RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 TIMELESSQ9UNS1 1208 aa16.59■□□□□ 0.25
PRPF8-215ENST00000576958 CD2APQ9Y5K6 639 aa16.59■□□□□ 0.25
PRPF8-215ENST00000576958 COL5A3P25940 1745 aaPredicted RBP16.59■□□□□ 0.25
PRPF8-215ENST00000576958 EIF4G2P78344 907 aaKnown RBP eCLIP16.58■□□□□ 0.24
PRPF8-215ENST00000576958 ZNF526Q8TF50 670 aaPredicted RBP16.58■□□□□ 0.24
PRPF8-215ENST00000576958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.58■□□□□ 0.24
PRPF8-215ENST00000576958 MYH14Q7Z406 1995 aaKnown RBP16.58■□□□□ 0.24
PRPF8-215ENST00000576958 N4BP2Q86UW6 1770 aaPredicted RBP16.57■□□□□ 0.24
PRPF8-215ENST00000576958 GIGYF1O75420 1035 aaPredicted RBP16.57■□□□□ 0.24
PRPF8-215ENST00000576958 SSFA2P28290 1259 aa16.57■□□□□ 0.24
PRPF8-215ENST00000576958 FLAD1Q8NFF5 587 aa16.57■□□□□ 0.24
PRPF8-215ENST00000576958 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
PRPF8-215ENST00000576958 CICQ96RK0 1608 aaPredicted RBP16.56■□□□□ 0.24
PRPF8-215ENST00000576958 MMP10P09238 476 aa16.56■□□□□ 0.24
PRPF8-215ENST00000576958 ZNF530Q6P9A1 599 aaPredicted RBP16.56■□□□□ 0.24
PRPF8-215ENST00000576958 C4AP0C0L4 1744 aa16.55■□□□□ 0.24
PRPF8-215ENST00000576958 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
PRPF8-215ENST00000576958 ADCY9O60503 1353 aa16.54■□□□□ 0.24
PRPF8-215ENST00000576958 CLSPNQ9HAW4 1339 aa16.54■□□□□ 0.24
PRPF8-215ENST00000576958 GRIN3BO60391 1043 aa16.54■□□□□ 0.24
PRPF8-215ENST00000576958 MORC1Q86VD1 984 aa16.54■□□□□ 0.24
PRPF8-215ENST00000576958 TJP1Q07157 1748 aa16.53■□□□□ 0.24
PRPF8-215ENST00000576958 PTCD1O75127 700 aaKnown RBP16.53■□□□□ 0.24
PRPF8-215ENST00000576958 CCER1Q8TC90 406 aaPredicted RBP16.53■□□□□ 0.24
PRPF8-215ENST00000576958 ARHGEF1Q92888 912 aaKnown RBP16.53■□□□□ 0.24
PRPF8-215ENST00000576958 IL13P35225 146 aa16.52■□□□□ 0.24
PRPF8-215ENST00000576958 SULT6B1Q6IMI4 303 aa16.52■□□□□ 0.24
PRPF8-215ENST00000576958 SRP68Q9UHB9 627 aaKnown RBP16.52■□□□□ 0.24
PRPF8-215ENST00000576958 KIF13BQ9NQT8 1826 aa16.52■□□□□ 0.23
PRPF8-215ENST00000576958 A0A0G2JLW4 131 aa16.51■□□□□ 0.23
PRPF8-215ENST00000576958 ERVV-2B6SEH9 535 aa16.51■□□□□ 0.23
PRPF8-215ENST00000576958 PLEKHO1Q53GL0 409 aaPredicted RBP16.51■□□□□ 0.23
PRPF8-215ENST00000576958 NFATC2IPQ8NCF5 419 aa16.51■□□□□ 0.23
PRPF8-215ENST00000576958 DCAF5Q96JK2 942 aa16.51■□□□□ 0.23
PRPF8-215ENST00000576958 KIF7Q2M1P5 1343 aa16.5■□□□□ 0.23
PRPF8-215ENST00000576958 ZNF831Q5JPB2 1677 aa16.5■□□□□ 0.23
PRPF8-215ENST00000576958 GYS1P13807 737 aa16.5■□□□□ 0.23
PRPF8-215ENST00000576958 CABP4P57796 275 aa16.5■□□□□ 0.23
PRPF8-215ENST00000576958 CNGB1Q14028 1251 aaPredicted RBP16.5■□□□□ 0.23
PRPF8-215ENST00000576958 AMER1Q5JTC6 1135 aaPredicted RBP16.5■□□□□ 0.23
PRPF8-215ENST00000576958 LGR6Q9HBX8 967 aa16.5■□□□□ 0.23
PRPF8-215ENST00000576958 SCN11AQ9UI33 1791 aa16.49■□□□□ 0.23
PRPF8-215ENST00000576958 MTHFSP49914 203 aa16.49■□□□□ 0.23
PRPF8-215ENST00000576958 TRAPPC3LQ5T215 181 aa16.49■□□□□ 0.23
PRPF8-215ENST00000576958 C10orf71Q711Q0 1435 aa16.49■□□□□ 0.23
PRPF8-215ENST00000576958 RTCBQ9Y3I0 505 aaKnown RBP16.49■□□□□ 0.23
PRPF8-215ENST00000576958 ADAMTS7Q9UKP4 1686 aa16.49■□□□□ 0.23
PRPF8-215ENST00000576958 HMOX1P09601 288 aa16.48■□□□□ 0.23
PRPF8-215ENST00000576958 CNTNAP4Q9C0A0 1308 aa16.47■□□□□ 0.23
PRPF8-215ENST00000576958 RPS6KA4O75676 772 aa16.47■□□□□ 0.23
PRPF8-215ENST00000576958 DPEP1P16444 411 aa16.47■□□□□ 0.23
PRPF8-215ENST00000576958 CRKLP46109 303 aaKnown RBP16.47■□□□□ 0.23
PRPF8-215ENST00000576958 SLC39A6Q13433 755 aa16.47■□□□□ 0.23
PRPF8-215ENST00000576958 VIRMAQ69YN4 1812 aaKnown RBP16.47■□□□□ 0.23
PRPF8-215ENST00000576958 DDR1Q08345 913 aa16.46■□□□□ 0.23
PRPF8-215ENST00000576958 FKBP8Q14318 412 aa16.46■□□□□ 0.23
PRPF8-215ENST00000576958 GPBP1L1Q9HC44 474 aaPredicted RBP16.46■□□□□ 0.23
PRPF8-215ENST00000576958 KNSTRNQ9Y448 316 aa16.46■□□□□ 0.23
PRPF8-215ENST00000576958 BRCA1P38398 1863 aaKnown RBP16.46■□□□□ 0.22
PRPF8-215ENST00000576958 AMOTQ4VCS5 1084 aa16.45■□□□□ 0.22
PRPF8-215ENST00000576958 C1orf141Q5JVX7 400 aa16.45■□□□□ 0.22
PRPF8-215ENST00000576958 CC2D1BQ5T0F9 858 aaKnown RBP16.45■□□□□ 0.22
PRPF8-215ENST00000576958 INTS5Q6P9B9 1019 aaKnown RBP16.45■□□□□ 0.22
PRPF8-215ENST00000576958 DNAJC10Q8IXB1 793 aa16.45■□□□□ 0.22
PRPF8-215ENST00000576958 BCS1LQ9Y276 419 aa16.45■□□□□ 0.22
PRPF8-215ENST00000576958 PLEKHG2Q9H7P9 1386 aa16.44■□□□□ 0.22
PRPF8-215ENST00000576958 HSP90AB1P08238 724 aaKnown RBP16.44■□□□□ 0.22
PRPF8-215ENST00000576958 KCNA3P22001 575 aa16.44■□□□□ 0.22
PRPF8-215ENST00000576958 RFC4P35249 363 aa16.44■□□□□ 0.22
PRPF8-215ENST00000576958 RC3H1Q5TC82 1133 aaKnown RBP16.44■□□□□ 0.22
PRPF8-215ENST00000576958 KCPQ6ZWJ8 1503 aa16.43■□□□□ 0.22
PRPF8-215ENST00000576958 KIF3CO14782 793 aa16.42■□□□□ 0.22
PRPF8-215ENST00000576958 PER1O15534 1290 aaPredicted RBP16.42■□□□□ 0.22
PRPF8-215ENST00000576958 MTHFSDQ2M296 383 aaKnown RBP16.42■□□□□ 0.22
PRPF8-215ENST00000576958 NLGN1Q8N2Q7 840 aa16.42■□□□□ 0.22
PRPF8-215ENST00000576958 USP42Q9H9J4 1324 aaKnown RBP16.42■□□□□ 0.22
PRPF8-215ENST00000576958 CHRNA5P30532 468 aa16.41■□□□□ 0.22
PRPF8-215ENST00000576958 SLC52A2Q9HAB3 445 aa16.41■□□□□ 0.22
PRPF8-215ENST00000576958 COL3A1P02461 1466 aaPredicted RBP16.41■□□□□ 0.22
PRPF8-215ENST00000576958 MRC1P22897 1456 aa16.41■□□□□ 0.22
PRPF8-215ENST00000576958 RNMTO43148 476 aaKnown RBP16.4■□□□□ 0.22
PRPF8-215ENST00000576958 ADRA2BP18089 450 aa16.4■□□□□ 0.22
PRPF8-215ENST00000576958 FCHSD2O94868 740 aa16.39■□□□□ 0.21
PRPF8-215ENST00000576958 AKAP4Q5JQC9 854 aa16.39■□□□□ 0.21
PRPF8-215ENST00000576958 USPL1Q5W0Q7 1092 aa16.39■□□□□ 0.21
PRPF8-215ENST00000576958 ARHGAP27Q6ZUM4 889 aa16.39■□□□□ 0.21
PRPF8-215ENST00000576958 CCDC87Q9NVE4 849 aa16.39■□□□□ 0.21
PRPF8-215ENST00000576958 PARP3Q9Y6F1 533 aa16.39■□□□□ 0.21
PRPF8-215ENST00000576958 POLRMTO00411 1230 aaKnown RBP16.38■□□□□ 0.21
PRPF8-215ENST00000576958 HMGB2P26583 209 aaKnown RBP16.38■□□□□ 0.21
PRPF8-215ENST00000576958 TGFB2P61812 414 aa16.38■□□□□ 0.21
PRPF8-215ENST00000576958 NMRK2Q9NPI5 230 aa16.38■□□□□ 0.21
PRPF8-215ENST00000576958 ZBTB1Q9Y2K1 713 aa16.38■□□□□ 0.21
PRPF8-215ENST00000576958 AFDNP55196 1824 aaKnown RBP16.38■□□□□ 0.21
PRPF8-215ENST00000576958 CYP19A1P11511 503 aaPredicted RBP16.37■□□□□ 0.21
PRPF8-215ENST00000576958 BCL2L12Q9HB09 334 aa16.37■□□□□ 0.21
PRPF8-215ENST00000576958 SOS1Q07889 1333 aaPredicted RBP16.37■□□□□ 0.21
PRPF8-215ENST00000576958 UBR2Q8IWV8 1755 aa16.36■□□□□ 0.21
PRPF8-215ENST00000576958 ARFGEF1Q9Y6D6 1849 aa16.35■□□□□ 0.21
PRPF8-215ENST00000576958 TM4SF1P30408 202 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms