ZBTB1Q9Y2K1 713 aa27.17■■□□□ 1.94
LIMD2-206ENST00000578993 PXDNLA1KZ92 1463 aa27.17■■□□□ 1.94
LIMD2-206ENST00000578993 BRCA1P38398 1863 aaKnown RBP27.17■■□□□ 1.94
LIMD2-206ENST00000578993 GRIN3BO60391 1043 aa27.16■■□□□ 1.94
LIMD2-206ENST00000578993 ZNF790Q6PG37 636 aa27.16■■□□□ 1.94
LIMD2-206ENST00000578993 WWC3Q9ULE0 1092 aa27.16■■□□□ 1.94
LIMD2-206ENST00000578993 KCNQ3O43525 872 aa27.13■■□□□ 1.93
LIMD2-206ENST00000578993 DDR1Q08345 913 aa27.13■■□□□ 1.93
LIMD2-206ENST00000578993 TTC5Q8N0Z6 440 aa27.13■■□□□ 1.93
LIMD2-206ENST00000578993 AFDNP55196 1824 aaKnown RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms