RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 RBM42Q9BTD8 480 aaKnown RBP15.17■□□□□ 0.02
ERBB2-208ENST00000578630 LOC102724428A0A0B4J2F2 783 aa15.16■□□□□ 0.02
ERBB2-208ENST00000578630 SIK1P57059 783 aa15.16■□□□□ 0.02
ERBB2-208ENST00000578630 FAM9BQ8IZU0 186 aa15.16■□□□□ 0.02
ERBB2-208ENST00000578630 TTC5Q8N0Z6 440 aa15.16■□□□□ 0.02
ERBB2-208ENST00000578630 LRRC4BQ9NT99 713 aa15.16■□□□□ 0.02
ERBB2-208ENST00000578630 STK32BQ9NY57 414 aa15.16■□□□□ 0.02
ERBB2-208ENST00000578630 TNS1Q9HBL0 1735 aaKnown RBP15.16■□□□□ 0.02
ERBB2-208ENST00000578630 BTBD11A6QL63 1104 aa15.15■□□□□ 0.02
ERBB2-208ENST00000578630 APAF1O14727 1248 aa15.15■□□□□ 0.02
ERBB2-208ENST00000578630 ATP6V1AP38606 617 aa15.15■□□□□ 0.02
ERBB2-208ENST00000578630 DCTN1Q14203 1278 aa15.15■□□□□ 0.02
ERBB2-208ENST00000578630 TAF7Q15545 349 aaPredicted RBP15.15■□□□□ 0.02
ERBB2-208ENST00000578630 DOT1LQ8TEK3 1739 aa15.14■□□□□ 0.01
ERBB2-208ENST00000578630 CEMIPQ8WUJ3 1361 aa15.14■□□□□ 0.01
ERBB2-208ENST00000578630 PTCD1O75127 700 aaKnown RBP15.14■□□□□ 0.01
ERBB2-208ENST00000578630 RRP7AQ9Y3A4 280 aaKnown RBP15.14■□□□□ 0.01
ERBB2-208ENST00000578630 BTAF1O14981 1849 aa15.13■□□□□ 0.01
ERBB2-208ENST00000578630 KCNQ4P56696 695 aa15.13■□□□□ 0.01
ERBB2-208ENST00000578630 SLC39A6Q13433 755 aa15.13■□□□□ 0.01
ERBB2-208ENST00000578630 SLC15A2Q16348 729 aa15.13■□□□□ 0.01
ERBB2-208ENST00000578630 R3HDM1Q15032 1099 aaKnown RBP15.12■□□□□ 0.01
ERBB2-208ENST00000578630 ZNF790Q6PG37 636 aa15.12■□□□□ 0.01
ERBB2-208ENST00000578630 ITGB4P16144 1822 aa15.11■□□□□ 0.01
ERBB2-208ENST00000578630 MIER1Q8N108 512 aa15.11■□□□□ 0.01
ERBB2-208ENST00000578630 TFCP2L1Q9NZI6 479 aa15.11■□□□□ 0.01
ERBB2-208ENST00000578630 PSDA5PKW4 1024 aaPredicted RBP15.1■□□□□ 0.01
ERBB2-208ENST00000578630 CALD1Q05682 793 aaKnown RBP15.1■□□□□ 0.01
ERBB2-208ENST00000578630 VSIG10Q8N0Z9 540 aa15.1■□□□□ 0.01
ERBB2-208ENST00000578630 FMNL2Q96PY5 1086 aa15.1■□□□□ 0.01
ERBB2-208ENST00000578630 TEX13AQ9BXU3 409 aaPredicted RBP15.1■□□□□ 0.01
ERBB2-208ENST00000578630 TOGARAM1Q9Y4F4 1720 aa15.09■□□□□ 0.01
ERBB2-208ENST00000578630 SCN11AQ9UI33 1791 aa15.09■□□□□ 0.01
ERBB2-208ENST00000578630 NCBP3Q53F19 620 aaKnown RBP15.09■□□□□ 0.01
ERBB2-208ENST00000578630 AKT1S1Q96B36 256 aa15.09■□□□□ 0.01
ERBB2-208ENST00000578630 THUMPD2Q9BTF0 503 aaKnown RBP15.09■□□□□ 0.01
ERBB2-208ENST00000578630 BABAM1Q9NWV8 329 aa15.09■□□□□ 0.01
ERBB2-208ENST00000578630 TRIM35Q9UPQ4 493 aa15.09■□□□□ 0.01
ERBB2-208ENST00000578630 RGPD3A6NKT7 1758 aaPredicted RBP15.08■□□□□ 0.01
ERBB2-208ENST00000578630 RGPD4Q7Z3J3 1758 aa15.08■□□□□ 0.01
ERBB2-208ENST00000578630 ITPK1Q13572 414 aa15.08■□□□□ 0
ERBB2-208ENST00000578630 FLAD1Q8NFF5 587 aa15.08■□□□□ 0
ERBB2-208ENST00000578630 AK7Q96M32 723 aa15.08■□□□□ 0
ERBB2-208ENST00000578630 SLC4A9Q96Q91 983 aa15.08■□□□□ 0
ERBB2-208ENST00000578630 ANO8Q9HCE9 1232 aaPredicted RBP15.08■□□□□ 0
ERBB2-208ENST00000578630 MIS18AQ9NYP9 233 aa15.08■□□□□ 0
ERBB2-208ENST00000578630 STARD3NLO95772 234 aa15.07■□□□□ 0
ERBB2-208ENST00000578630 RC3H1Q5TC82 1133 aaKnown RBP15.07■□□□□ 0
ERBB2-208ENST00000578630 NGEFQ8N5V2 710 aa15.07■□□□□ 0
ERBB2-208ENST00000578630 ZNF496Q96IT1 587 aaPredicted RBP15.07■□□□□ 0
ERBB2-208ENST00000578630 MRC1P22897 1456 aa15.07■□□□□ 0
ERBB2-208ENST00000578630 KCNQ3O43525 872 aa15.06■□□□□ 0
ERBB2-208ENST00000578630 ZNF827Q17R98 1081 aa15.06■□□□□ 0
ERBB2-208ENST00000578630 LINC00116Q8NCU8 138 aa15.06■□□□□ 0
ERBB2-208ENST00000578630 TSPYL4Q9UJ04 414 aa15.06■□□□□ 0
ERBB2-208ENST00000578630 LAS1LQ9Y4W2 734 aaKnown RBP15.06■□□□□ 0
ERBB2-208ENST00000578630 MSH5O43196 834 aa15.05■□□□□ -0
ERBB2-208ENST00000578630 SNRPA1P09661 255 aaKnown RBP15.05■□□□□ -0
ERBB2-208ENST00000578630 CCDC27Q2M243 656 aa15.05■□□□□ -0
ERBB2-208ENST00000578630 DNAJC10Q8IXB1 793 aa15.05■□□□□ -0
ERBB2-208ENST00000578630 ADAMTS7Q9UKP4 1686 aa15.05■□□□□ -0
ERBB2-208ENST00000578630 RTCBQ9Y3I0 505 aaKnown RBP15.04■□□□□ -0
ERBB2-208ENST00000578630 SALL2Q9Y467 1007 aaPredicted RBP15.04■□□□□ -0
ERBB2-208ENST00000578630 LY75O60449 1722 aa15.03■□□□□ -0
ERBB2-208ENST00000578630 RREB1Q92766 1687 aa15.03■□□□□ -0
ERBB2-208ENST00000578630 HEG1Q9ULI3 1381 aa15.03■□□□□ -0
ERBB2-208ENST00000578630 CHL1O00533 1208 aa15.03■□□□□ -0
ERBB2-208ENST00000578630 GNPATO15228 680 aa15.03■□□□□ -0
ERBB2-208ENST00000578630 RPS6KA4O75676 772 aa15.03■□□□□ -0
ERBB2-208ENST00000578630 GNAI1P63096 354 aa15.03■□□□□ -0
ERBB2-208ENST00000578630 TRAPPC3LQ5T215 181 aa15.03■□□□□ -0
ERBB2-208ENST00000578630 WWC1Q8IX03 1113 aa15.03■□□□□ -0
ERBB2-208ENST00000578630 SLC16A10Q8TF71 515 aa15.03■□□□□ -0
ERBB2-208ENST00000578630 CFAP44Q96MT7 982 aa15.03■□□□□ -0
ERBB2-208ENST00000578630 CNTNAP4Q9C0A0 1308 aa15.02■□□□□ -0
ERBB2-208ENST00000578630 CYP19A1P11511 503 aaPredicted RBP15.02■□□□□ -0
ERBB2-208ENST00000578630 SSFA2P28290 1259 aa15.02■□□□□ -0
ERBB2-208ENST00000578630 CRKLP46109 303 aaKnown RBP15.02■□□□□ -0
ERBB2-208ENST00000578630 EIF4A1P60842 406 aaKnown RBP15.02■□□□□ -0
ERBB2-208ENST00000578630 NPM2Q86SE8 214 aaKnown RBP15.02■□□□□ -0
ERBB2-208ENST00000578630 NUP188Q5SRE5 1749 aa15.01□□□□□ -0.01
ERBB2-208ENST00000578630 SENP3-EIF4A1A0A087X0R7 540 aa15.01□□□□□ -0.01
ERBB2-208ENST00000578630 ADRA2BP18089 450 aa15.01□□□□□ -0.01
ERBB2-208ENST00000578630 COL23A1Q86Y22 540 aaPredicted RBP15.01□□□□□ -0.01
ERBB2-208ENST00000578630 CCDC87Q9NVE4 849 aa15.01□□□□□ -0.01
ERBB2-208ENST00000578630 IFT57Q9NWB7 429 aa15.01□□□□□ -0.01
ERBB2-208ENST00000578630 DLG5Q8TDM6 1919 aa15□□□□□ -0.01
ERBB2-208ENST00000578630 PNPLA7Q6ZV29 1317 aa15□□□□□ -0.01
ERBB2-208ENST00000578630 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15□□□□□ -0.01
ERBB2-208ENST00000578630 GIGYF1O75420 1035 aaPredicted RBP15□□□□□ -0.01
ERBB2-208ENST00000578630 PHF14O94880 888 aa15□□□□□ -0.01
ERBB2-208ENST00000578630 WDR63Q8IWG1 891 aa15□□□□□ -0.01
ERBB2-208ENST00000578630 SPON1Q9HCB6 807 aa15□□□□□ -0.01
ERBB2-208ENST00000578630 USP16Q9Y5T5 823 aa15□□□□□ -0.01
ERBB2-208ENST00000578630 RFC4P35249 363 aa14.99□□□□□ -0.01
ERBB2-208ENST00000578630 INTS5Q6P9B9 1019 aaKnown RBP14.99□□□□□ -0.01
ERBB2-208ENST00000578630 VIRMAQ69YN4 1812 aaKnown RBP14.99□□□□□ -0.01
ERBB2-208ENST00000578630 IL16Q14005 1332 aa14.98□□□□□ -0.01
ERBB2-208ENST00000578630 ZNF853P0CG23 659 aa14.98□□□□□ -0.01
ERBB2-208ENST00000578630 CANXP27824 592 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms