RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 LGR6Q9HBX8 967 aa16.8■□□□□ 0.28
CDK5RAP3-203ENST00000577442 STK32BQ9NY57 414 aa16.8■□□□□ 0.28
CDK5RAP3-203ENST00000577442 CEMIPQ8WUJ3 1361 aa16.79■□□□□ 0.28
CDK5RAP3-203ENST00000577442 RUNDC1Q96C34 613 aa16.79■□□□□ 0.28
CDK5RAP3-203ENST00000577442 ATG3Q9NT62 314 aa16.79■□□□□ 0.28
CDK5RAP3-203ENST00000577442 ASAP1Q9ULH1 1129 aa16.79■□□□□ 0.28
CDK5RAP3-203ENST00000577442 ADAMTS8Q9UP79 889 aa16.79■□□□□ 0.28
CDK5RAP3-203ENST00000577442 LRRC4BQ9NT99 713 aa16.78■□□□□ 0.28
CDK5RAP3-203ENST00000577442 SIPA1L3O60292 1781 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-203ENST00000577442 C5P01031 1676 aa16.78■□□□□ 0.28
CDK5RAP3-203ENST00000577442 ZNF831Q5JPB2 1677 aa16.78■□□□□ 0.28
CDK5RAP3-203ENST00000577442 TAF1LQ8IZX4 1826 aa16.77■□□□□ 0.28
CDK5RAP3-203ENST00000577442 LOC102724428A0A0B4J2F2 783 aa16.77■□□□□ 0.28
CDK5RAP3-203ENST00000577442 SIK1P57059 783 aa16.77■□□□□ 0.28
CDK5RAP3-203ENST00000577442 LMOD3Q0VAK6 560 aa16.77■□□□□ 0.28
CDK5RAP3-203ENST00000577442 R3HDM1Q15032 1099 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP3-203ENST00000577442 IL17REQ8NFR9 667 aa16.77■□□□□ 0.28
CDK5RAP3-203ENST00000577442 ANO8Q9HCE9 1232 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP3-203ENST00000577442 CCDC146Q8IYE0 955 aa16.76■□□□□ 0.27
CDK5RAP3-203ENST00000577442 PSDA5PKW4 1024 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-203ENST00000577442 SLC15A2Q16348 729 aa16.75■□□□□ 0.27
CDK5RAP3-203ENST00000577442 CCDC184Q52MB2 194 aa16.75■□□□□ 0.27
CDK5RAP3-203ENST00000577442 TTC5Q8N0Z6 440 aa16.75■□□□□ 0.27
CDK5RAP3-203ENST00000577442 QSER1Q2KHR3 1735 aa16.74■□□□□ 0.27
CDK5RAP3-203ENST00000577442 TMPOP42166 694 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-203ENST00000577442 MCM10Q7L590 875 aa16.74■□□□□ 0.27
CDK5RAP3-203ENST00000577442 RBM42Q9BTD8 480 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-203ENST00000577442 CICQ96RK0 1608 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-203ENST00000577442 ATP6V1AP38606 617 aa16.73■□□□□ 0.27
CDK5RAP3-203ENST00000577442 KCNQ4P56696 695 aa16.73■□□□□ 0.27
CDK5RAP3-203ENST00000577442 RIPK4P57078 832 aa16.73■□□□□ 0.27
CDK5RAP3-203ENST00000577442 PNISRQ8TF01 805 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-203ENST00000577442 UBR2Q8IWV8 1755 aa16.73■□□□□ 0.27
CDK5RAP3-203ENST00000577442 C4BP0C0L5 1744 aa16.73■□□□□ 0.27
CDK5RAP3-203ENST00000577442 PTCD1O75127 700 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-203ENST00000577442 ZNF827Q17R98 1081 aa16.72■□□□□ 0.27
CDK5RAP3-203ENST00000577442 AKT1S1Q96B36 256 aa16.72■□□□□ 0.27
CDK5RAP3-203ENST00000577442 KCPQ6ZWJ8 1503 aa16.71■□□□□ 0.27
CDK5RAP3-203ENST00000577442 SLC39A6Q13433 755 aa16.71■□□□□ 0.27
CDK5RAP3-203ENST00000577442 DCTN1Q14203 1278 aa16.71■□□□□ 0.27
CDK5RAP3-203ENST00000577442 AK7Q96M32 723 aa16.71■□□□□ 0.27
CDK5RAP3-203ENST00000577442 COL5A3P25940 1745 aaPredicted RBP16.7■□□□□ 0.26
CDK5RAP3-203ENST00000577442 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
CDK5RAP3-203ENST00000577442 BTBD11A6QL63 1104 aa16.7■□□□□ 0.26
CDK5RAP3-203ENST00000577442 TAF7Q15545 349 aaPredicted RBP16.7■□□□□ 0.26
CDK5RAP3-203ENST00000577442 DIEXFQ68CQ4 756 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-203ENST00000577442 ZNF790Q6PG37 636 aa16.7■□□□□ 0.26
CDK5RAP3-203ENST00000577442 TFCP2L1Q9NZI6 479 aa16.7■□□□□ 0.26
CDK5RAP3-203ENST00000577442 CASZ1Q86V15 1759 aa16.69■□□□□ 0.26
CDK5RAP3-203ENST00000577442 ITPK1Q13572 414 aa16.69■□□□□ 0.26
CDK5RAP3-203ENST00000577442 VSIG10Q8N0Z9 540 aa16.69■□□□□ 0.26
CDK5RAP3-203ENST00000577442 LINC00116Q8NCU8 138 aa16.69■□□□□ 0.26
CDK5RAP3-203ENST00000577442 RRP7AQ9Y3A4 280 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP3-203ENST00000577442 TJP1Q07157 1748 aa16.69■□□□□ 0.26
CDK5RAP3-203ENST00000577442 UBR3Q6ZT12 1888 aa16.68■□□□□ 0.26
CDK5RAP3-203ENST00000577442 CCER2I3L3R5 266 aa16.68■□□□□ 0.26
CDK5RAP3-203ENST00000577442 NEUROD2Q15784 382 aa16.68■□□□□ 0.26
CDK5RAP3-203ENST00000577442 FLAD1Q8NFF5 587 aa16.68■□□□□ 0.26
CDK5RAP3-203ENST00000577442 FMNL2Q96PY5 1086 aa16.68■□□□□ 0.26
CDK5RAP3-203ENST00000577442 SLC4A9Q96Q91 983 aa16.68■□□□□ 0.26
CDK5RAP3-203ENST00000577442 CNTNAP4Q9C0A0 1308 aa16.68■□□□□ 0.26
CDK5RAP3-203ENST00000577442 APAF1O14727 1248 aa16.67■□□□□ 0.26
CDK5RAP3-203ENST00000577442 HEG1Q9ULI3 1381 aa16.66■□□□□ 0.26
CDK5RAP3-203ENST00000577442 RC3H1Q5TC82 1133 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-203ENST00000577442 THUMPD2Q9BTF0 503 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-203ENST00000577442 KDM3BQ7LBC6 1761 aa16.66■□□□□ 0.26
CDK5RAP3-203ENST00000577442 LRP5O75197 1615 aa16.66■□□□□ 0.26
CDK5RAP3-203ENST00000577442 PNPLA7Q6ZV29 1317 aa16.66■□□□□ 0.26
CDK5RAP3-203ENST00000577442 GNPATO15228 680 aa16.65■□□□□ 0.26
CDK5RAP3-203ENST00000577442 SSFA2P28290 1259 aa16.65■□□□□ 0.26
CDK5RAP3-203ENST00000577442 CALD1Q05682 793 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-203ENST00000577442 ZNF496Q96IT1 587 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-203ENST00000577442 TEX13AQ9BXU3 409 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-203ENST00000577442 BABAM1Q9NWV8 329 aa16.65■□□□□ 0.26
CDK5RAP3-203ENST00000577442 MYH14Q7Z406 1995 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-203ENST00000577442 DNAJC10Q8IXB1 793 aa16.64■□□□□ 0.25
CDK5RAP3-203ENST00000577442 FAM9BQ8IZU0 186 aa16.64■□□□□ 0.25
CDK5RAP3-203ENST00000577442 SLC16A10Q8TF71 515 aa16.64■□□□□ 0.25
CDK5RAP3-203ENST00000577442 TRIM35Q9UPQ4 493 aa16.64■□□□□ 0.25
CDK5RAP3-203ENST00000577442 STARD3NLO95772 234 aa16.63■□□□□ 0.25
CDK5RAP3-203ENST00000577442 CRKLP46109 303 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-203ENST00000577442 TSPYL4Q9UJ04 414 aa16.63■□□□□ 0.25
CDK5RAP3-203ENST00000577442 RTCBQ9Y3I0 505 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-203ENST00000577442 SRCAPQ6ZRS2 3230 aa16.62■□□□□ 0.25
CDK5RAP3-203ENST00000577442 KCNQ3O43525 872 aa16.62■□□□□ 0.25
CDK5RAP3-203ENST00000577442 ADRA2BP18089 450 aa16.62■□□□□ 0.25
CDK5RAP3-203ENST00000577442 NCBP3Q53F19 620 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-203ENST00000577442 MTFR1LQ9H019 292 aa16.62■□□□□ 0.25
CDK5RAP3-203ENST00000577442 SPON1Q9HCB6 807 aa16.62■□□□□ 0.25
CDK5RAP3-203ENST00000577442 CCDC87Q9NVE4 849 aa16.62■□□□□ 0.25
CDK5RAP3-203ENST00000577442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-203ENST00000577442 MSH5O43196 834 aa16.61■□□□□ 0.25
CDK5RAP3-203ENST00000577442 RPS6KA4O75676 772 aa16.61■□□□□ 0.25
CDK5RAP3-203ENST00000577442 SNRPA1P09661 255 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-203ENST00000577442 LAMB4A4D0S4 1761 aa16.6■□□□□ 0.25
CDK5RAP3-203ENST00000577442 PHF14O94880 888 aa16.6■□□□□ 0.25
CDK5RAP3-203ENST00000577442 CYP19A1P11511 503 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-203ENST00000577442 CCDC27Q2M243 656 aa16.6■□□□□ 0.25
CDK5RAP3-203ENST00000577442 COL23A1Q86Y22 540 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-203ENST00000577442 NGEFQ8N5V2 710 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms