RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 USP17L24Q0WX57 530 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 ANKMY2Q8IV38 441 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 DEPDC4Q8N2C3 294 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 DNMT3LQ9UJW3 386 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 NOVA2Q9UNW9 492 aaKnown RBP4.65□□□□□ -1.67
COPS3-213ENST00000577210 MTMR7Q9Y216 660 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 CBLBQ13191 982 aa4.64□□□□□ -1.67
COPS3-213ENST00000577210 PTK7Q13308 1070 aa4.64□□□□□ -1.67
COPS3-213ENST00000577210 CCDC102BQ68D86 513 aa4.64□□□□□ -1.67
COPS3-213ENST00000577210 NBPF15Q8N660 670 aa4.64□□□□□ -1.67
COPS3-213ENST00000577210 ZNF784Q8NCA9 323 aaPredicted RBP4.64□□□□□ -1.67
COPS3-213ENST00000577210 TRAIPQ9BWF2 469 aa4.64□□□□□ -1.67
COPS3-213ENST00000577210 CYLDQ9NQC7 956 aa4.64□□□□□ -1.67
COPS3-213ENST00000577210 SOS2Q07890 1332 aaPredicted RBP4.64□□□□□ -1.67
COPS3-213ENST00000577210 ADH1AP07327 375 aa4.63□□□□□ -1.67
COPS3-213ENST00000577210 VSIG8P0DPA2 414 aa4.63□□□□□ -1.67
COPS3-213ENST00000577210 Q6ZVU0 165 aa4.63□□□□□ -1.67
COPS3-213ENST00000577210 GAS2L2Q8NHY3 880 aa4.63□□□□□ -1.67
COPS3-213ENST00000577210 TSEN34Q9BSV6 310 aaKnown RBP4.63□□□□□ -1.67
COPS3-213ENST00000577210 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.63□□□□□ -1.67
COPS3-213ENST00000577210 CHMP3Q9Y3E7 222 aa4.63□□□□□ -1.67
COPS3-213ENST00000577210 PPFIA3O75145 1194 aa4.62□□□□□ -1.67
COPS3-213ENST00000577210 GPC1P35052 558 aa4.62□□□□□ -1.67
COPS3-213ENST00000577210 ZSCAN1Q8NBB4 408 aa4.62□□□□□ -1.67
COPS3-213ENST00000577210 TPCN2Q8NHX9 752 aa4.62□□□□□ -1.67
COPS3-213ENST00000577210 NLRP3Q96P20 1036 aa4.62□□□□□ -1.67
COPS3-213ENST00000577210 PCDHGA11Q9Y5H2 935 aa4.62□□□□□ -1.67
COPS3-213ENST00000577210 LILRA1O75019 489 aa4.61□□□□□ -1.67
COPS3-213ENST00000577210 BRD1O95696 1058 aa4.61□□□□□ -1.67
COPS3-213ENST00000577210 INHAP05111 366 aa4.61□□□□□ -1.67
COPS3-213ENST00000577210 GDF10P55107 478 aa4.61□□□□□ -1.67
COPS3-213ENST00000577210 CLDN10P78369 228 aa4.61□□□□□ -1.67
COPS3-213ENST00000577210 DPYDQ12882 1025 aa4.61□□□□□ -1.67
COPS3-213ENST00000577210 TSGA10IPQ3SY00 556 aa4.61□□□□□ -1.67
COPS3-213ENST00000577210 CRTC2Q53ET0 693 aaPredicted RBP4.61□□□□□ -1.67
COPS3-213ENST00000577210 RETREG2Q8NC44 543 aa4.61□□□□□ -1.67
COPS3-213ENST00000577210 CLP1Q92989 425 aaKnown RBP4.61□□□□□ -1.67
COPS3-213ENST00000577210 ZNF594Q96JF6 807 aaPredicted RBP4.61□□□□□ -1.67
COPS3-213ENST00000577210 AGBL1Q96MI9 1066 aa4.61□□□□□ -1.67
COPS3-213ENST00000577210 OSBPL3Q9H4L5 887 aa4.61□□□□□ -1.67
COPS3-213ENST00000577210 TMPRSS4Q9NRS4 437 aa4.61□□□□□ -1.67
COPS3-213ENST00000577210 ZBTB7CA1YPR0 619 aa4.6□□□□□ -1.67
COPS3-213ENST00000577210 FIGNL2A6NMB9 653 aa4.6□□□□□ -1.67
COPS3-213ENST00000577210 TTLL8A6PVC2 850 aa4.6□□□□□ -1.67
COPS3-213ENST00000577210 PTGIRP43119 386 aa4.6□□□□□ -1.67
COPS3-213ENST00000577210 SCTRP47872 440 aa4.6□□□□□ -1.67
COPS3-213ENST00000577210 CLN3Q13286 438 aa4.6□□□□□ -1.67
COPS3-213ENST00000577210 CDCA8Q53HL2 280 aa4.6□□□□□ -1.67
COPS3-213ENST00000577210 SLC4A9Q96Q91 983 aa4.6□□□□□ -1.67
COPS3-213ENST00000577210 ESYT1Q9BSJ8 1104 aa4.6□□□□□ -1.67
COPS3-213ENST00000577210 ZBTB7BO15156 539 aaPredicted RBP4.59□□□□□ -1.67
COPS3-213ENST00000577210 SPINT1O43278 529 aa4.59□□□□□ -1.67
COPS3-213ENST00000577210 RELBQ01201 579 aa4.59□□□□□ -1.67
COPS3-213ENST00000577210 KRT76Q01546 638 aa4.59□□□□□ -1.67
COPS3-213ENST00000577210 PTSQ03393 145 aa4.59□□□□□ -1.67
COPS3-213ENST00000577210 KCNA1Q09470 495 aa4.59□□□□□ -1.67
COPS3-213ENST00000577210 VTI1AQ96AJ9 217 aa4.59□□□□□ -1.67
COPS3-213ENST00000577210 XAGE2Q96GT9 111 aa4.59□□□□□ -1.67
COPS3-213ENST00000577210 HINFPQ9BQA5 517 aa4.59□□□□□ -1.67
COPS3-213ENST00000577210 CDK2AP1O14519 115 aa4.58□□□□□ -1.68
COPS3-213ENST00000577210 PTCD1O75127 700 aaKnown RBP4.58□□□□□ -1.68
COPS3-213ENST00000577210 CTSOP43234 321 aaPredicted RBP4.58□□□□□ -1.68
COPS3-213ENST00000577210 SMTNP53814 917 aa4.58□□□□□ -1.68
COPS3-213ENST00000577210 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.58□□□□□ -1.68
COPS3-213ENST00000577210 GNASQ5JWF2 1037 aa4.58□□□□□ -1.68
COPS3-213ENST00000577210 TMEM164Q5U3C3 297 aa4.58□□□□□ -1.68
COPS3-213ENST00000577210 STAG2Q8N3U4 1231 aa4.58□□□□□ -1.68
COPS3-213ENST00000577210 GPR161Q8N6U8 529 aaKnown RBP4.58□□□□□ -1.68
COPS3-213ENST00000577210 C1orf216Q8TAB5 229 aa4.58□□□□□ -1.68
COPS3-213ENST00000577210 CCER1Q8TC90 406 aaPredicted RBP4.58□□□□□ -1.68
COPS3-213ENST00000577210 CNKSR1Q969H4 720 aa4.58□□□□□ -1.68
COPS3-213ENST00000577210 INSM2Q96T92 566 aaPredicted RBP4.58□□□□□ -1.68
COPS3-213ENST00000577210 ARHGEF10LQ9HCE6 1279 aa4.58□□□□□ -1.68
COPS3-213ENST00000577210 ZNF358Q9NW07 568 aa4.58□□□□□ -1.68
COPS3-213ENST00000577210 A0A1W2PRU2 124 aa4.57□□□□□ -1.68
COPS3-213ENST00000577210 FOXO3O43524 673 aa4.57□□□□□ -1.68
COPS3-213ENST00000577210 IGFBP4P22692 258 aa4.57□□□□□ -1.68
COPS3-213ENST00000577210 ARID4AP29374 1257 aaPredicted RBP4.57□□□□□ -1.68
COPS3-213ENST00000577210 ADD1P35611 737 aaKnown RBP4.57□□□□□ -1.68
COPS3-213ENST00000577210 SCNN1DP51172 638 aa4.57□□□□□ -1.68
COPS3-213ENST00000577210 MTFR1Q15390 333 aa4.57□□□□□ -1.68
COPS3-213ENST00000577210 TLR1Q15399 786 aa4.57□□□□□ -1.68
COPS3-213ENST00000577210 HIF1AQ16665 826 aa4.57□□□□□ -1.68
COPS3-213ENST00000577210 WDR44Q5JSH3 913 aa4.57□□□□□ -1.68
COPS3-213ENST00000577210 COL26A1Q96A83 441 aa4.57□□□□□ -1.68
COPS3-213ENST00000577210 ZNF395Q9H8N7 513 aaPredicted RBP4.57□□□□□ -1.68
COPS3-213ENST00000577210 ZMIZ1Q9ULJ6 1067 aa4.57□□□□□ -1.68
COPS3-213ENST00000577210 A6NJY4 79 aa4.56□□□□□ -1.68
COPS3-213ENST00000577210 TMEM88BA6NKF7 163 aa4.56□□□□□ -1.68
COPS3-213ENST00000577210 TMEM229AB2RXF0 380 aa4.56□□□□□ -1.68
COPS3-213ENST00000577210 MEN1O00255 615 aa4.56□□□□□ -1.68
COPS3-213ENST00000577210 DKK1O94907 266 aa4.56□□□□□ -1.68
COPS3-213ENST00000577210 ATP2B4P23634 1241 aa4.56□□□□□ -1.68
COPS3-213ENST00000577210 RNF144AP50876 292 aaPredicted RBP4.56□□□□□ -1.68
COPS3-213ENST00000577210 PSMA6P60900 246 aaKnown RBP4.56□□□□□ -1.68
COPS3-213ENST00000577210 SLC27A3Q5K4L6 730 aa4.56□□□□□ -1.68
COPS3-213ENST00000577210 TMEM214Q6NUQ4 689 aaKnown RBP4.56□□□□□ -1.68
COPS3-213ENST00000577210 CCDC155Q8N6L0 562 aa4.56□□□□□ -1.68
COPS3-213ENST00000577210 KDF1Q8NAX2 398 aaPredicted RBP4.56□□□□□ -1.68
COPS3-213ENST00000577210 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms