RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 AK7Q96M32 723 aa19.7■□□□□ 0.74
CCDC57-212ENST00000578910 NFATC2IPQ8NCF5 419 aa19.69■□□□□ 0.74
CCDC57-212ENST00000578910 SLC4A9Q96Q91 983 aa19.69■□□□□ 0.74
CCDC57-212ENST00000578910 MSL1Q68DK7 614 aa19.68■□□□□ 0.74
CCDC57-212ENST00000578910 RBM42Q9BTD8 480 aaKnown RBP19.68■□□□□ 0.74
CCDC57-212ENST00000578910 KDM6AO15550 1401 aaPredicted RBP19.68■□□□□ 0.74
CCDC57-212ENST00000578910 TAF1LQ8IZX4 1826 aa19.67■□□□□ 0.74
CCDC57-212ENST00000578910 KLHL34Q8N239 644 aa19.67■□□□□ 0.74
CCDC57-212ENST00000578910 LGR6Q9HBX8 967 aa19.67■□□□□ 0.74
CCDC57-212ENST00000578910 C5P01031 1676 aa19.67■□□□□ 0.74
CCDC57-212ENST00000578910 PHF14O94880 888 aa19.66■□□□□ 0.74
CCDC57-212ENST00000578910 AKAP4Q5JQC9 854 aa19.66■□□□□ 0.74
CCDC57-212ENST00000578910 MTHFSDQ2M296 383 aaKnown RBP19.65■□□□□ 0.74
CCDC57-212ENST00000578910 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.64■□□□□ 0.73
CCDC57-212ENST00000578910 U2SURPO15042 1029 aaKnown RBP19.64■□□□□ 0.73
CCDC57-212ENST00000578910 C4BP0C0L5 1744 aa19.64■□□□□ 0.73
CCDC57-212ENST00000578910 MAP3K5Q99683 1374 aa19.63■□□□□ 0.73
CCDC57-212ENST00000578910 PTCD1O75127 700 aaKnown RBP19.63■□□□□ 0.73
CCDC57-212ENST00000578910 YY1P25490 414 aa19.63■□□□□ 0.73
CCDC57-212ENST00000578910 COL24A1Q17RW2 1714 aa19.62■□□□□ 0.73
CCDC57-212ENST00000578910 GNPATO15228 680 aa19.62■□□□□ 0.73
CCDC57-212ENST00000578910 RNMTO43148 476 aaKnown RBP19.62■□□□□ 0.73
CCDC57-212ENST00000578910 SSFA2P28290 1259 aa19.62■□□□□ 0.73
CCDC57-212ENST00000578910 NLGN2Q8NFZ4 835 aa19.61■□□□□ 0.73
CCDC57-212ENST00000578910 PPP2R1AP30153 589 aa19.6■□□□□ 0.73
CCDC57-212ENST00000578910 RC3H1Q5TC82 1133 aaKnown RBP19.6■□□□□ 0.73
CCDC57-212ENST00000578910 SLC52A2Q9HAB3 445 aa19.6■□□□□ 0.73
CCDC57-212ENST00000578910 GPR162Q16538 588 aa19.58■□□□□ 0.72
CCDC57-212ENST00000578910 TRAPPC3LQ5T215 181 aa19.58■□□□□ 0.72
CCDC57-212ENST00000578910 CFAP53Q96M91 514 aa19.58■□□□□ 0.72
CCDC57-212ENST00000578910 RTCBQ9Y3I0 505 aaKnown RBP19.58■□□□□ 0.72
CCDC57-212ENST00000578910 COL3A1P02461 1466 aaPredicted RBP19.58■□□□□ 0.72
CCDC57-212ENST00000578910 UBR3Q6ZT12 1888 aa19.58■□□□□ 0.72
CCDC57-212ENST00000578910 RPS6KA4O75676 772 aa19.57■□□□□ 0.72
CCDC57-212ENST00000578910 ARHGEF1Q92888 912 aaKnown RBP19.57■□□□□ 0.72
CCDC57-212ENST00000578910 SLC39A6Q13433 755 aa19.56■□□□□ 0.72
CCDC57-212ENST00000578910 SCN11AQ9UI33 1791 aa19.55■□□□□ 0.72
CCDC57-212ENST00000578910 PELP1Q8IZL8 1130 aaKnown RBP19.55■□□□□ 0.72
CCDC57-212ENST00000578910 PHACTR3Q96KR7 559 aa19.55■□□□□ 0.72
CCDC57-212ENST00000578910 NUDCQ9Y266 331 aa19.55■□□□□ 0.72
CCDC57-212ENST00000578910 CNTNAP4Q9C0A0 1308 aa19.54■□□□□ 0.72
CCDC57-212ENST00000578910 CRKLP46109 303 aaKnown RBP19.54■□□□□ 0.72
CCDC57-212ENST00000578910 IL17REQ8NFR9 667 aa19.54■□□□□ 0.72
CCDC57-212ENST00000578910 CD2APQ9Y5K6 639 aa19.54■□□□□ 0.72
CCDC57-212ENST00000578910 RSPH6AQ9H0K4 717 aa19.53■□□□□ 0.72
CCDC57-212ENST00000578910 GNAT3A8MTJ3 354 aa19.52■□□□□ 0.72
CCDC57-212ENST00000578910 PRKAR2BP31323 418 aa19.52■□□□□ 0.72
CCDC57-212ENST00000578910 GAS2L2Q8NHY3 880 aa19.52■□□□□ 0.72
CCDC57-212ENST00000578910 ZNF831Q5JPB2 1677 aa19.52■□□□□ 0.71
CCDC57-212ENST00000578910 U2AF1L5P0DN76 240 aaPredicted RBP19.51■□□□□ 0.71
CCDC57-212ENST00000578910 ADRA2BP18089 450 aa19.51■□□□□ 0.71
CCDC57-212ENST00000578910 RFC4P35249 363 aa19.51■□□□□ 0.71
CCDC57-212ENST00000578910 U2AF1Q01081 240 aaKnown RBP eCLIP19.51■□□□□ 0.71
CCDC57-212ENST00000578910 INTS5Q6P9B9 1019 aaKnown RBP19.51■□□□□ 0.71
CCDC57-212ENST00000578910 DNAJC10Q8IXB1 793 aa19.51■□□□□ 0.71
CCDC57-212ENST00000578910 NLGN1Q8N2Q7 840 aa19.51■□□□□ 0.71
CCDC57-212ENST00000578910 MYH14Q7Z406 1995 aaKnown RBP19.5■□□□□ 0.71
CCDC57-212ENST00000578910 FCHSD2O94868 740 aa19.49■□□□□ 0.71
CCDC57-212ENST00000578910 MMP10P09238 476 aa19.49■□□□□ 0.71
CCDC57-212ENST00000578910 GYS1P13807 737 aa19.49■□□□□ 0.71
CCDC57-212ENST00000578910 CYP19A1P11511 503 aaPredicted RBP19.48■□□□□ 0.71
CCDC57-212ENST00000578910 YBX3P16989 372 aaKnown RBP eCLIP19.48■□□□□ 0.71
CCDC57-212ENST00000578910 TEFQ10587 303 aa19.47■□□□□ 0.71
CCDC57-212ENST00000578910 COL5A3P25940 1745 aaPredicted RBP19.47■□□□□ 0.71
CCDC57-212ENST00000578910 UTRNP46939 3433 aa19.46■□□□□ 0.71
CCDC57-212ENST00000578910 VSIG10Q8N0Z9 540 aa19.46■□□□□ 0.71
CCDC57-212ENST00000578910 CCDC87Q9NVE4 849 aa19.46■□□□□ 0.71
CCDC57-212ENST00000578910 SRP68Q9UHB9 627 aaKnown RBP19.46■□□□□ 0.71
CCDC57-212ENST00000578910 TTC5Q8N0Z6 440 aa19.45■□□□□ 0.7
CCDC57-212ENST00000578910 VIRMAQ69YN4 1812 aaKnown RBP19.45■□□□□ 0.7
CCDC57-212ENST00000578910 MRC1P22897 1456 aa19.45■□□□□ 0.7
CCDC57-212ENST00000578910 ADAMTS7Q9UKP4 1686 aa19.45■□□□□ 0.7
CCDC57-212ENST00000578910 GRIN3BO60391 1043 aa19.44■□□□□ 0.7
CCDC57-212ENST00000578910 DDX10Q13206 875 aaKnown RBP19.44■□□□□ 0.7
CCDC57-212ENST00000578910 ZNF790Q6PG37 636 aa19.44■□□□□ 0.7
CCDC57-212ENST00000578910 TJP1Q07157 1748 aa19.43■□□□□ 0.7
CCDC57-212ENST00000578910 FKBP8Q14318 412 aa19.43■□□□□ 0.7
CCDC57-212ENST00000578910 ZNF496Q96IT1 587 aaPredicted RBP19.43■□□□□ 0.7
CCDC57-212ENST00000578910 KCNQ3O43525 872 aa19.42■□□□□ 0.7
CCDC57-212ENST00000578910 ZNF784Q8NCA9 323 aaPredicted RBP19.42■□□□□ 0.7
CCDC57-212ENST00000578910 WWC3Q9ULE0 1092 aa19.42■□□□□ 0.7
CCDC57-212ENST00000578910 PARP3Q9Y6F1 533 aa19.42■□□□□ 0.7
CCDC57-212ENST00000578910 KCPQ6ZWJ8 1503 aa19.41■□□□□ 0.7
CCDC57-212ENST00000578910 BTBD11A6QL63 1104 aa19.41■□□□□ 0.7
CCDC57-212ENST00000578910 ZBTB1Q9Y2K1 713 aa19.41■□□□□ 0.7
CCDC57-212ENST00000578910 USP42Q9H9J4 1324 aaKnown RBP19.41■□□□□ 0.7
CCDC57-212ENST00000578910 CEMIPQ8WUJ3 1361 aa19.41■□□□□ 0.7
CCDC57-212ENST00000578910 CHD4Q14839 1912 aa19.41■□□□□ 0.7
CCDC57-212ENST00000578910 CANXP27824 592 aaKnown RBP19.4■□□□□ 0.7
CCDC57-212ENST00000578910 USPL1Q5W0Q7 1092 aa19.4■□□□□ 0.7
CCDC57-212ENST00000578910 MCM10Q7L590 875 aa19.4■□□□□ 0.7
CCDC57-212ENST00000578910 RTF1Q92541 710 aaKnown RBP19.4■□□□□ 0.7
CCDC57-212ENST00000578910 SOS1Q07889 1333 aaPredicted RBP19.4■□□□□ 0.7
CCDC57-212ENST00000578910 ZPR1O75312 459 aa19.39■□□□□ 0.69
CCDC57-212ENST00000578910 STARD3NLO95772 234 aa19.39■□□□□ 0.69
CCDC57-212ENST00000578910 TM4SF1P30408 202 aa19.39■□□□□ 0.69
CCDC57-212ENST00000578910 DCTN1Q14203 1278 aa19.39■□□□□ 0.69
CCDC57-212ENST00000578910 TEX13AQ9BXU3 409 aaPredicted RBP19.39■□□□□ 0.69
CCDC57-212ENST00000578910 GOLGB1Q14789 3259 aaKnown RBP19.38■□□□□ 0.69
CCDC57-212ENST00000578910 A0A0G2JLW4 131 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms